mRNA_H-canaliculatus_M_contigs8309.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE4_ECTSI) HSP 1 Score: 179 bits (454), Expect = 6.090e-56 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 1
Query: 1 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFT GDGTGGESIYGRTFPDENFELSHTGPGILSM +
Sbjct: 32 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMAN 118
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR31_9PHAE) HSP 1 Score: 179 bits (454), Expect = 2.760e-55 Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 1
Query: 1 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFT GDGTGGESIYGRTFPDENFELSHTGPGILSM +
Sbjct: 81 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMAN 167
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: peptidyl-prolyl (cis-trans isomerase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB95F6) HSP 1 Score: 145 bits (367), Expect = 6.530e-43 Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 1
Query: 1 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
+GRIT+ELRADVVPKTAENFR LCTGE +KGS FHR+IPQFMCQGGDFTRGDGTGG SIYG F DENF+L HTGPGILSM +
Sbjct: 17 IGRITMELRADVVPKTAENFRALCTGEKGKNTYKGSTFHRVIPQFMCQGGDFTRGDGTGGVSIYGAKFEDENFKLQHTGPGILSMAN 103
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=2 Tax=Deuterostomia TaxID=33511 RepID=A0A6P4Z4W5_BRABE) HSP 1 Score: 145 bits (366), Expect = 9.270e-43 Identity = 68/87 (78.16%), Postives = 76/87 (87.36%), Query Frame = 1
Query: 1 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
+GRIT+ELRADVVPKTAENFR LCTGE G+KGS FHR+IPQFMCQGGDFTRG+GTGG+SIYG F DENF+L HTGPGILSM +
Sbjct: 17 LGRITMELRADVVPKTAENFRALCTGEKGF-GYKGSSFHRVIPQFMCQGGDFTRGNGTGGKSIYGEKFADENFQLKHTGPGILSMAN 102
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0W9_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.040e-42 Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 1
Query: 1 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
+GR+ + LR D+VPKTAENFRQLCTGE + G++GS FHR+IP+FMCQGGDFT G+GTGGESIYGRTFPDENF L H+GPGILSM +
Sbjct: 8 LGRVVMVLRKDIVPKTAENFRQLCTGESGI-GYRGSTFHRVIPKFMCQGGDFTEGNGTGGESIYGRTFPDENFTLKHSGPGILSMAN 93
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: PPIF (protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EPF0_BRALA) HSP 1 Score: 143 bits (361), Expect = 5.490e-42 Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = 1
Query: 1 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
+GR+ +ELR DVVPKTAENFR LCTGE + G+KGS FHR+IPQFMCQGGDFT+G+GTGG+SIYG FPDENF+L HTGPG+LSM +
Sbjct: 17 LGRVVMELRPDVVPKTAENFRALCTGEKDM-GYKGSAFHRVIPQFMCQGGDFTKGNGTGGKSIYGEKFPDENFQLKHTGPGVLSMAN 102
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN2_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.020e-41 Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 4 GRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
GR+ +ELRADVVPKTAENFRQLCTGE G+KGS FHRIIPQFMCQGGDFT G+GTGG+SIYG F DENFEL HTGPG+LSM +
Sbjct: 39 GRVVMELRADVVPKTAENFRQLCTGEKGF-GYKGSSFHRIIPQFMCQGGDFTNGNGTGGKSIYGSKFDDENFELKHTGPGVLSMAN 123
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVQ6_FISSO) HSP 1 Score: 142 bits (357), Expect = 1.600e-41 Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 1
Query: 1 MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
+GRI +ELRAD+VPKTAENFRQLCTGE P G+KGS FHR+IP FMCQGGDFT +GTGG+SIYG FPDENF+L+HTGPGILSM +
Sbjct: 8 VGRIVMELRADIVPKTAENFRQLCTGE-PGFGYKGSSFHRVIPGFMCQGGDFTNHNGTGGKSIYGGKFPDENFKLTHTGPGILSMAN 93
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W4U3_9CHLR) HSP 1 Score: 142 bits (357), Expect = 2.160e-41 Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 4 GRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
GRI +EL ADVVPKTAENFRQLCT P GFKGSKFHRIIP FMCQGGDFTRG+GTGG+SIYG+ FPDENFEL HT PGILSM +
Sbjct: 19 GRIVMELFADVVPKTAENFRQLCT-HVPGFGFKGSKFHRIIPDFMCQGGDFTRGNGTGGKSIYGQKFPDENFELQHTEPGILSMAN 103
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HTG9_9CYAN) HSP 1 Score: 142 bits (357), Expect = 2.820e-41 Identity = 69/92 (75.00%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 4 GRITLELRADVVPKTAENFRQLCTGE------GPVKGFKGSKFHRIIPQFMCQGGDFTRGDGTGGESIYGRTFPDENFELSHTGPGILSMVS 261
GRI +ELR DV P+TAENFR LCTGE G FKGS FHRIIP FMCQGGDFTRG+GTGGESIYGRTF DENFEL HTGPGILSM +
Sbjct: 21 GRIVIELRTDVTPQTAENFRALCTGEQGTGASGKPLHFKGSSFHRIIPDFMCQGGDFTRGNGTGGESIYGRTFADENFELKHTGPGILSMAN 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8309.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8309.1.1 >prot_H-canaliculatus_M_contigs8309.1.1 ID=prot_H-canaliculatus_M_contigs8309.1.1|Name=mRNA_H-canaliculatus_M_contigs8309.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=87bp MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGback to top mRNA from alignment at H-canaliculatus_M_contigs8309:3238..4941+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8309.1.1 ID=mRNA_H-canaliculatus_M_contigs8309.1.1|Name=mRNA_H-canaliculatus_M_contigs8309.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1704bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8309:3238..4941+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8309:3238..4941+ >mRNA_H-canaliculatus_M_contigs8309.1.1 ID=mRNA_H-canaliculatus_M_contigs8309.1.1|Name=mRNA_H-canaliculatus_M_contigs8309.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=261bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8309:3238..4941+ (Hapterophycus canaliculatus Oshoro7m male)back to top |