mRNA_H-canaliculatus_M_contigs8035.1.3 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8035.1.3
Unique NamemRNA_H-canaliculatus_M_contigs8035.1.3
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: ABC (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ7_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 7.530e-118
Identity = 181/238 (76.05%), Postives = 212/238 (89.08%), Query Frame = 1
Query:   10 PRGSGARVQVDFRFHNICLSVEVSKAKAALMGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQ 723
            P+ +   +QVDFRF ++  SVEVS+ KA+LMGG+AG K++L+GVSG V+SGQILAIIG SGAGKTSLLDV VGKV AGT+GL +TG++TVNG+ MS+SFFLENAAYVPQEDRLWSALTVRENLMFACK+Y P +S+ +  KRVD+V+ASLGL+GCQH K+GN  +KGVSGGQKRRTSIG+ELVV RKILFLDEPTSGLDAASAS+IMALL  LASETG+IIITSVHQPS+RVFNSFDQ
Sbjct:   62 PKPTTFTLQVDFRFRDVRYSVEVSQTKASLMGGEAGVKQILKGVSGGVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGEVTVNGKTMSKSFFLENAAYVPQEDRLWSALTVRENLMFACKMYSPALSRGECNKRVDKVLASLGLEGCQHIKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKHLASETGVIIITSVHQPSSRVFNSFDQ 299          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: ATP-binding (cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K1_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 3.490e-117
Identity = 179/244 (73.36%), Postives = 207/244 (84.84%), Query Frame = 1
Query:    1 LCRPRGSGARVQVDFRFHNICLSVEVSKAKAALMGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQASI 732
            L +PR S    +VD RF ++  SVEVSK KA+LMGG+AG K +LRGVSGAV+SGQILAIIG SGAGKTSLLDV VGKV A T+GL++TGD+ VNG+ MS+SFFLENAAYVPQEDRLWSALTVRENL FACK+Y P +S+ +  KRVDEV+ SLGL+GCQHTK+GN  +KG SGG+KRRTSIG+ELV  RKILFLDEPTSGLDA SAS+IM LL  LAS+TGMIIITSVHQPS+RVFNSFDQ  +
Sbjct:   54 LGKPRNSPDEPKVDLRFRDVRYSVEVSKTKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSARTKGLNITGDVNVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMLSRGECSKRVDEVLVSLGLEGCQHTKVGNIFLKGTSGGEKRRTSIGVELVFLRKILFLDEPTSGLDAGSASEIMDLLRGLASDTGMIIITSVHQPSSRVFNSFDQVML 297          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U6_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 1.750e-116
Identity = 184/253 (72.73%), Postives = 214/253 (84.58%), Query Frame = 1
Query:    1 LCRPRGSGARVQVDFRFHNICLSVEVSKAKAALMGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQASIQSVLSSCLR 759
            L +P  S    +VDFRF ++  SVEVSK KA+LMGG+AG K +L GVSGAV+SGQILAIIG SGAGKTSLLDV VGKV AGT+GL +TGD+TVNG+ MS+SFFLENAAYVPQEDRLWSALTVRENL FACK+Y P +S+   +KRV++V+ASLGL+GCQHTK+GN  +KG+SGGQKRRTSIG+ELVV RKILFLDEPTSGLDAASAS+IM+LL RLASET +III SVHQPS+RVFNSFDQ     V  + LR
Sbjct:   24 LSKPWKSPGDQKVDFRFRDVRFSVEVSKMKASLMGGEAGVKHILGGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETDVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLR 276          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ8_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 4.930e-112
Identity = 180/230 (78.26%), Postives = 204/230 (88.70%), Query Frame = 1
Query:   37 VDFRFHNICLSVEVSKAKAALMGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKI-GNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQ 723
            VDFRF ++  SVEVSK KA+LMGGKAG K +LRGVSGAV+SGQILAIIGPSGAGKTSLLDV VGK+ AGT+GL VTGDITVNG+ MS+SFFLENAAYVPQEDRLWSALTVRENL FACK+Y P MS+++  KRV +V+A LGL+GCQHTK+ GN  ++G SGGQKRRTSIG+ELV  RKILFLDEPTSGLDAASAS+IM LL  LAS+TGMIII+SVHQPS+RVFNSFDQ
Sbjct:    4 VDFRFRDVRYSVEVSKTKASLMGGKAGVKHILRGVSGAVESGQILAIIGPSGAGKTSLLDVLVGKISAGTKGLDVTGDITVNGKVMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMMSREECNKRVGKVLARLGLEGCQHTKVVGNVFLRGTSGGQKRRTSIGVELVFQRKILFLDEPTSGLDAASASEIMDLLSGLASDTGMIIISSVHQPSSRVFNSFDQ 233          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: ATP (transporter, putative MET type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W0_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 3.980e-105
Identity = 162/208 (77.88%), Postives = 185/208 (88.94%), Query Frame = 1
Query:  100 MGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQ 723
            MGG AG KK+LRGVSGAV+SGQILAIIG SG+GKTSLLDV VG++   T+GL +TG++TVNG+ MS+SFFLENAAYVPQEDRLWSALTVRENLM ACK+Y P MS+ + + RVDEV+ SLGL+ CQHTK+GN  +KG+SGGQKRRTSIG+ELVV RKILFLDEPTSGLDAASAS IM LL RLASETG+IIITSVHQPS+RVFNSFDQ
Sbjct:    1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLHITGNVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLMLACKMYIPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQ 208          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: Hypothetical (protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIS1_9EUKA)

HSP 1 Score: 218 bits (556), Expect = 6.380e-65
Identity = 123/243 (50.62%), Postives = 162/243 (66.67%), Query Frame = 1
Query:   31 VQVDFRFHNICLSVEVSKAKAALM--GGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQASIQSVLSSC 753
            V+  FRF N+ + V V K   A    G     K +LRG+SG V SGQ+LAIIG SG+GKT+LLD     +     G  +TG + VNG P+S++FF    AYV Q+DRLW ALTV ENL  A KLY P++S  +R  +++EV+ + GL  CQ TK+GN LIKG+SGGQ+RR SI +EL+    ILFLDEPTSGLD+ SA++IM LLG LA +  ++II S+HQPS+R F +FD   + S   +C
Sbjct:   83 VKFCFRFTNVKVKVAVPKWMPAFSTPGVPGQTKHILRGISGTVHSGQVLAIIGASGSGKTTLLDQL--SLMPMMPGGKMTGRVEVNGCPVSQAFFKSKCAYVNQDDRLWGALTVFENLEIASKLYEPKLSSIKRRGKIEEVLRATGLLSCQQTKVGNALIKGISGGQRRRVSIAVELMGSPAILFLDEPTSGLDSKSAAEIMQLLGLLAKDLNVLIICSIHQPSSRTFFAFDLILLLSKGRAC 323          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YAG1_9EUKA)

HSP 1 Score: 213 bits (541), Expect = 2.890e-61
Identity = 112/227 (49.34%), Postives = 156/227 (68.72%), Query Frame = 1
Query:   46 RFHNICLSVEVSK--AKAALMGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFD 720
            RF +I +SV V     + A  G     K++L+G+SG+  SG++LAIIG SG+GKT+LLD    +      G   +G +TVN +PM+  FF  + AYV Q+DRLW ALTV ENL  A KLY P +S ++R+ R++ ++ + GL  C+HTK+GN LIKG+SGGQ+RR SI +EL+    ILFLDEPTSGLD+ SA++IM LL ++A    ++I+ S+HQPSTR F +FD
Sbjct:   49 RFEDIRVSVSVPSWMPEFATPGVPGQTKQILKGISGSASSGEVLAIIGASGSGKTTLLDQLAHQPLM--SGGEFSGTLTVNEQPMTNKFFKAHCAYVHQDDRLWGALTVYENLENAAKLYSPNISAEERKDRIEMILEATGLQSCKHTKVGNVLIKGISGGQRRRVSIAVELMGSPAILFLDEPTSGLDSKSAAEIMELLNQIAKRLNVLIVCSIHQPSTRTFLAFD 273          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: Hypothetical (protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QS61_9CHLO)

HSP 1 Score: 203 bits (516), Expect = 1.170e-57
Identity = 106/232 (45.69%), Postives = 156/232 (67.24%), Query Frame = 1
Query:   49 FHNICLSVEVSKAKAALMGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKA-GTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRK-ILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQASIQS 738
            F N+   ++V+K    L GGK G +++L+ VSG V SGQ++AIIGPSGAGKT+LLD    +        ++V+G + V+GE MS+ FF E  AY+PQ+D L +ALT +E+L ++ +LYG  ++ D+ E      +  LGL GC    +G+  I+G+SGGQKRR S+  EL+   K I FLDEPTSGLDAA+A++IM ++ + A +  ++++ SVHQPS+RVF +FDQ  + S
Sbjct:   43 FDNLTFDIKVTKLGTFLHGGKVGVRRILQDVSGRVASGQVMAIIGPSGAGKTTLLDTLASQPHVVNNNNITVSGVVAVDGEKMSKDFFSERCAYLPQQDALCTALTTKEHLAYSARLYG--VASDELESNCTTTMKDLGLTGCADVMVGSVFIRGLSGGQKRRLSLACELIAGNKAIYFLDEPTSGLDAAAATEIMKVVTQAAKQRNVVMVASVHQPSSRVFYAFDQLLVLS 272          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHB7_9STRA)

HSP 1 Score: 202 bits (513), Expect = 6.780e-57
Identity = 107/231 (46.32%), Postives = 153/231 (66.23%), Query Frame = 1
Query:   40 DFRFHNICLSVEVSKAKAALMGGKAGAKKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKA-GTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSK-DQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRK-ILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQ 723
               F +I  SV  +K  A L GG+ G  ++L G+SG V SG  +AI+GPSGAGKT+LL+    +      + +++ G +T++GE ++RS+F ++ A+VPQ D LW A+T  ENL +A +LYG      +     + +++  LGL  C+  K+GN  +KG+SGGQKRR S+G ELV  RK ILFLDEPTSGLDAASAS+IM L+ R+A    +I+  S+HQPS+ VF +FD+
Sbjct:   72 SLEFQDITFSVTNTKLGALLTGGQVGTHQILHGISGRVISGMAMAIMGPSGAGKTTLLETLARQPSVVNNENIALGGSVTIDGEQLTRSYFAKHCAFVPQYDALWPAMTAVENLEYAARLYGDFGGDVENMNAAISDIMEELGLSSCKDVKVGNVFLKGLSGGQKRRLSLGCELVSGRKEILFLDEPTSGLDAASASEIMKLIRRIAKIFNLIVCCSIHQPSSHVFFAFDR 302          
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Match: ABC(ABCG) (family transporter: White protein-like protein (ABCG) (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S576_OSTLU)

HSP 1 Score: 189 bits (481), Expect = 1.850e-56
Identity = 100/206 (48.54%), Postives = 141/206 (68.45%), Query Frame = 1
Query:  121 KKVLRGVSGAVDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSRSFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVVASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSGLDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQASIQS 738
            K++L G+SG V SG++LAI+GPSGAGKT L+D+   + K GT     TGD+ +NG P++   F ++ + VPQ DRLW+ LTV E L FA  L   + S +++++RVD ++ ++GL   +HTK GN  +KG+SGGQKRR S+ I LV    +LFLDEPTSGLDAA+A+ IMA L  LA    + I  ++HQPS+ VF+ FD+  + S
Sbjct:    1 KEILHGISGQVCSGEVLAILGPSGAGKTCLIDLLTLEGKGGTY----TGDVRLNGIPITPELFTKHCSTVPQVDRLWAFLTVEETLTFAADLL-LKSSAEEKKQRVDAIINTVGLASSRHTKCGNQFLKGLSGGQKRRLSLAIALVSSPSVLFLDEPTSGLDAAAAASIMAFLKELAQAANIAICCTIHQPSSAVFHGFDRIMLLS 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8035.1.3 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ABC7.530e-11876.05protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
ATP-binding3.490e-11773.36cassette superfamily n=1 Tax=Ectocarpus siliculosu... [more]
ABC1.750e-11672.73transporter domain-containing protein n=1 Tax=Ecto... [more]
ABC4.930e-11278.26protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
ATP3.980e-10577.88transporter, putative MET type n=1 Tax=Ectocarpus ... [more]
Hypothetical6.380e-6550.62protein n=1 Tax=Amorphochlora amoebiformis TaxID=1... [more]
Hypothetical2.890e-6149.34protein n=1 Tax=Lotharella globosa TaxID=91324 Rep... [more]
Hypothetical1.170e-5745.69protein n=1 Tax=Pyramimonas obovata TaxID=1411642 ... [more]
Hypothetical6.780e-5746.32protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
ABC(ABCG)1.850e-5648.54family transporter: White protein-like protein (AB... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8035contigH-canaliculatus_M_contigs8035:725..4581 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G2U6
PFAMsABC2_membrane,ABC_tran
Model size762
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.87e-117
EggNOG OGsCOG1131@1|root,KOG0061@2759|Eukaryota
Ec32 ortholog descriptionABC transporter-like
Ec32 orthologEc-16_001530.2
DescriptionATPase activity, coupled to transmembrane movement of substances
Cds size762
COG categoryV
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854132.1356313-CDS-H-canaliculatus_M_contigs8035:724..9031696854132.1356313-CDS-H-canaliculatus_M_contigs8035:724..903Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8035 725..903 -
1696854132.1484153-CDS-H-canaliculatus_M_contigs8035:1355..14521696854132.1484153-CDS-H-canaliculatus_M_contigs8035:1355..1452Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8035 1356..1452 -
1696854132.1621535-CDS-H-canaliculatus_M_contigs8035:1656..17781696854132.1621535-CDS-H-canaliculatus_M_contigs8035:1656..1778Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8035 1657..1778 -
1696854132.1733835-CDS-H-canaliculatus_M_contigs8035:3325..34581696854132.1733835-CDS-H-canaliculatus_M_contigs8035:3325..3458Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8035 3326..3458 -
1696854132.1841445-CDS-H-canaliculatus_M_contigs8035:4350..45811696854132.1841445-CDS-H-canaliculatus_M_contigs8035:4350..4581Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8035 4351..4581 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8035.1.3prot_H-canaliculatus_M_contigs8035.1.3Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8035 725..4581 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8035.1.3

>prot_H-canaliculatus_M_contigs8035.1.3 ID=prot_H-canaliculatus_M_contigs8035.1.3|Name=mRNA_H-canaliculatus_M_contigs8035.1.3|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=254bp
LCRPRGSGARVQVDFRFHNICLSVEVSKAKAALMGGKAGAKKVLRGVSGA
VDSGQILAIIGPSGAGKTSLLDVFVGKVKAGTQGLSVTGDITVNGEPMSR
SFFLENAAYVPQEDRLWSALTVRENLMFACKLYGPRMSKDQREKRVDEVV
ASLGLDGCQHTKIGNTLIKGVSGGQKRRTSIGIELVVHRKILFLDEPTSG
LDAASASDIMALLGRLASETGMIIITSVHQPSTRVFNSFDQASIQSVLSS
CLR*
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mRNA from alignment at H-canaliculatus_M_contigs8035:725..4581-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8035.1.3 ID=mRNA_H-canaliculatus_M_contigs8035.1.3|Name=mRNA_H-canaliculatus_M_contigs8035.1.3|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3857bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8035:725..4581- (Hapterophycus canaliculatus Oshoro7m male)
CTTTGTCGACCTCGGGGCTCGGGCGCACGTGTCCAGGTTGATTTTCGCTT TCACAACATATGCTTAAGCGTGGAGGTCTCCAAGGCGAAGGCCGCCCTGA TGGGAGGAAAGGCCGGCGCGAAGAAGGTCCTCAGGGGCGTTAGCGGTGCG GTCGATTCGGGGCAGATCCTGGCGATCATTGGACCTTCCGGGGCGGGAAA GACATCTCTGCTTGACGTCTTTGTCGGGAAGGTGCGCCTTGGACCAAGCC CTGTCGATTTCGCAAAACAATGCTCATTTTATAAAAACGAATCGGCTCAG AGGTTGTGTTTTTTGCCGCAACGACGGGGCTTGGTTTTCATGTGTCGTCC AACGAATCCGTAGGTGCTATCCAAAAATGGAGGCCAATCACAGTGACTGA GCGCAAACACATCATTTCGTCCCCAGTAGTCACGTCTGCTCGGCTCCTTC GTCAGGAATAAAGGTGGGTATCAATTGCTGCGGTGAAGGGTTGGCGCTCG CTTCCACCAAACCCTTTTATCGTTGGATTCAATAGTCTTTGATCTGTAAG GATTTGTGTTCTCTCCTCTACCTCCGTTTCTGCTCTGCGATAGCTGAAAG CGTACAAATGTGCCCATGTTGCGATCGGGCAAGTACCGCACGTTGTAGCC GACATGTATTTTGTTCCCTGATCGCATGCGCCACATTTTGTTCGAACGCG AAGAATCTTTGCTCATGACAAAGAGTAGCGCTTTCGGTCGTGGGGGCAAT ATAACCTAACGCATGCAGCAGAGCTGGAGGTGGCCCTGACACGAGTGCAC ACTTTTTCTAGTGCTCGCTCGCTGGTCGTTAAGAGATTCCCAGCTTCCAC CAGTACTACTGGGTGTTGATTTTGCGGCCCGTTCCTTTGTTTCTGTAAGC TCATCCTGACACGTACATTCATTGTGGGTGTCGTCTCTAAAATAGGCGAC ACGCTTTTTATGTGGCCCTCGAAACGCGCGCCAGAATAGCTATACCAGCT CTGCGGCAGCACCGTTTCGTCTCACAGCTTGCGGACTGCACGGCCACAAA GACAGTCGATGGTAATGACCCGCCCAGGCGAGGGCCGGCCCACAAAAACA GTCGATGACCATGACCTGCCCAGGTGAAGGCCGGCACCCAGGGCCTAAGC GTCACCGGCGACATCACCGTAAACGGCGAGCCCATGTCCCGTTCTTTCTT CCTGGAGAATGCCGCTTACGTGCCTCAGGAGGATCGCTTGTGGAGTGCTC TCACAGGTGTGTGACTATCGTCACCGTCAATTCAACTTGCAGTTGATTCG TTCATCACTGCGCGATGATTCCCCAAGAACATTTCAGTAAGTTTGTGTTG TTATTTCCACAAAAGTAGTAGAACCGTTTCCCTCTTCCGGCGTCATACAT CTAATGACTCTCTCACCAGAGGAGAAAATATGCGAATAAATCTCGATACT TGTAGGCGAACGAAGAAGTAGCTCAACGTTGTGCGTAAGACAATCCTTTG TTCACGTATGGGTTAGTATTTCGAGCTTCTTATTTAAAAGGAATAATATG ACAACACCGGATGTCTTCTAAACCAGGTCTCAGAAGGCATCTCAGGAGCC TTATTCAAAATTCCAAACAGTGAGGTTTCAGTGCTTTGGAAGGCATATAA ACATAACAGAAATAGAATGCCATGAGACCCGGTAGCTGGTGAGATATGCA GGGATTGATTGTGGTGAGATGTACGTGGTTCAAAGAAACATTTGATGCAA CGAATGAGAAGGCGATACATCCAATCCGGGTTCGCATACGTCCTTTGGTG AAGCGTCAAGTGAATGATGTCTCGGACATATGTCAGTAGATGGTAGCCAT GAAGCGAAGGAATCGACCCACAGACGACCTTCTACTCTCATTTTGGACAA GGGAAACATGTGTGTGAGCATCTGATGTACTTACCTCTTCACTGGCGTCT TTGTCGTTCGTGGACTATGTTGCAAGGGCCATATGTGCGTGCATTTATTG ACCTGAGGTTGTTACGTTTTTGTCGTAGCGAATACGTGAATCCAGTTGCC TACACCAACTACTGCTTTCGTTGTTGGTGGAAAATATGTTCTAACTCACT CGCAGTCTGGATCACCTTTCTTTCCGCTTACTACGAAACACGTAATCGAG CAAAACATGTACTTCGAAGTGGTTGAACTAGACCATCCTCCTCATATTAC TCAGAAAGCACGCAAGAAATGGGCGCCTTACATTGTTGGTACGGCTCATC GTGATCCCGCCTCGTGAGACTCTTCGTAAGGCTCGATGAGGCCTCGTGTG CCTCCATGAGACGTCTCCTGAGGCAGGTGGCCCATCAGGGCTCATGAAGC CCCATGAGGCGCGGCTCATGAGACGTCTCACGAGGCCTTATCGGGCCTCA TGAGCCCCCATGATACCCGAGGGACTGCCTTTGTTTGCACCCCAAGAATC CTCTCACCTCCTTCAGTAGTCCAACAATTTTCGGAAGCTATGATATGCCA ATCGAAATACCAGCCTCATGCCACAGACGATGGAACTTCGGTAACATCCC CCCCAAACATGTATGGACCAGCTTTCCGGCTCCTTCTGTGGTCGCGCCAC AACAAGCAGTAATGCTTTTGAAAGCCGGTTGGGTCATGTGGATTGTTCAC TTGAGGTAAGTTTTCCGGTACCCGCGTTTTTATGTTGATGCATATGCACC CTTGAACTTCATCGCATTGCCTCGACCCAAGCAACTGTGATCACATTTGG AAGTGTTATTTATCACCTGCCGCCTGCGAAATGATCGCTTGTTCTTCATG CAGTTCGCGAAAACCTGATGTTCGCATGCAAGCTGTACGGGCCCCGTATG TCCAAGGACCAACGAGAAAAGCGAGTGGACGAGGTCGTGGCAAGCTTGGG CCTGGACGGCTGCCAGCACACCAAGGTTTGGGGAGGAAGATCACGGGTCA CCGATTCGAGCGTAGGGGTCGAAAACGAAGCACCGCAGGTGAGTAGTTGG ATTTTTGCAAGAAACGTAGTTTGCCGTGCCGAAAGAGGCGTTTCTTGATT CCTCCCTTTCCCCGCCTCCTTCTATGCCCGCCTGCTACCGTTCGCGCGGT ATCGACCCCTCGTTTGACAACATGTGCAGATCGGGAACACTTTGATTAAA GGCGTCTCGGGGGGGCAGAAGCGGCGCACTTCGATCGGCATCGAGCTCGT CGTACATCGCAAAATCCTGTTCCTAGGTACTGTGGGGTTGCGAGGAAATG GAAGCAAAAGTGTCGCCAGCGGTTCGCGCTGACCAGCCCAACAATATCCC TGGGAACAAGCAACAACATATTTAGCTACTCTGCAGTTTTCCAATCATTA TCCCGACGTTTCGATCAGCGCACCAGCCATCCCTCTATCGCCCTGTCTTA AGGGAATACGACGTAGGTCGTGTAGGTGCCGAAGAGAGCTGCAAGAGAAA AGGGAGAGGCCTCAGAACAGGGTCGCCGAGGGAATGTAGTTCAGAGGTTG GAAAGGGACCAAAATCATTGATTCAAGGTGACCGATGAAAGCCCTCCCCG TTCATGCCGCGTCATCCTTCCTTTGCGCGGAGCTTTCGTGGTATTTTACT ATGAAATCGCTGACCCCCATGAAAAATTACACCCCATTGTGTGTCCCTTG TTTTTCGTGCTTGTGTGCAAAATCGAAGATGAGCCGACTTCCGGGCTCGA CGCTGCTTCGGCTTCCGACATCATGGCCCTCCTGGGGCGCCTGGCGTCCG AGACCGGTATGATCATCATCACCAGCGTGCACCAGCCTTCTACTCGTGTG TTCAACAGCTTCGACCAGGCAAGCATTCAATCTGTTTTATCGTCGTGCTT GCGGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8035:725..4581-

>mRNA_H-canaliculatus_M_contigs8035.1.3 ID=mRNA_H-canaliculatus_M_contigs8035.1.3|Name=mRNA_H-canaliculatus_M_contigs8035.1.3|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=762bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8035:725..4581- (Hapterophycus canaliculatus Oshoro7m male)
CTTTGTCGACCTCGGGGCTCGGGCGCACGTGTCCAGGTTGATTTTCGCTT
TCACAACATATGCTTAAGCGTGGAGGTCTCCAAGGCGAAGGCCGCCCTGA
TGGGAGGAAAGGCCGGCGCGAAGAAGGTCCTCAGGGGCGTTAGCGGTGCG
GTCGATTCGGGGCAGATCCTGGCGATCATTGGACCTTCCGGGGCGGGAAA
GACATCTCTGCTTGACGTCTTTGTCGGGAAGGTGAAGGCCGGCACCCAGG
GCCTAAGCGTCACCGGCGACATCACCGTAAACGGCGAGCCCATGTCCCGT
TCTTTCTTCCTGGAGAATGCCGCTTACGTGCCTCAGGAGGATCGCTTGTG
GAGTGCTCTCACAGTTCGCGAAAACCTGATGTTCGCATGCAAGCTGTACG
GGCCCCGTATGTCCAAGGACCAACGAGAAAAGCGAGTGGACGAGGTCGTG
GCAAGCTTGGGCCTGGACGGCTGCCAGCACACCAAGATCGGGAACACTTT
GATTAAAGGCGTCTCGGGGGGGCAGAAGCGGCGCACTTCGATCGGCATCG
AGCTCGTCGTACATCGCAAAATCCTGTTCCTAGATGAGCCGACTTCCGGG
CTCGACGCTGCTTCGGCTTCCGACATCATGGCCCTCCTGGGGCGCCTGGC
GTCCGAGACCGGTATGATCATCATCACCAGCGTGCACCAGCCTTCTACTC
GTGTGTTCAACAGCTTCGACCAGGCAAGCATTCAATCTGTTTTATCGTCG
TGCTTGCGGTGA
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