prot_H-canaliculatus_M_contigs8027.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8027.1.1
Unique Nameprot_H-canaliculatus_M_contigs8027.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length396
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs8027.1.1 vs. uniprot
Match: D8LSJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ6_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.250e-54
Identity = 106/116 (91.38%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:  281 AWRMDRKLESDLLKLFGQADQVDAAFKARTGRVLEGMVERRDSPDGDTWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGTSP 396
            AWRM+RKLESDLL+LFGQADQVDAAFK     VLEGMVERRDSPDG+TWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETG  P
Sbjct:  537 AWRMNRKLESDLLQLFGQADQVDAAFK-----VLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKP 647
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8027.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSJ6_ECTSI1.250e-5491.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 4..154
e-value: 1.2E-18
score: 67.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 57..90
e-value: 2.5E-9
score: 34.7
coord: 22..56
e-value: 7.1E-9
score: 33.3
coord: 365..396
e-value: 4.4E-5
score: 21.4
coord: 92..126
e-value: 1.2E-6
score: 26.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 358..396
e-value: 9.9E-5
score: 22.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 90..124
score: 10.687325
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 55..89
score: 12.33152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 125..159
score: 8.604678
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 362..396
score: 11.027125
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 20..54
score: 12.430172
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 265..396
e-value: 2.1E-13
score: 52.4
coord: 1..224
e-value: 3.2E-51
score: 176.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..180
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 2..156
coord: 292..396

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8027contigH-canaliculatus_M_contigs8027:729..4864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8027.1.1mRNA_H-canaliculatus_M_contigs8027.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8027 729..4864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8027.1.1 ID=prot_H-canaliculatus_M_contigs8027.1.1|Name=mRNA_H-canaliculatus_M_contigs8027.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=396bp
QVDEAFSWLEEMRARGLDPNRVTYSALINACGRAGQLSRAFQTLDDMVGT
GIEPNVVTWTTLIDACGKGNELEWSFRLFKEMRERGTVPNGVTCSALMDA
CLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQADRARVLLD
ELNKRRPSSVGTAAGTTTTTTATTTAASNETGVRDDRREENVGRLGGGGR
GGAAASAVVVGAQGKAPRGSETAAEKAQGDASRSAAASASAAVPTASVAH
GDGAGTPAVAAAAAAAAVGDGENGDGAREEAWRMDRKLESDLLKLFGQAD
QVDAAFKARTGRVLEGMVERRDSPDGDTWLLLLNAVDTAGALDKAVELME
RSRAEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGTSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long