prot_H-canaliculatus_M_contigs8016.4.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8016.4.1
Unique Nameprot_H-canaliculatus_M_contigs8016.4.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length312
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs8016.4.1 vs. uniprot
Match: A0A6H5KHP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP2_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.420e-12
Identity = 144/313 (46.01%), Postives = 161/313 (51.44%), Query Frame = 0 
Query:    1 MTRGCGILVVAAFAATATWPSPSPCRSSSIAWGFLTTTLPSTASSPNAANRRTLHSHRTGRGGSWSAAAKAAAAGERRESICDSSGRALHMIAAAEDEGSEVGLGSRRQVLLSSSPCRPFCNSNCRIGRRTLGLAGANYGGGDGXXXXLGRGGLDPESVARAREAAKNDDYDWFMEFIEGGEDAGDDGTGIDPEDSSRGSATGVLNNRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYDADLVDGSATXXXXXXXXXXXXXTGRGFQPPTNG-NRGDERRRGQRPSAAADSAYDYDLDDEYDREPGR 312
            MTRG G+L+ AA A TATWPS +P RS+S AWGFL       A++P +AN                                             +   S     SR ++LL  S             R T         GG  XXXX    GLD ESVARAREAAK DDYDWFMEFI           G+D E+              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXX GRGFQP + G     E RR +RPS A D+AYDYDLD+EYD+EPGR
Sbjct:    1 MTRGRGVLLAAAVATTATWPSSTPGRSTSSAWGFL-------AAAPRSAN-------------------------------------------CLDANKSTSSTSSRARLLLLPS-------------RAT---------GGXXXXXXXXXXGLDAESVARAREAAKKDDYDWFMEFI-----------GVDEEEXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGFQPLSGGVGTTGEMRRERRPSPA-DTAYDYDLDEEYDQEPGR 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8016.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHP2_9PHAE1.420e-1246.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8016contigH-canaliculatus_M_contigs8016:4185..5120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8016.4.1mRNA_H-canaliculatus_M_contigs8016.4.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8016 4185..5120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8016.4.1 ID=prot_H-canaliculatus_M_contigs8016.4.1|Name=mRNA_H-canaliculatus_M_contigs8016.4.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=312bp
MTRGCGILVVAAFAATATWPSPSPCRSSSIAWGFLTTTLPSTASSPNAAN
RRTLHSHRTGRGGSWSAAAKAAAAGERRESICDSSGRALHMIAAAEDEGS
EVGLGSRRQVLLSSSPCRPFCNSNCRIGRRTLGLAGANYGGGDGGDGGLG
RGGLDPESVARAREAAKNDDYDWFMEFIEGGEDAGDDGTGIDPEDSSRGS
ATGVLNNRGGGSSGGVGGRQRSTAQGDRRNDNGRDSSSSSSSGYDADLVD
GSATGGGVAPQRRRPPPTGRGFQPPTNGNRGDERRRGQRPSAAADSAYDY
DLDDEYDREPGR
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