mRNA_H-canaliculatus_M_contigs80.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs80.1.1
Unique NamemRNA_H-canaliculatus_M_contigs80.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs80.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX9_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.470e-22
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = 1 
Query:  100 EGHYVMVGGVKTRHGCGTYTNGSEQYIGEWQHDAMHGRGEMVFCSGASYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEFFNGMYDNGRAKVALR 441
            EG Y+++ GVK R+G GT+TNG ++YIGEWQ D+MHG+GEM+F S ASYR     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+FFNGMYDNGRAKVALR
Sbjct:   18 EGQYIVIDGVKKRNGFGTHTNGKDKYIGEWQLDSMHGQGEMIFSSDASYRGSFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFFNGMYDNGRAKVALR 131
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BLAST of mRNA_H-canaliculatus_M_contigs80.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CH13_PYTIN)

HSP 1 Score: 68.6 bits (166), Expect = 1.350e-11
Identity = 72/126 (57.14%), Postives = 77/126 (61.11%), Query Frame = 1 
Query:   67 GKFVFPNGAVYEGHYVMVGGVKTRHGCGTYTNGSEQYIGEWQHDAMHGRGEMVFCSGASYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GEFFNGMYDNGRAKVALR 441
            G F FP+GA Y G Y  +GG   RHG G   +G EQY G+W +DAM GRG   F SGAS  XXX     XXXXXXXXXXXXXXXXXXXXXXXXX              G FFNG YDNGR    LR
Sbjct:   50 GTFSFPDGATYTGEYRSMGGKLMRHGRGRMVHGPEQYDGDWDNDAMQGRGVYRFASGASXXXXXVANEFXXXXXXXXXXXXXXXXXXXXXXXXXSDGVYADKDGVEWRGRFFNGKYDNGRVFHTLR 175
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BLAST of mRNA_H-canaliculatus_M_contigs80.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPM1_CAFRO)

HSP 1 Score: 66.2 bits (160), Expect = 6.390e-11
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:   67 GKFVFPNGAVYEGHYVMVGGVKTRHGCGTYTNGSEQYIGEWQHDAMHGRGEMVFCSGASY 246
            GKFVF +GAVYEG +        RHG G+Y++G+E Y G W+ D MHGRGE    +GA++
Sbjct:   24 GKFVFGDGAVYEGEFRETSAGVQRHGEGSYSDGAETYTGSWESDEMHGRGEYRSATGATF 83
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BLAST of mRNA_H-canaliculatus_M_contigs80.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SY57_9SPIT)

HSP 1 Score: 66.2 bits (160), Expect = 6.800e-11
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1 
Query:   49 EPETGDGKFVFPNGAVYEGHYVMVGGVKTRHGCGTYTNG---SEQYIGEWQHDAMHGRGEMVFCS 234
            EP+ G G F+ P+G+ Y+G +++V GV+ RHG G Y +G    + Y GEWQ+D MHGRG   + S
Sbjct:   19 EPQEGKGAFLLPDGSKYDGDWIIVDGVRQRHGHGLYIDGIVKGQSYQGEWQNDKMHGRGVFRYAS 83
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BLAST of mRNA_H-canaliculatus_M_contigs80.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A814EBE2_9BILA)

HSP 1 Score: 58.2 bits (139), Expect = 7.660e-8
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 1 
Query:   73 FVFPNGAVYEGHYVMVG-GVKTRHGCGTYTNGSEQYI--GEWQHDAMHGRGEMVFCSGASY 246
            F+F NG  Y+G Y++   G   RHG G +   ++QYI  G W HD MHG G++ F +G SY
Sbjct:   26 FIFANGDRYDGEYIITNEGQVMRHGHGKHIGVNQQYIYEGSWNHDKMHGTGQLTFANGTSY 86
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BLAST of mRNA_H-canaliculatus_M_contigs80.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819KBX6_9BILA)

HSP 1 Score: 55.5 bits (132), Expect = 7.980e-7
Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 1 
Query:   73 FVFPNGAVYEGHYVMV-GGVKTRHGCGTYTNGSEQ--YIGEWQHDAMHGRGEMVFCSGASY 246
            FVF NG  Y+G Y++   G   RHG G Y + ++Q  Y G W HD MHG G++ F +  SY
Sbjct:   26 FVFANGDRYDGEYIITDAGQIMRHGHGKYISANQQCTYEGSWNHDKMHGTGQLTFDNSTSY 86
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs80.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Uncharacterized2.470e-2278.95protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.350e-1157.14protein n=1 Tax=Pythium insidiosum TaxID=114742 Re... [more]
Uncharacterized6.390e-1150.00protein n=1 Tax=Cafeteria roenbergensis TaxID=3365... [more]
Hypothetical6.800e-1146.15protein n=1 Tax=Strombidinopsis acuminata TaxID=14... [more]
Hypothetical7.660e-844.26protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511... [more]
Hypothetical7.980e-744.26protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs80contigH-canaliculatus_M_contigs80:1403..3929 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008862129.1
PFAMsMORN
Model size444
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.21e-14
EggNOG OGsCOG5253@1|root,KOG0229@2759|Eukaryota
Ec32 ortholog descriptionMORN motif
Ec32 orthologEc-27_006760.1
Description1-phosphatidylinositol-4-phosphate 5-kinase activity
Cds size444
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854129.7100232-CDS-H-canaliculatus_M_contigs80:1402..15021696854129.7100232-CDS-H-canaliculatus_M_contigs80:1402..1502Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 1403..1502 +
1696854129.7241182-CDS-H-canaliculatus_M_contigs80:2014..21281696854129.7241182-CDS-H-canaliculatus_M_contigs80:2014..2128Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 2015..2128 +
1696854129.7357829-CDS-H-canaliculatus_M_contigs80:2857..29811696854129.7357829-CDS-H-canaliculatus_M_contigs80:2857..2981Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 2858..2981 +
1696854129.7474842-CDS-H-canaliculatus_M_contigs80:3823..39291696854129.7474842-CDS-H-canaliculatus_M_contigs80:3823..3929Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 3824..3929 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs80.1.1prot_H-canaliculatus_M_contigs80.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs80 1403..3929 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs80.1.1

>prot_H-canaliculatus_M_contigs80.1.1 ID=prot_H-canaliculatus_M_contigs80.1.1|Name=mRNA_H-canaliculatus_M_contigs80.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=148bp
MSDSRDVSDDEGAASPEPETGDGKFVFPNGAVYEGHYVMVGGVKTRHGCG
TYTNGSEQYIGEWQHDAMHGRGEMVFCSGASYRGSFKNNKFHGLGRYEWN
DGATYEGGWRDNKMHGRGCYLDSENSRWEGEFFNGMYDNGRAKVALR*
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mRNA from alignment at H-canaliculatus_M_contigs80:1403..3929+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs80.1.1 ID=mRNA_H-canaliculatus_M_contigs80.1.1|Name=mRNA_H-canaliculatus_M_contigs80.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2527bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs80:1403..3929+ (Hapterophycus canaliculatus Oshoro7m male)
ATGAGCGACTCGAGGGATGTTTCGGACGATGAAGGGGCGGCGTCTCCTGA
GCCGGAGACAGGCGATGGAAAGTTCGTGTTTCCGAACGGCGCCGTCTACG
GTGAGGTGGTGGCCAAGATAGTATCGTAGTTCCTACCTCACTCGTCGTTC
CGGTTCCCCCGAAATCGATCCTGCATGGAAGCAAAGTTAGAGAACTTTTA
CTTTTATGAGTGGCGCCGGCTTTATTCTGCGCCAAGGTTTAGAGCGCTTG
GAGTTATTTACCAGTCAAAGTCAGAGTTAGTTTGCTTGCTCCTTCTCGAT
ACTTCGGATTTTCTTCGAGTGGGAGTCAGTCATGGTTCTACTTTAGTAGG
TGTGTAAAGAGGGACACGGGAGCCTTACCTAGCTAGACGCTCACCACGTT
CGCACCATTACGTTCCCATGCACGAACAGTCTGTCCAAATACACACAAAA
TATGTCTTGTAGACCAATCCTTTTCCAAATTGGAAGCCAGTCGGCTTGAT
ACGGAGGCACAAATATTGTAGAAATTTCTAACTTCCCACGTGTCCGCGCG
GAATTGTGGTCGTTGGGAATTCTTGTGCTCGTTGTGGTTGCCCCGTCTGT
CTGTGTTGAAAGAGGGACACTACGTTATGGTGGGCGGTGTGAAGACGCGT
CATGGCTGCGGGACATACACGAACGGCAGTGAGCAGTACATCGGGGAATG
GCAACACGACGCTATGCACGGGCGAGGTAAGGCGAAATCACGGAGGAATA
CTCGAACACGGAATTTTTAAATAGATTGCAGTACTGCTGTCGGAGCAGAA
CAGCAATACATCGGACCGGGCAGTATTTATTTGCCATCTTTTGCTGCATG
GTTACGGAAGAGAGCCATAATATCCTATCTACAAATGACTGATTGCTTCG
TTGCAGTCAAGGCCCTCTGGAGATAAATGAAGAAATCGATGGGACCCAGA
GTAATATTTGCTTATCCGGGAAATTGCTCGCCGGTATTTTTGTGGTTACA
ACGGCGGCGACAGGGTTGTACTACCTCGTACCTGGCAGCACTACTTTGTG
GAACGAAATGGATACCGCTGCACATCGCTCCTTCTACCATTTCTGCTGCC
GTTCTCATACATAGCGGATCTTCCCCCTCCATTGACACTTGAACTACAGG
AGAATCGAAGTAGACATGCATCCATAACATGCGTGATCGGGTTCGTTCGT
AGCACTGCGTTGGTCGCTGCACGCAGACGGACGGCGATCTCTTTACAGCA
TCACGTGTTCTGTTACAGCTCGCGATCCTCCAGCGATACATACAGCACTC
AGTCGCAAGTAATAACCGCTGATGCTGCTGCCATTGAAAAGTCCACGCCG
ATTCGCCGGACGGCATCAAGTTCATGGCAATCCACTTGGAACAGCAAGCA
TTTCCCCGACTCTCGTAGCTTCCCGGACTTTCAACAAATCATTGGTTGGG
CACAGGCGAGATGGTATTTTGTTCGGGAGCAAGCTACCGGGGCTCCTTCA
AGAACAACAAGTTCCACGGCCTAGGCCGGTACGAATGGAATGATGGCGCC
ACGTACGAGGGCGGATGGAGAGACAACAAGTGAGTGCGGGATCTCTCTGC
TGCTTCGAATTTAGAGTTTACGCCGCAGATTAGTATAGCAACAGTTAGTC
CAGAGCTGCTTCGTGTGGGCATCTCCCAACACCACTTTTACTACGGTGAC
TGCTACACAGTTGTCGAGAAATAAATGCATTGATGTATGCACGCGTCAAT
GTTGAATTAGCAAATTGGTGTTCTGAGGTAGGTGCGGGATGGATACTTGG
CTTTCCTACTTCTCTTCTTACGAGAACGTGAGAGCCCCTCTTGATCGAGT
GAACATGCGATATGCCGCAAAATATACAGAACATTGATAGGTAAATTCTT
GACCATGAAACGCGAGGTACGCAAAAAAAATTGCCCTCAACCCGGGGATG
CAAAAGTGTACACAACACATACATTCTTAATGGTGGAAAGCTGCCGTGCG
GGTACATACAACAGATACGGATTAGATCTATCTGGTACAGCAGCAGCAGT
TGTCTGGCGTAGTACACGCAAGTTTGGAGTTTTCTAACCCGGGATCGTTC
AAGTAGATAAAAACGAGAGAGAAACCGCCGAACATGGCAAGCAACTCATA
AGGAAGTTACTGCTACAGCGTCACACAAGGCATTCCCGATTCCGACCATC
TCTGGCGTGTCGTGGGCACGCGTGACGGACAAATGGCGAGATTGGTCCGA
CCGAGACTCCAAAATAGCTAGAACAGCAGTTCGTTAGTTGCTGTGCACTC
GTTCGATGTCACATATCCGTTGAGCGGCTGACTTTCTCCTCCCGGTGTCG
TCGGAATGACAACAAATAATTAAATAATCAACCACCCTGGCTGCCACTGT
TGTTGCCCTGACTCTGACTAGGATGCACGGGAGGGGCTGCTACTTGGACA
GCGAAAACAGCCGATGGGAAGGAGAATTTTTCAACGGCATGTACGACAAC
GGTCGCGCGAAAGTTGCTCTTCGTTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs80:1403..3929+

>mRNA_H-canaliculatus_M_contigs80.1.1 ID=mRNA_H-canaliculatus_M_contigs80.1.1|Name=mRNA_H-canaliculatus_M_contigs80.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=444bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs80:1403..3929+ (Hapterophycus canaliculatus Oshoro7m male)
ATGAGCGACTCGAGGGATGTTTCGGACGATGAAGGGGCGGCGTCTCCTGA
GCCGGAGACAGGCGATGGAAAGTTCGTGTTTCCGAACGGCGCCGTCTACG
AGGGACACTACGTTATGGTGGGCGGTGTGAAGACGCGTCATGGCTGCGGG
ACATACACGAACGGCAGTGAGCAGTACATCGGGGAATGGCAACACGACGC
TATGCACGGGCGAGGCGAGATGGTATTTTGTTCGGGAGCAAGCTACCGGG
GCTCCTTCAAGAACAACAAGTTCCACGGCCTAGGCCGGTACGAATGGAAT
GATGGCGCCACGTACGAGGGCGGATGGAGAGACAACAAGATGCACGGGAG
GGGCTGCTACTTGGACAGCGAAAACAGCCGATGGGAAGGAGAATTTTTCA
ACGGCATGTACGACAACGGTCGCGCGAAAGTTGCTCTTCGTTGA
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