mRNA_H-canaliculatus_M_contigs7997.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.540e-61 Identity = 127/239 (53.14%), Postives = 153/239 (64.02%), Query Frame = 1
Query: 1 CSRCVRSESECSYSKRRWHHPDHTKDKQQDVPQQR-DRDAKHASEDLDHSTPGALLDGRMLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQG 714
C RCV S +C+Y RRWH K QQ QR DRD H E L + PGAL+ MLPLKR RL ASPATGLVGM+EN FLSDFFGCVGF+PLT S IRETMV++M ++ G C + VG + + AS + LP D S CTFWCA+ALGALAKGSPVESVA Y LA ALT S ST A + A A+L Y+Y F+GD+ +F+EYL LSES L+ ++ +G
Sbjct: 49 CRRCVGSGGQCAYIMRRWHL---LKPHQQQHQSQRPDRDGAHGREVLQSAQPGALVTCGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSE----VGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYLALSESCLKCATAKG 280
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 206 bits (523), Expect = 2.150e-60 Identity = 123/240 (51.25%), Postives = 151/240 (62.92%), Query Frame = 1
Query: 1 CSRCVRSESECSYSKRRWHHPDHTKDKQQDVPQQRDRDAKHASEDL-DHSTPGALLDGRMLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGS 717
C RCVR+ S C+YSKRRWH P + Q P +RDR H E L S P AL+ LPLKR RL ASPA GLVGM+E+ FLSDFFGCVGFLPLT +S IRE MV++M + P G C D+E + +AS P +P CTFWCA+ALGALAKGSP ESVA Y+QLA AL S+SG A + KA A+L YL+ F+GD+++ +EY +SES R S +GS
Sbjct: 43 CGRCVRTGSNCTYSKRRWHLPQPHGQQHQPRPSRRDR--THRKEVLLQSSPPEALVSSARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAVGGGC-DEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALAKSKSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRSSIDRGS 279
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.150e-55 Identity = 104/181 (57.46%), Postives = 122/181 (67.40%), Query Frame = 1
Query: 175 MLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGS 717
MLP KRCRL ASPATGLVGM+EN FLSDFFGCVGFLPLT S IRETMV +M+P + ++ G +C + + G S + P DPS CTFWCAVALGALAKGSP+ESV SYAQLA AL S SG A + KA IL L+ F+G ++F +YL LS+SFLR S QGS
Sbjct: 5 MLPFKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRASSQQSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGHKERFEKYLALSDSFLRSSIEQGS 185
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI) HSP 1 Score: 189 bits (480), Expect = 1.290e-55 Identity = 104/181 (57.46%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 175 MLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGS 717
MLP KRCRL ASPATGLV M+EN FLSDFFGC+GFLPLT S+IRETMVK+MVP + ++ G + + G S LP DPS CTFWCAVALGAL KGSP+ESV SYAQLA AL S SG A + KA IL L+ F+GD ++F +YL LS+SFLR S QGS
Sbjct: 1 MLPFKRCRLSASPATGLVEMQENTFLSDFFGCIGFLPLTTPSQIRETMVKIMVPPASSQQSVFGDGSDKRGHYFEAVAPGGDLSKISAGSQLPMDPSACTFWCAVALGALVKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGDKERFEKYLALSDSFLRSSIEQGS 181
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI) HSP 1 Score: 185 bits (469), Expect = 5.030e-53 Identity = 117/239 (48.95%), Postives = 147/239 (61.51%), Query Frame = 1
Query: 1 CSRCVRSESECSYSKRRWHHPDHTKDKQQDVPQQRDRDAKHASEDLDHSTPGALLDGRMLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGS 717
CSRC+ + +C Y KR+ HP + + +Q R ++E HS GA L LPLKRCRL ASPATGLVGM+EN FLSDFFGCVGFLPLT +S +R MV+MM + A+ + + D +GQ G + G +G + L PS CTFWCAV +GAL KG P ESV Y++LA AL A +G A + KA AIL YLY ++GD KF EYL+LS+SFL S QGS
Sbjct: 37 CSRCIGAGVQCIYIKRKSTHPQYQRKQQL-----RGLAGTQSTELQRHSLSGAFLARDTLPLKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTRSHVRGAMVRMMAHSAAQHQLRARHDTPD-QGQFGAIFSED--GITTG-NQLSTGPSACTFWCAVGVGALVKGRPAESVTIYSRLARGALDA-YTGPVDAEVAKAWAILAYLYGYMGDTAKFEEYLELSDSFLIASIEQGS 265
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 188 bits (478), Expect = 5.120e-52 Identity = 121/244 (49.59%), Postives = 151/244 (61.89%), Query Frame = 1
Query: 1 CSRCVRSESECSYSKRRWHHPDHTKDKQQDVPQQRDRDAKHASEDLDHSTPGALLDGRMLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDP---LPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGSPG 723
CSRC+R+ C+YSKR+ H P + Q+ + R ++ S G LL G MLPLKR +L ASPATGLVGM+EN FLSDFFGCVGF+P T +S IR MV+MM + A+ +P N ++ Q G TF GI P L PS CTFWCAV +GALAKGSPVESVA+Y++LA A+ A +G A++ +A AIL Y Y F+GD F EYL LS+SFL S QGS G
Sbjct: 38 CSRCLRAGVRCTYSKRKPHQPQLGRQHQR---RPRGPAGVQTADMFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQPGARHNS-PEQSQFGD-----TFTE-DGITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDA-YTGPVDADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTG 270
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU29_ECTSI) HSP 1 Score: 172 bits (437), Expect = 4.910e-50 Identity = 107/204 (52.45%), Postives = 127/204 (62.25%), Query Frame = 1
Query: 124 ASEDLDHSTPGALLDGRMLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHA---SGIDP---LPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGS 717
++E L HS+ GALL MLP KR R ASPATGLVGM+EN LSDFFGC+GF+PLT +S IR MV+MM + +P G +G FG GI P L PS CTFWCAV LGAL KGSPVESV +Y++LA AL A +G A + KA AIL YLY F+GD KF EYL+LS+SFL + QGS
Sbjct: 3 STELLRHSSSGALLACGMLPFKRFRWSASPATGLVGMQENACLSDFFGCIGFMPLTTRSHIRGAMVRMMTSSTPHHQP----------GAPHDSPAQGHFGSIFTEDGITPGNQLSTGPSACTFWCAVGLGALVKGSPVESVVNYSRLARDALDA-YTGPVDAEVAKAWAILGYLYGFMGDTGKFEEYLELSDSFLTAAIEQGS 195
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.350e-49 Identity = 103/174 (59.20%), Postives = 118/174 (67.82%), Query Frame = 1
Query: 175 MLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLR 696
MLPLKR RL ASPATGLVGM+EN FLSDFFGCVGF+PLT S IRETMVK+M ++ G F G VG + + AS LP DPS CTFWCA+ALGALAKG PVESVA Y LA ALT S S A + A A+L Y+Y F+GD+ KF+EYL LSESFL+
Sbjct: 1 MLPLKRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSAIG-GAF---GGVGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSESFLK 170
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI) HSP 1 Score: 179 bits (454), Expect = 5.590e-49 Identity = 110/201 (54.73%), Postives = 132/201 (65.67%), Query Frame = 1
Query: 124 ASEDLDHSTPGALLDGRMLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGSPGI 726
++E L HS+ G LLD MLPLKR RL ASPATGLVGM+EN FLSDFFGCVGFLPLT S IR MV+MM + A PD + D +GQ G + G +G + L PS CTFWCAV +GAL KGSPVESVA+Y++LA AL A +G A + KA AI Y Y F+GD F+EYL L++SFL S +GS I
Sbjct: 3 STELLRHSSSGVLLDCGMLPLKRFRLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLD-QGQFGAIFSED--GITTG-NQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDA-YTGPVNAEVAKAWAISGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTDI 198
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 178 bits (451), Expect = 1.530e-48 Identity = 110/201 (54.73%), Postives = 132/201 (65.67%), Query Frame = 1
Query: 124 ASEDLDHSTPGALLDGRMLPLKRCRLRASPATGLVGMRENEFLSDFFGCVGFLPLTDQSEIRETMVKMMVPALARREPDCGTNCFDKEGQVGGLKGRGTFGHASGIDPLPKDPSVCTFWCAVALGALAKGSPVESVASYAQLAIAALTASRSGSTVANLTKASAILTYLYSFLGDMDKFREYLDLSESFLRLSSRQGSPGI 726
++E L HS+ GALL MLPLKR RL ASPATGLVGM+EN FLSDFFGCVGFLPLT S IR MV+MM + A PD + D +GQ G + G +G + L PS CTFWCAV +GAL KGSPVESVA+Y++LA AL A +G A + A AIL Y Y F+GD F+EYL L++SFL S +GS I
Sbjct: 3 STELLRHSSSGALLACGMLPLKRFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLD-QGQFGAIFSED--GITTG-NQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDA-YTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNI 198 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7997.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7997.1.2 >prot_H-canaliculatus_M_contigs7997.1.2 ID=prot_H-canaliculatus_M_contigs7997.1.2|Name=mRNA_H-canaliculatus_M_contigs7997.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=242bp CSRCVRSESECSYSKRRWHHPDHTKDKQQDVPQQRDRDAKHASEDLDHSTback to top mRNA from alignment at H-canaliculatus_M_contigs7997:623..2771- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7997.1.2 ID=mRNA_H-canaliculatus_M_contigs7997.1.2|Name=mRNA_H-canaliculatus_M_contigs7997.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2149bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7997:623..2771- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7997:623..2771- >mRNA_H-canaliculatus_M_contigs7997.1.2 ID=mRNA_H-canaliculatus_M_contigs7997.1.2|Name=mRNA_H-canaliculatus_M_contigs7997.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=726bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7997:623..2771- (Hapterophycus canaliculatus Oshoro7m male)back to top |