mRNA_H-canaliculatus_M_contigs7996.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Ankyrin (repeat protein E2_17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUI1_ECTSI) HSP 1 Score: 182 bits (463), Expect = 1.190e-56 Identity = 87/115 (75.65%), Postives = 102/115 (88.70%), Query Frame = 1
Query: 94 DEFGLSALHYATWNGHVRCVEVLCINDLGRDEAGLQRSCIDLQSCKGFTPLHLAASNGVDGTECIDALLRAGADKSILDMDGKTALDAAIEARREDCVRALRLEMGNVKKGFADY 438
D+FGLSALHYA+WNGHVRCVE+LCINDLG D AGLQRSCIDL+S KG+TPLHLAAS+GV+G +CIDALLRAGAD+SI D+DGKTAL+AAI+A R+DC RAL LE+GN K A +
Sbjct: 2 DDFGLSALHYASWNGHVRCVEILCINDLGHDGAGLQRSCIDLRSIKGWTPLHLAASDGVNGMKCIDALLRAGADRSIRDVDGKTALEAAIDAGRDDCARALNLEIGNAKVRLARF 116
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTH5_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.970e-26 Identity = 72/193 (37.31%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 1 MSGELLRRGAIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCVEVLCINDLGRD-EAGLQRSCIDLQSCKGFTPLHLAA----------------------SNGVDGTECIDALLRAGADKSIL-DMDGKTALDAAIEARREDCVRALRLEMGNVKKGFADYRKDMEAKLKVQRAQRVFDTPGEP 507
MSG+ LR A+ G+ +KNLL G+NPCS DE GL+ALHYA WNGH++CVE+L N G+ E G S I+LQS G+T LH+ A + + EC LL GAD L D++GK+A+D A EA E V ++ ++ + + AK +Q ++V T G+P
Sbjct: 1 MSGDQLRNFAVVGYFLELKNLLAGGANPCSVDEKGLTALHYAVWNGHLQCVEILVANHWGKHHETGDVCSSINLQSKTGYTALHIVAMRMAALLEDESYDANENSDERQTKESENIECCRLLLMVGADCIALRDIEGKSAIDLAREAGNESLVSVFNSVKRPSEQQVQEFTESILAKHMMQHRRKVATTIGDP 193
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Ankyrin (repeat protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I7_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.210e-19 Identity = 47/100 (47.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 97 EFGLSALHYATWNGHVRCVEVLCINDLGRDEAGLQRSCIDLQSCKGFTPLHLAASNGVDGTECIDALLRAGADKSILDMDGKTALDAAIEARREDCVRAL 396
+ GL+ALHYA +NG+ CVEVLC N G D G SCID+ S G T LHLAA+ + I+ LL +GAD +I D G+TA D A E R L
Sbjct: 3 DHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCTALHLAAAEASNAAAIIEILLSSGADAAIRDGQGRTAADVAAEKGRHQYAEVL 102
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1M6_9ARCH) HSP 1 Score: 79.3 bits (194), Expect = 2.650e-16 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 MSGELLRRGAIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCVEVLCINDLGRDEAGLQRSCIDLQSCKGFTPLHLAASN 264
MS +R+ I + ++ L++ +N CS DE+GL+ALHYA WNGHV CV++L N G D G + +C++++SC G T H +N
Sbjct: 1 MSEAKVRQACIHNRIEELEVLVKARANVCSIDEWGLTALHYAVWNGHVECVKLLVFNSHGVDSKGQKTTCLNMKSCIGLTGTHKYYTN 88
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR81_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.530e-13 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 MSGELLRRGAIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCVEVLCINDLG 180
MSG +LR A G + +K LLE G NPCS D+ GL+ALH+A WNGHV VE+L +ND+G
Sbjct: 1 MSGSVLREAAAQGDVEYLKELLETGGNPCSTDDNGLNALHFAVWNGHVEAVELLVVNDVG 60
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDZ5_AURAN) HSP 1 Score: 74.7 bits (182), Expect = 1.530e-12 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1 MSGELLRRGAIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCVEVLCINDLG 180
MSG +LR A G ++ L+ G NPCS DE GL LH+ATWNGHV CVE+L +NDLG
Sbjct: 1 MSGTVLRETAAQGDATYLRELILGGGNPCSSDENGLCPLHFATWNGHVECVELLVVNDLG 60
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Sphaceloma murrayae TaxID=2082308 RepID=A0A2K1QSS1_9PEZI) HSP 1 Score: 67.0 bits (162), Expect = 8.180e-10 Identity = 52/131 (39.69%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 4 SGEL-LRRGAIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCVEVLCINDLGRDEAGLQRSCIDLQSCKGFTPLHLAASNGVDGTECIDALLRAGADKSILDMDGKTALDAAIEARREDCVRA 393
SGE L A +GHL ++ LL+ +NP G +A+H+A H R + L N L R+ ID ++ G T LHLAA G D L+RAGA SI + TAL+AAI+ RRE VRA
Sbjct: 654 SGEYALHVAAQYGHLTIVQQLLDARANPNLAGSDGWTAIHFAVHGKHERVLFTLFNNPL--------RAHIDARNMYGDTGLHLAAEQGE--FHLADILIRAGATPSIRNNGDLTALEAAIDNRRETFVRA 774
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNC7_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.130e-7 Identity = 42/113 (37.17%), Postives = 54/113 (47.79%), Query Frame = 1
Query: 109 SALHYATWNGHVRCVEVLCINDLGRDEAGLQRSCIDLQSCK-GFTPLHLAASNGVDGTECIDALLRAGADKSILDMD----------GKTALDAAI------EARREDCVRAL 396
+ALHYA NGH+ VE+LC+ND GRDE G S + Q+ G++ LH A + G AL+ G + + D G TALD A A E C RAL
Sbjct: 16 TALHYAVLNGHLYSVELLCMNDKGRDEDGNISSALQYQTKDVGWSALHCAVARGKHAVAMTRALIALGVEPGLRDTQQPSLVPKLCQGNTALDLATAQAKQGSAVAELCARAL 128
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Limnohabitans sp. Rim28 TaxID=1100720 RepID=A0A2T7T2N0_9BURK) HSP 1 Score: 58.5 bits (140), Expect = 3.090e-7 Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 28 AIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCVEVLCINDLGRDEAGLQRSCIDLQSCKGFTPLHLAASNGVDGTECIDALLRAGADKSILDMDGKTALDAAIEARR 375
A+ G L +K L+ +N ++ G + LHYA GHV +E L DE+ ID +S G TPL +AA G E + AL++AGAD ++ + G TALD A+ +R
Sbjct: 102 ALKGFLPLVKKLV---NNDADVNKPGWTPLHYAATGGHVPVIEFLL------DESAY----IDAESPNGTTPLMMAAMYG--SPEAVKALIQAGADLTLKNQQGMTALDFAVRGQR 202
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Limnohabitans sp. 2KL-17 TaxID=1100704 RepID=A0A315F4X7_9BURK) HSP 1 Score: 58.9 bits (141), Expect = 3.120e-7 Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 1
Query: 13 LLRRGAIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCVEVLCINDLGRDEAGLQRSCIDLQSCKGFTPLHLAASNGVDGTECIDALLRAGADKSILDMDGKTALDAAIEARRED 381
+L A+ G+L +K L+E ++ ++ G + LHYA GHV +E+L N + ID +S G TPL +AA G E + L++AGAD ++ + G +ALD A+ +R++
Sbjct: 96 VLMLAALKGYLPLVKKLVEHDADV---NKTGWTPLHYAASGGHVAVIELLLENS----------AYIDAESPNGTTPLMMAAMYG--SPEAVKVLIQAGADLTVKNQIGLSALDFAVRGQRQN 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7996.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7996.2.1 >prot_H-canaliculatus_M_contigs7996.2.1 ID=prot_H-canaliculatus_M_contigs7996.2.1|Name=mRNA_H-canaliculatus_M_contigs7996.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=171bp MSGELLRRGAIFGHLGSIKNLLEQGSNPCSKDEFGLSALHYATWNGHVRCback to top mRNA from alignment at H-canaliculatus_M_contigs7996:1659..4910+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7996.2.1 ID=mRNA_H-canaliculatus_M_contigs7996.2.1|Name=mRNA_H-canaliculatus_M_contigs7996.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3252bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7996:1659..4910+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7996:1659..4910+ >mRNA_H-canaliculatus_M_contigs7996.2.1 ID=mRNA_H-canaliculatus_M_contigs7996.2.1|Name=mRNA_H-canaliculatus_M_contigs7996.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=513bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7996:1659..4910+ (Hapterophycus canaliculatus Oshoro7m male)back to top |