mRNA_H-canaliculatus_M_contigs7949.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ2_ECTSI) HSP 1 Score: 234 bits (596), Expect = 4.250e-68 Identity = 117/168 (69.64%), Postives = 135/168 (80.36%), Query Frame = 1
Query: 7 SLRKRVVECLASEGGGATGRRLVGYALGALRNLAARPGTKAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDII-QDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
+L++ V E +ASEGGGA G RL G+ALGALRNLAA+P KAV RVFETPHPY+N MN+ W+V+LP + RIK+VFDPRSRTET+CDWVDII QDPD A R L+ RFHG+ GRENFPGFGGR PLWLEG+RF+ARFQSDPTATDWGVRFTAYG+L CD
Sbjct: 937 TLKQHVGERVASEGGGAFGGRLTGHALGALRNLAAQPRIKAVARVFETPHPYQNNMNVEWDVYLPEAKRIKVVFDPRSRTETSCDWVDIILQDPDGAAVPSILS------RGLHHRFHGQGGRENFPGFGGRLPLWLEGNRFVARFQSDPTATDWGVRFTAYGILDCD 1098
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: HECT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU0_9PHAE) HSP 1 Score: 228 bits (582), Expect = 3.250e-66 Identity = 116/168 (69.05%), Postives = 132/168 (78.57%), Query Frame = 1
Query: 7 SLRKRVVECLASEGGGATGRRLVGYALGALRNLAARPGTKAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDII-QDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
+L++ V E +ASEGGGA G L G+ALGALR LAA+P KAV RVFETPHPY+N MN+ W+V+LP + RIK+VFDPRSRTET+CDWVDII QDPD A R L RFHGR GRENFPGFGGR PLWLEG+RF+ARFQSDPTATDWGVRFTAYG+L CD
Sbjct: 1481 TLKQHVGERIASEGGGAFGACLTGHALGALRTLAAQPRIKAVARVFETPHPYQNNMNVEWDVYLPEAKRIKVVFDPRSRTETSCDWVDIILQDPDGGAVPSNIS------RGLYHRFHGRGGRENFPGFGGRLPLWLEGNRFVARFQSDPTATDWGVRFTAYGILDCD 1642
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: HECT (E3 ubiquitin ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEJ2_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.250e-29 Identity = 68/167 (40.72%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 10 LRKRVVECLASEGGGATGRRLVGYALGALRNLA-ARPGTKAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
LR+R+ E + G +VGYA LR ++P +A+VR E+ HPY + M++ W V LPG+ RIK+VFDPRS+TE CD++ D+ + ++ GR G EN+PG GGRPPL ++ DRF F SD + DWG FTAYG+L D
Sbjct: 2874 LRRRLGELIHGPDGLRLLDGVVGYASHVLRTARDSQPKGRAIVRHLESSHPYSDNMDMYWKVELPGARRIKVVFDPRSKTEAGCDYLCFYSATDRAVTYG------------DTQYTGRGGAENWPGTGGRPPLLIDADRFEVYFHSDGSGNDWGFAFTAYGILADD 3028
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Aste57867_9009 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLY7_9STRA) HSP 1 Score: 116 bits (291), Expect = 4.470e-27 Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 1
Query: 70 LVGYALGALRN-LAARPGTKAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
L+ YA LR + + P ++A+VR E+ HPY + ++ W + +PG+ RIK+VFD RS+TE CDW+ D+ ++ GR G EN+PGFG RPPL +E DRF F +D + DWG FTAYG++ D
Sbjct: 2872 LLAYATATLRRTMQSLPRSRAMVRSLESAHPYNDNVDTYWRIDMPGASRIKVVFDSRSKTEAGCDWMCFYAANDRTITYGET------------QYSGRGGSENWPGFGSRPPLIIESDRFEVYFHTDGSGNDWGWAFTAYGIVSDD 3006
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKN3_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.300e-27 Identity = 55/125 (44.00%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 124 KAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVL 498
+A+VR E+PHPY + M++ W V +PG+ IK+VFD RS++E CDW+ D+ + ++ GR G EN+PGFG RPPL +E DRF F SD + TDWG FTAYGV+
Sbjct: 2946 RAMVRTVESPHPYHDNMDMYWRVDMPGAKHIKVVFDSRSKSEAGCDWLCFYAAGDRSITFG------------DAQYSGRGGTENWPGFGNRPPLVIESDRFEVYFHSDGSGTDWGWAFTAYGVV 3058
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4Z1_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.130e-26 Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 1
Query: 115 PGTKAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
P ++A+VR E+PHPY + + W V +PG+ RIK+VFDP S+TE CDW+ D+ ++ GR G EN+PGFG RPPL ++ D F F +D + TDWG FTA+G++ D
Sbjct: 2867 PKSRAIVRTLESPHPYNDNTDAYWRVDMPGATRIKVVFDPLSKTEAGCDWLCFYSANDRSVTYGEA------------QYSGRGGSENWPGFGNRPPLIIDSDCFEVYFHTDGSGTDWGWAFTAFGIVSDD 2985
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DQ41_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.090e-26 Identity = 55/128 (42.97%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 124 KAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
+A+VR E+PHPY + + W V++PG+ IKIVFD RS+TE CDW+ D+ ++ GR G EN+PGFG RPPL ++ DRF F SD + TDWG FTAYG++ D
Sbjct: 2432 RAMVRTLESPHPYTDNADTYWRVNMPGAKCIKIVFDSRSKTEAGCDWLCFYAATDRHVTYGEA------------QYSGRGGSENWPGFGNRPPLIIDSDRFEVYFHSDGSGTDWGWAFTAYGIVSSD 2547
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CK74_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.750e-26 Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 124 KAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
+A+VR E+PHPY + + W V +PG+ IKIVFD RS+TE CDW+ D+ ++ GR G EN+PGFG RPPL ++ DRF F SD + TDWG FTAYG++ D
Sbjct: 1289 RAMVRTLESPHPYTDNADTYWRVDMPGAKCIKIVFDSRSKTEAGCDWLCFYAATDRHVTYGEA------------QYSGRGGSENWPGFGNRPPLIIDSDRFEVYFHSDGSGTDWGWAFTAYGIVSSD 1404
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZTB4_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.800e-26 Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 124 KAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
+A+VR E+PHPY + + W V +PG+ IKIVFD RS+TE CDW+ D+ ++ GR G EN+PGFG RPPL ++ DRF F SD + TDWG FTAYG++ D
Sbjct: 2034 RAMVRTLESPHPYTDNADTYWRVDMPGAKCIKIVFDSRSKTEAGCDWLCFYAATDRHVTYGEA------------QYSGRGGSENWPGFGNRPPLIIDSDRFEVYFHSDGSGTDWGWAFTAYGIVSSD 2149
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6X948_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.830e-26 Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 124 KAVVRVFETPHPYKNKMNILWNVHLPGSVRIKIVFDPRSRTETNCDWVDIIQDPDKCAAXXXXXXEGGSRRPLNRRFHGREGRENFPGFGGRPPLWLEGDRFLARFQSDPTATDWGVRFTAYGVLGCD 507
+A+VR E+PHPY + + W V +PG+ IKIVFD RS+TE CDW+ D+ ++ GR G EN+PGFG RPPL ++ DRF F SD + TDWG FTAYG++ D
Sbjct: 1303 RAMVRTLESPHPYTDNADTYWRVDMPGAKCIKIVFDSRSKTEAGCDWLCFYAATDRHVTYGEA------------QYSGRGGSENWPGFGNRPPLIIDSDRFEVYFHSDGSGTDWGWAFTAYGIVSSD 1418 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7949.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7949.1.1 >prot_H-canaliculatus_M_contigs7949.1.1 ID=prot_H-canaliculatus_M_contigs7949.1.1|Name=mRNA_H-canaliculatus_M_contigs7949.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=169bp MASLRKRVVECLASEGGGATGRRLVGYALGALRNLAARPGTKAVVRVFETback to top mRNA from alignment at H-canaliculatus_M_contigs7949:3243..4092- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7949.1.1 ID=mRNA_H-canaliculatus_M_contigs7949.1.1|Name=mRNA_H-canaliculatus_M_contigs7949.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=850bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7949:3243..4092- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7949:3243..4092- >mRNA_H-canaliculatus_M_contigs7949.1.1 ID=mRNA_H-canaliculatus_M_contigs7949.1.1|Name=mRNA_H-canaliculatus_M_contigs7949.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=507bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7949:3243..4092- (Hapterophycus canaliculatus Oshoro7m male)back to top |