mRNA_H-canaliculatus_M_contigs7942.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7942.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7942.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U7_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 1.110e-148
Identity = 255/296 (86.15%), Postives = 262/296 (88.51%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAP--------GERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 864
            YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGY+VDPKGDFAVKGSKG   XXXXXXXXXX   G KPGDWECPSCGNNCFASK AC RCG +KP PG A+PK KNGS+      XXXXXXXXXX           ERPT+G+IK RY GFSDHVHQSLLV DES+INYEAISSLLEYIT NFEEGAILVFLPGLAEITKMLEALAGNPLFNDK
Sbjct:  284 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYVVDPKGDFAVKGSKG---XXXXXXXXXXRVSGMKPGDWECPSCGNNCFASKSACYRCGTAKPTPGGAKPKGKNGSRXXXXXXXXXXXXXXXXXXXXXXXXXGAERPTIGEIKNRYAGFSDHVHQSLLVVDESMINYEAISSLLEYITYNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 576          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J2_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 6.090e-144
Identity = 262/300 (87.33%), Postives = 268/300 (89.33%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXX----GAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAP--------GERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 864
            YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGY+VDPKGDFAVKGSKGGXXXXXXXXXXXXXXX    G KPGDWECPSCGNNCFASK AC RCG +KP PG A+PK KNGS       XXXXXXXXXX           ERPT+G+IKKRY GFSD+VHQSLLV DESVINYEAISSLLEYIT NFEEGAILVFLPGLAEITKMLEALAGNPLFNDK
Sbjct:  354 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYVVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXXKGSGMKPGDWECPSCGNNCFASKSACYRCGTAKPTPGSAKPKGKNGSXXXXXXXXXXXXXXXXXXXXXXXXXXGAERPTIGEIKKRYAGFSDNVHQSLLVVDESVINYEAISSLLEYITHNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 653          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z857_9STRA)

HSP 1 Score: 274 bits (701), Expect = 3.400e-80
Identity = 157/290 (54.14%), Postives = 180/290 (62.07%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDKVR 870
            YQIRLESKRS  TRLLLCTTGILLRRLQ+DPWL++VSHVFVDEVHERDLDTDFLLI+L+ LL KRP LK+VLMSATLNA +FSD+F  APV+EIPGR HPVTPF+LEDVLERTGY VDP+G FA K  +GG                 K G  E P                                                       RPT+G+ K    G+S    ++L V DESVI YE I+ LLEYI  NF++GA+LVF+PGLAEITKMLE LA NP+FND  R
Sbjct:  828 YQIRLESKRSNRTRLLLCTTGILLRRLQIDPWLSTVSHVFVDEVHERDLDTDFLLILLRELLYKRPSLKMVLMSATLNAQVFSDYFDNAPVLEIPGRTHPVTPFYLEDVLERTGYTVDPRGLFAYKPPRGGP----------------KGGGGEAP-------------------------------------------------------RPTVGEWKGLLPGYSRGTVENLAVIDESVICYEVIALLLEYICKNFDQGAVLVFMPGLAEITKMLEQLAQNPMFNDSAR 1046          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Helicase (ATP-binding domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPX4_THAOC)

HSP 1 Score: 219 bits (557), Expect = 1.640e-62
Identity = 136/287 (47.39%), Postives = 158/287 (55.05%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFND 861
            Y IRL+SKRS  TRLLLCTTG+LLRRLQ DP LASVSHVFVDEVHERDL+TDFLLIILK LL +RP LKLVLMSATLNA+ FS++FGG P V IPGRA PV  + LED LE TG++V    D A K ++GG                                                                               ER +   +K+ Y G+S +V  SL VADE+VINY  I+ LLEYI TN E+GAILVFL G+ EIT  LEA+     F D
Sbjct:  469 YSIRLDSKRSDKTRLLLCTTGVLLRRLQCDPDLASVSHVFVDEVHERDLNTDFLLIILKDLLERRPSLKLVLMSATLNAERFSEYFGGCPTVSIPGRAQPVKEYRLEDALEVTGHLVREGSDNAKKSARGGQKDE---------------------------------------------------------------------------ERLSKTALKRMYHGYSKNVVDSLAVADEAVINYVLIAELLEYICTNLEDGAILVFLSGMKEITTCLEAINTFEYFED 680          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBY0_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.910e-57
Identity = 128/288 (44.44%), Postives = 155/288 (53.82%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDK 864
            Y IRLE+KRS  TRLLLCTTGILLRRLQ DP LASVSHVFVDEVHERD++TDFLLIILK LL +R GLKL+LMSATLNAD FS +FGG P + IPGR HPV    LED+L  TG+ +    D+A+K    G                                                    P +K+                             +K+ Y      V  SL +ADES++NYE I++LLE+I  N EEGAILVF+PG+ EITK +E L    +F D+
Sbjct:  812 YSIRLENKRSAKTRLLLCTTGILLRRLQCDPDLASVSHVFVDEVHERDINTDFLLIILKDLLRRRKGLKLILMSATLNADTFSTYFGGCPTISIPGRTHPVQENRLEDILALTGHEIKAGSDYALKKRSHG--------------------------------------------------TSPFSKS----------------------------DLKRMYPNHDSKVISSLAIADESIVNYELIAALLEHIVLNGEEGAILVFMPGMMEITKTIEELCKKGVFADE 1021          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZV4_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.740e-54
Identity = 128/285 (44.91%), Postives = 151/285 (52.98%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLF 855
            Y I+LE K S  TRLLLCTTG+LLRRLQ DP LASVSH+FVDEVHERDL+TDFL+IILK LLA+R  LKLVLMSATLNAD FS +FGG PVV I GRA+PV    LED+LE TGY V+  GD+A+K                                                     G  RP   + S +                          +  Y  +S     SL + DE+VINYE I+ LLE+I+ N  EGAILVF PG AEITK +E +     F
Sbjct: 1246 YSIKLEKKMSAKTRLLLCTTGVLLRRLQCDPDLASVSHIFVDEVHERDLNTDFLIIILKDLLARRKNLKLVLMSATLNADSFSSYFGGCPVVSIAGRAYPVQENRLEDILELTGYSVEEGGDYALK----------------------------------------------------TGPNRPVKMSKSALR-------------------------RLYYPKYSKETIHSLSIVDENVINYELIAELLEHISLNQGEGAILVFCPGFAEITKTIEEMYKKEYF 1453          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMV8_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.210e-54
Identity = 122/286 (42.66%), Postives = 156/286 (54.55%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRY-GGFSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLF 855
            Y I+LE K SK TRLLLCTTG+LLRRL  DP LA++SHVFVDEVH+RD+ TDF+LIIL+ LL +R GLK++LMSATLNA  FSD+FGG  VV IPGR HPV  F LED+L+ TG+ +D   +FA K                      K  D                      SK +  EA+ +                         ER +   +K+ Y   ++  V  SL V DES++NYE ++ LLE+I    EEGAILVF+PG+ EITK ++       F
Sbjct:   83 YSIKLEKKMSKHTRLLLCTTGVLLRRLMGDPDLAAISHVFVDEVHQRDVQTDFILIILRELLKRRKGLKVILMSATLNAAAFSDYFGGCAVVSIPGRTHPVQEFRLEDILQETGHEIDEDSEFAAK----------------------KKSD----------------------SKRRENEAKGE-------------------------ERLSKTALKRLYYPKYNSQVIHSLSVVDESLVNYELLARLLEHICMTKEEGAILVFMPGMMEITKAIDEARKKEFF 299          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG42_9STRA)

HSP 1 Score: 196 bits (499), Expect = 7.970e-54
Identity = 118/270 (43.70%), Postives = 158/270 (58.52%), Query Frame = 1
Query:   43 LLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDH-VHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNP 849
            +LLCTTG+LLRRLQ D  L++VSHVFVDEVHERDL+TDFLLIIL+ LL +RP LKLVLMSAT+N+++FS +F GAP+V+IPGRAHPVTPFFLED+L +TGY VDP+G+F+V+ +                                            G +  + G  R     G  I                  +R   G +++ + G  D  V +SL + +E  INYE +++L+ +I  N  EGAIL+F+PGLAEI   + AL G+P
Sbjct:    1 MLLCTTGVLLRRLQCDAHLSTVSHVFVDEVHERDLNTDFLLIILRDLLRRRPTLKLVLMSATMNSEVFSQYFDGAPIVDIPGRAHPVTPFFLEDILAQTGYRVDPRGEFSVEST--------------------------------------------GTNSRRKGRRRDSEAEGPTIHI----------------DRSPEG-LRRDFPGVRDAGVLESLRLVEEDEINYEMVAALVAHINENEAEGAILIFMPGLAEIQNCVMALNGHP 209          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: p-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIR8_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.230e-53
Identity = 127/286 (44.41%), Postives = 151/286 (52.80%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKGGXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGG-FSDHVHQSLLVADESVINYEAISSLLEYITTNFEEGAILVFLPGLAEITKMLEALAGNPLF 855
            Y I+LE K S  TRLLLCTTG+LLRRLQ DP LASVSH+FVDEVHERDL+TDFL+IILK LLA+R  LKLVLMSATLNAD FS +F G PVV IPGRAHPVT   LED+L+ TGY+V+  GD+AVK                                                   K  +  PK    +                           +++ Y   +S    QSL + +E  INYE +S LLE+I+ N  EGAILVF PG  EI K +E L     F
Sbjct:   90 YSIKLEKKMSNKTRLLLCTTGVLLRRLQCDPDLASVSHIFVDEVHERDLNTDFLIIILKDLLARRKDLKLVLMSATLNADSFSGYFSGCPVVSIPGRAHPVTENRLEDILQLTGYVVEEDGDYAVK---------------------------------------------------KKDKRPPKISKSA---------------------------LRRLYHPKYSRETIQSLSIVNECKINYELLSELLEHISFNQGEGAILVFCPGFQEIQKTIEELYKKEYF 297          
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWY0_9STRA)

HSP 1 Score: 186 bits (473), Expect = 7.780e-50
Identity = 133/331 (40.18%), Postives = 176/331 (53.17%), Query Frame = 1
Query:    1 YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLDTDFLLIILKGLLAKRPG---LKLVLMSATLNADMFSDFFGGAPVVEIPGRAHPVTPFFLEDVLERTGYMVDPKGDFAVKGSKG--------GXXXXXXXXXXXXXXXGAKPGDWECPSCGNNCFASKGACNRCGASK-PKPGEAR--PKAKNGSQIAPQPGXXXXXXXXXXAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLLEYIT-----------TNFEEG---------------------AILVFLPGLAEITKMLEALAGNPLF 855
            Y IRLESK +  TRLL CTTGILL+RL+ D  L +V+HVFVDEVHER +++DFLL++L+ L+ KRP    LK+VLMSATL+A +F D+F  AP V+ PGR  PVT  +LED LE TG+ V    D+  KG  G         XXXXXX           KPGDW CPSC  N FA K AC +CG  K  K G+A+  P+A  G+    +                 P   ++ +RY   S  VHQ+L   D + I+Y+ +   + +++            N + G                     A+LVFLPG+ EIT + E L  +P F
Sbjct:  284 YTIRLESKATPNTRLLFCTTGILLKRLEEDETLTNVTHVFVDEVHERSIESDFLLMVLRDLIPKRPDRSPLKVVLMSATLDASLFHDYFWDAPSVKFPGRTFPVTELYLEDALEVTGHSVRGNEDWCRKGGGGFSXXXXXXXXXXXXXKSRPPREDPNKKPGDWTCPSCQANNFARKTACFKCGMPKGAKAGDAKAPPQASRGNAAPTREDPRLVPLPDRDDEYLNPM--ELSERYSKHSPRVHQTLQKLDHNAIDYDLVVQTIAWLSGLPSPRHAAKYLNKKGGGQKVQKQPDDSGLGSQDTTSLAVLVFLPGIKEITTLHEMLLSSPTF 612          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7942.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.110e-14886.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.090e-14487.33protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.400e-8054.14protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Helicase1.640e-6247.39ATP-binding domain-containing protein (Fragment) n... [more]
Hypothetical1.910e-5744.44protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Uncharacterized1.740e-5444.91protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
Hypothetical2.210e-5442.66protein (Fragment) n=1 Tax=Amphiprora paludosa Tax... [more]
Hypothetical7.970e-5443.70protein (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
p-loop1.230e-5344.41containing nucleoside triphosphate hydrolase prote... [more]
Hypothetical7.780e-5040.18protein (Fragment) n=2 Tax=Odontella aurita TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7942contigH-canaliculatus_M_contigs7942:181..4643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G1J2
PFAMsDEAD,HA2,Helicase_C,OB_NTP_bind
Model size873
Max annot lvl2759|Eukaryota
KEGG koko:K13026
Hectar predicted targeting categoryother localisation
Exons6
Evalue9.99e-145
EggNOG OGsCOG1643@1|root,KOG0920@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size873
COG categoryL
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7942.1.1prot_H-canaliculatus_M_contigs7942.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7942 181..4643 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854126.6364255-CDS-H-canaliculatus_M_contigs7942:180..2501696854126.6364255-CDS-H-canaliculatus_M_contigs7942:180..250Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7942 181..250 -
1696854126.6537075-CDS-H-canaliculatus_M_contigs7942:1002..11031696854126.6537075-CDS-H-canaliculatus_M_contigs7942:1002..1103Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7942 1003..1103 -
1696854126.6673596-CDS-H-canaliculatus_M_contigs7942:1409..15991696854126.6673596-CDS-H-canaliculatus_M_contigs7942:1409..1599Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7942 1410..1599 -
1696854126.685564-CDS-H-canaliculatus_M_contigs7942:2811..30611696854126.685564-CDS-H-canaliculatus_M_contigs7942:2811..3061Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7942 2812..3061 -
1696854126.6997201-CDS-H-canaliculatus_M_contigs7942:3585..37181696854126.6997201-CDS-H-canaliculatus_M_contigs7942:3585..3718Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7942 3586..3718 -
1696854126.7106817-CDS-H-canaliculatus_M_contigs7942:4514..46431696854126.7106817-CDS-H-canaliculatus_M_contigs7942:4514..4643Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7942 4515..4643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7942.1.1

>prot_H-canaliculatus_M_contigs7942.1.1 ID=prot_H-canaliculatus_M_contigs7942.1.1|Name=mRNA_H-canaliculatus_M_contigs7942.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=291bp
YQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHERDLD
TDFLLIILKGLLAKRPGLKLVLMSATLNADMFSDFFGGAPVVEIPGRAHP
VTPFFLEDVLERTGYMVDPKGDFAVKGSKGGGGGGGGGGGGGGRGGGAKP
GDWECPSCGNNCFASKGACNRCGASKPKPGEARPKAKNGSQIAPQPGGGG
GGGGGAPAPGERPTLGQIKKRYGGFSDHVHQSLLVADESVINYEAISSLL
EYITTNFEEGAILVFLPGLAEITKMLEALAGNPLFNDKVR*
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mRNA from alignment at H-canaliculatus_M_contigs7942:181..4643-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7942.1.1 ID=mRNA_H-canaliculatus_M_contigs7942.1.1|Name=mRNA_H-canaliculatus_M_contigs7942.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4463bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7942:181..4643- (Hapterophycus canaliculatus Oshoro7m male)
TACCAGATCCGCCTGGAATCGAAGCGGAGCAAGGCGACTCGGCTGCTGCT CTGCACCACGGGAATCCTGCTCCGGCGGCTGCAGGTCGACCCTTGGCTCG CGTCCGTCAGCCACGTCTTCGTCGACGAGGTGAGCCGATCGGGCTTGCGC GCGAAGTCGAGCAGGGGACAGGAGATCCGAGTGGGAGAGGTACACGCTGC CGCGTACGGGTGGGGGTTATGGGCTTGTGGCGTGCTTCCCGGTCTCTGCG TTTGTTGGTTTCAGTCGCTGCCGACAGATGTGCTCGCGTAGAGGACTGTT TTTGTACATCCCCGCAGTAGTTACACTCTCTCTTCGTGCACATTTGTTTT GCACCTGTCTTTCTAAAACGAAGTGTCAAGAACACTGGCCGAAGGAATGC CTGCTGAGTCACGCCTCAGCAGGCGTCTCCTGAGACTTGCGATGAATTCC GTACAGTGATATTCCAGTGCGTTGGGCGGCAGAACAACAACGGAAGTAGA AGGCCGTGAAGCTCTGTAGGGTGAAATAGGCCAGGATTGTGGTGAGATGG ACGCGGTCGAAACAATTCATGCTTTTGTCCCAACCTTACACATAAATGAA CCCTCATTATTTGGAGCTCAATAGAAGCCTCGAGCTACGCCCTGCGCGAC ATACCTCAGGAGGTGCTCCTATGGTGTGTTCCGTTTTTCTCAAGAATGAG AAAGGCGAGGCATTTTCCCGGGCTTTAGTACGTCCTGTGAAGAATCGCCA AGCGTCTTTTTTTTTCATTTTCGTCTGTATTTATGTGCCTCTATCTCCCC AACCGCCCCTCTCTCTTAGCTTTTCTCTCTCTCTGCCTACTCTCCCCTGC TGCTTACCCTTTCCCCCCCCGTCTTCACTGTCCACCTCGACGTCCATCTC GCTCAATTTTTGTGTTCATTTCCAGGTGCACGAGAGAGATCTGGACACCG ATTTCTTGCTCATCATCCTCAAGGGGCTGCTCGCAAAACGCCCAGGACTT AAGCTCGTGCTCATGAGCGCCACCCTGAACGCGGATATGTTCAGCGACTT CTTCGGAGGTAAGAACCCACCCGAACGCCAACCAGGGAGTTCACCCCATG ACATGTTCAGTGATTGTTTCTGGTGTGCGATTCAGATGCCCCCCGCTTTA CGCTTTCGAGGAGCTTTTCCTCTCAATCTTTGTCCACAGGCGGTGTCGGT CGGCGACGTGTCCATGAGCCCTCCCTCAAGTGCGACGTCCATTACAACTC CTTCTCTTAGCAAACCTCATCCGCACGGTCGCGCAGCGACACAAATACCA ATCGAATGTTCGCGATGGACCCGCCGCCGTCACTTATTTCTTGATGGTAT CGGGCACAGCAGTATCGTTTTTCGCCCCACGGAGGCAGGATACGGGATAC ACAATGCAGGGCCGGGAGACGTTCTCCGAAATTCTATACCCTTCCAGGTT CCAAGAAAAGTAGCGGCGTCATAACCGGTCCTGTTGTTTTTCTCCGTAGC TTTGCTCGGGGGGCCTTCCCCTCCGAACGATTCCATTGCTGCGGCAACAT CTCTCCACGCCTACTCCACACACAAACGCCAGGTGCGCCTGTGGTGGAAA TCCCGGGGAGAGCCCACCCTGTGACCCCGTTCTTCCTCGAGGACGTGCTG GAACGCACCGGGTACATGGTCGACCCGAAGGGCGACTTCGCGGTGAAGGG TTCTAAAGGAGGAGGCGGTGGCGGTGGCGGTGGCGGGGGTGGGGGTGGTA GGGGAGGGGGTGCGAAGCCTGGGGATTGGGAGTGTCCCTCGTGCGGGAAC AACTGCTTCGCCAGCAAGGGCGCCTGCAACCGGTGAGGGCAGTTCAGTCT TGCCTCCCCTCCCCCCTCCCCCGACACGCTTTGAGTACTCCCCCTCCTGT CCCCTCCCCCAAAGACCTGGTCAGTCGTCCCTGGTCTGTGAAAACACGGG AGGCGAGCTTCGTCCTTCTCTTTTTTTCGTCTTTTGCGGACTGCGGGGGG GGTCGACGGCCTGAAGCTCTCAAGATCCGTGTTGGTACGTATAGTAGTTG CCCCCTGCCGCAGTTTTACTCTGCTCGAACCGGCGCTTGGTGTACGGCAA CGGCTGTCATTTGTTGACCTTCTTCGAAGTGCTGAGGCACCGTACAAGTA CAAGGCCCCAGAAACACGTGAGTCACCTTGTCAACGCTGCAACAGCGGAA GCAACGCGGCGCTTGGAACAGGTGTGGTGCGCGCAAGCCGGACGGGGCCG GCGGCGGCGGGTTTTCCATGGGAGGAGGCGGTGGGAAAGGCGGGGGGCAA GGCGGCAAGCGGCCCGGCGACTGGGACTGCCCTGGGTGTGGAAACAACTG CTTCGCGAGCAAGTCCGTCTGCAACAGGTGCGTTCAGGCATCCCTTACAA GTGGCACATCTTCCTCTTGTCGTGAATCTGGCGCAGTTTTTTTTTTTTTT TCCGTTCATGGCACGTTGCCACAGGTATGCGTTTGCACCAATGCCCCATC GACCTTGAGCAGAACCTGCGATACAGCGGTGGCGTTTTTGGGTGGACCAG CGAGTGGGAGAGTTTTCAGGTAGGAAGGGCATCAAGCTCCAATAGGTCTG CACCAGGCGTGGAGCGATTAAGATTCTTCTCTTCAGTTTGTTTCATTTCG GTACGTCCGGTTTGGCTGAAAAAAACAATCGCCGCGAGGAGGATGGCGAG TACCACGATGAGAAGATAGGAACATTGGTTCAGGCAATCCCAACCAAAAG AACAGCAAGAACAACACAACCGTGGCAGCCGCCGTGAGCACCACGCTTCT GTTCCCGCTGAACCAACCATCGCACCCGTCTCCGGAAAAACTAAACGGTG TCGGGATCGGTCAGCAATGCGCAGCGGGTCGGTGCACACCGTCACCAACA GGACTATTGTTTCGAAGAAAAACCCTACTCTTTTTGCTGAAGCCGTGCAT CATAATTCCGAGCAATCTTTCGACGCCTCGCGCAGCGCCACTTGTGCAAG CACGCACCGACGCTTCCCGTTGCGGCGTCATCTCGTATTTTCAGATGCGG CGCCTCCAAGCCTAAGCCAGGGGAAGCCAGACCCAAGGCCAAGAACGGTT CCCAGATCGCTCCTCAGCCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGCG CCTGCTCCGGGAGAACGGCCGACCCTGGGGCAGATCAAGAAACGCTACGG CGGCTTCAGCGACCACGTGCACCAGAGCCTTCTGGTGGGTGGGCGGCGGC GAGAGCCACGTGCGCACGCAGCAGCAGTGTCGGGGGGGCGTGCGTATCAC GTGTAGGCCTTGCGCGGTCGGGTCAATCGCACAAGCAGAAGTGTCGGTGC CACCGCCTCCGGCCGCCGCCGCCTTCGCCTTCGCCTTCGCGACCCCTCGT CCTGTCGTAGATTCCCTCTGTTCTTATCTTCCTGGCTGTAAGTGTGCTGC GCACTTAGACCCCATCCGTTTCGCTATCTCTGCTTGTCTCCTTGTTTTTT GCTGTTCTTGGCTGATGCTGATCGATCCCGCGCTGGCAAGGTTGCGGACG AGAGCGTGATCAACTACGAGGCAATCTCGAGCTTGCTGGAGTACATCACC ACCAACTTCGAGGAAGGGGCTATCCTCGTGTTTCTGCCGGGGTAAGCAGA GCACGAATTTTTGTGAGAGGATAGGCGGCACGTGCACCGCGGTGAGGGAG GAGACACAGGGCGGGCCAGGCCCGGACGTGCACTGCGCTGCAGTGACAGA GACGACAAAAAATACGGCATAGATCAGCTCGTGCACTGCATTCCACCGAG GTACACGATGTGGGAAAGGATCGATCAGCATGCGGACTGCAGTGAAGTCA GAGACACGGCGTTGGACAGTCTAGCCCACCACGCGCAGCGCCTTGCAGTG AGAGACGCGACATGAGGCAGGATGCATGAGCACGTTCGCTTCAGCGAAAA CCGAAAACGCGTGTATTGCCGCAGCCTCCGGACTCTCCCTCTCCTCGAAA ATTATGTCTCGTTCGGGAGAGGTGTTTGTTATTGGGGTGTTGCGGTTTTT TCTTCCCGCACCTTGGAGGGGCGTTTCCGTCGACATTTTGCCCGCATGGC GGAAGAGTGGCAGCCCGAATAGCGACAGGAGATCGCACGCACTTTTTCCG AACATGTCGCGTGGGTCTATTCACGACAACTTCCAAGGAACACAGCAGTG TTGTTCTCCAATATTGCGTTGAGCTCTCTCCGTGTTTCGTTCCTTGTCAC CGTTGTTCACTTTTTTCTGTTTCCTTCCTCCACTGTACTACTGCGTTTTG GCCCAACCTTCACCTGCGCCACTGGTTCGGCGCACGTGTGCCTTTGTTGC CATCTTCTTCGCACCTTCCTCCCCCCCCCGAAAAATGGGAAAGGCTGGCT GAGATCACCAAGATGCTCGAGGCACTCGCTGGAAACCCTCTGTTCAACGA TAAGGTGCGTTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7942:181..4643-

>mRNA_H-canaliculatus_M_contigs7942.1.1 ID=mRNA_H-canaliculatus_M_contigs7942.1.1|Name=mRNA_H-canaliculatus_M_contigs7942.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=873bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7942:181..4643- (Hapterophycus canaliculatus Oshoro7m male)
TACCAGATCCGCCTGGAATCGAAGCGGAGCAAGGCGACTCGGCTGCTGCT
CTGCACCACGGGAATCCTGCTCCGGCGGCTGCAGGTCGACCCTTGGCTCG
CGTCCGTCAGCCACGTCTTCGTCGACGAGGTGCACGAGAGAGATCTGGAC
ACCGATTTCTTGCTCATCATCCTCAAGGGGCTGCTCGCAAAACGCCCAGG
ACTTAAGCTCGTGCTCATGAGCGCCACCCTGAACGCGGATATGTTCAGCG
ACTTCTTCGGAGGTGCGCCTGTGGTGGAAATCCCGGGGAGAGCCCACCCT
GTGACCCCGTTCTTCCTCGAGGACGTGCTGGAACGCACCGGGTACATGGT
CGACCCGAAGGGCGACTTCGCGGTGAAGGGTTCTAAAGGAGGAGGCGGTG
GCGGTGGCGGTGGCGGGGGTGGGGGTGGTAGGGGAGGGGGTGCGAAGCCT
GGGGATTGGGAGTGTCCCTCGTGCGGGAACAACTGCTTCGCCAGCAAGGG
CGCCTGCAACCGATGCGGCGCCTCCAAGCCTAAGCCAGGGGAAGCCAGAC
CCAAGGCCAAGAACGGTTCCCAGATCGCTCCTCAGCCGGGAGGAGGAGGA
GGAGGAGGAGGAGGAGCGCCTGCTCCGGGAGAACGGCCGACCCTGGGGCA
GATCAAGAAACGCTACGGCGGCTTCAGCGACCACGTGCACCAGAGCCTTC
TGGTTGCGGACGAGAGCGTGATCAACTACGAGGCAATCTCGAGCTTGCTG
GAGTACATCACCACCAACTTCGAGGAAGGGGCTATCCTCGTGTTTCTGCC
GGGGCTGGCTGAGATCACCAAGATGCTCGAGGCACTCGCTGGAAACCCTC
TGTTCAACGATAAGGTGCGTTGA
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