prot_H-canaliculatus_M_contigs7935.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7935.2.1
Unique Nameprot_H-canaliculatus_M_contigs7935.2.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length723
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7935.2.1 vs. uniprot
Match: D7FGY7_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY7_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 6.120e-75
Identity = 338/732 (46.17%), Postives = 395/732 (53.96%), Query Frame = 0
Query:    1 GDAGGVVEGRAGAASPGR-QRPTFDDLNDPVFRARMKARAKAAK------------KAAAANSGGAE------KLEEKSHQARWMGEPGCGQ--KQSGGGDGERR--LGDGGWMSSRRRDWCLDDVHFPATSKSGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTPPVDAGNEQLGAGATAPGAARAAAAAADPHSGRCTKRGAARGGGIGXXXXXXXXXDGVG--GGDRPRRQDGVGPRSHAKKKIRGGGEGGGKDAPVDLPESGRRSXXXXXXXXXXXXXXXXXXXVEETMAAPANPNKPQRKASASVRFRVTDETSASGEERSAKKCSRRRRCGPQPSTMDKSRVLVRAQQQQRGRCPRGKEMLRQANALQVERIGVADRARSPEAPAEGIRD------------RSPTFSGLGFVLVGLPSKTRREMEDAIVVGAGRVLEDMEPQPRERCARLLPDGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPTASRLPGYVHAIATGAPLLHHLWVSDSAAEARPLPAAPYLLPGAREASKRRQALAGXXXXXXXXXXXXXXXXXXXXXXXX---KVCTRTGTPLMGMAIAVAHPSMATCERWARVLSAAGAETVRRVSGE-LLLPDEGKEEARAAVMSSSPSKNTRSCRKTARAXXXXXXXXRSFFIAKLAGLDCVLCDFPGAWS 691
            GD GG V   A   +  R Q PT D LNDPVFR RMKAR +AAK              A+ N GG+       + +++ HQ  W+ + G G   K+ GGG  E+R  +G  GWMSSRR+DW LDDV  PA    G G+             XXXXXXXXXXXXXXXXXXXXXXXX              PT       E+L    T P     +                       XXXXXXXXX G G  GG RPR   GVGPRSHAKKK RG  EG G+DA          +                    ++T+ +  +P + ++K S SVR R        G    AKKC R++R     + +  S V   A+Q  R   PRG++MLRQA+   V+  G A  A +P    E +RD            R   F GL  VLVGLP    RE++  IV   GRVLED+ P        L    AGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX              VSVP+ASRLP YV AIATG PLLHHLWVSDSAAEARPLPA+PYLLPGAREAS+       XXXXXXXXXXXXXXXXX          K  ++TGTPLMGMAI VAHPS  TCERWA+VL AAGA+TV RV+G+ LL+    +EE      +SSPS+ T SC +  R          S    +LAGLDCVLCDFPGAW+
Sbjct:    7 GDGGGAVVPEARDCTRDRCQEPTADQLNDPVFRGRMKARTRAAKAXXXXXXXSIGGNPASGNGGGSALTGARCQPDKRIHQVGWVDDVGRGLQGKRGGGGGVEQRQAVGFNGWMSSRRQDWGLDDVGLPAAQSRGVGSAAPSASRLSRSKTXXXXXXXXXXXXXXXXXXXXXXXXARAK----------PTA------ERL----TGPSLGGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGCNGGTRPR-SIGVGPRSHAKKKSRGNKEGVGEDA---------GAVAAIPAVPAAAVGSADSTRADKTLTSSPSPRQ-RKKTSGSVRCREVSHEGGRGIP--AKKCCRQQRARSSAAAVAVSPVTSAARQHHRSHGPRGEKMLRQAS---VQAAGTA--AAAPTPTTENVRDSPAAAAAATAAGRIGPFFGLSLVLVGLPDDVHREVDRTIVACGGRVLEDLPPPKTRGGLALRRPAAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVV----------VSVPSASRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASPYLLPGAREASRXXXXXXXXXXXXXXXXXXXXXXXXGHKASHVALAKAVSKTGTPLMGMAIGVAHPSPTTCERWAQVLRAAGAQTVLRVTGDPLLVLLAPREETAVGTRTSSPSRGTWSCSRGRRTAGASSSSSSSLQAEQLAGLDCVLCDFPGAWN 690          
BLAST of mRNA_H-canaliculatus_M_contigs7935.2.1 vs. uniprot
Match: A0A6H5L777_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L777_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 1.720e-63
Identity = 352/753 (46.75%), Postives = 408/753 (54.18%), Query Frame = 0
Query:    1 GDAGGVVEGRAGAASPGR-QRPTFDDLNDPVFRARMKARAKAAK-----------KAAAANSGGAE------KLEEKSHQARWMGEPGCGQ--KQSGGGDGERRL-GDGGWMSSRRRDWCLDDVHFPATSKSGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTPPVDAGNEQLGAGATAPGAARAAAAAADPHSGRCTKRGAARGGGIGXXXXXXXXXDGVGGGD-------------------------RPRRQDGVGPRSHAKKKIRGGGEGGGKDAPVDLPESGRRSXXXXXXXXXXXXXXXXXXXVEETMAAPANPNKPQRKASASVRFRVTDETSASGEERSAKKCSRRRRCGPQPSTMDKSRVLVRAQQQQRGRCPRGKEMLRQANALQVERIGVADRARSPEAPAEGIRD-----------RSPTFSGLGFVLVGLPSKTRREMEDAIVVGAGRVLEDMEPQPRERCARLLPDGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPTASRLPGYVHAIATGAPLLHHLWVSDSAAEARPLPAAPYLLPGAREASKRRQALAGXXXXXXXXXXXXXXXXXXXXXXXX---KVCTRTGTPLMGMAIAVAHPSMATCERWARVLSAAGAETVRRVSGE--LLLPDEGKEEARAAVMSSSPSKNTRSCRKTARAXXXXXXXXRSFFIAKLAGLDCVLCDFPGAWS 691
            GD GG V   A   +  R Q+ T D LNDPVFR RMK R +AA               + N GG+       + + + HQA W+ + G GQ  K+  GG  +R+  G  GWMSSRR+DW LDDV  PA    G  + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                         A+AA A P +   T  G + GG  GXXXXXXXXX                                RPR   GVGPRSHAKKK RG  EG  +DA          +   XXXXXXXXX        ++T+ +  +P  P++K S SVR R        G    AKKC R++R       M  S V   A+Q  R R PRG++MLRQA+   V+  G A  A +P   AE +RD           RS    GL  VLVGLP    R++E  IV G GRVL+                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVP+A RLP YV AIATG PLLHHLWVSDSAAEARPLPA+PYLLPGAREAS+R      XXXXXXXXXX                 K  ++TGTPL+GMAI VAHPS  TCERWA+VL AAGA+TV R++G+  LLLP + K    A   +SSPS+ TRSC +  R          S    +LAGLDCVLCDFPGAW+
Sbjct: 2192 GDGGGAVFPEARDCTRDRCQKATADQLNDPVFRGRMKVRTRAANAXXXXXXSTCGNTVSGNGGGSALTGARCQPDRRIHQAGWVDDVGRGQQGKRGRGGVEQRQAAGFNGWMSSRRQDWGLDDVGLPAAQSRGAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------ASAARAKPTAECFT--GPSLGGKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPRSV-GVGPRSHAKKKSRGNKEGVREDA---------GAVAAXXXXXXXXXGSADRTRADKTLTSSPSPG-PRQKTSGSVRCREVSHEGGRGIP--AKKCCRQQRATXXXXAMAVSPVTSAARQHHRSRGPRGEKMLRQAS---VQAAGTA--AAAPTPTAENVRDSPAAAXXXXAGRSGPLFGLSLVLVGLPDDVHRDVERTIVAGGGRVLDXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPSAFRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASPYLLPGAREASRRXXXXXXXXXXXXXXXXATAKAGGSHKVSRAALAKAVSKTGTPLLGMAIGVAHPSPTTCERWAQVLRAAGAQTVLRITGDPLLLLPPQEKT---ADWTTSSPSRGTRSCSRGRRTAGASSSSSSSLQAGQLAGLDCVLCDFPGAWN 2870          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7935.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGY7_ECTSI6.120e-7546.17BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L777_9PHAE1.720e-6346.75BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 399..532
e-value: 0.0016
score: 27.7
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 397..542
score: 8.276361
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 401..556
e-value: 1.5E-9
score: 40.1
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 397..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 700..723
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 641..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 643..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..487

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7935contigH-canaliculatus_M_contigs7935:2762..5017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7935.2.1mRNA_H-canaliculatus_M_contigs7935.2.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7935 2762..5017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7935.2.1 ID=prot_H-canaliculatus_M_contigs7935.2.1|Name=mRNA_H-canaliculatus_M_contigs7935.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=723bp
GDAGGVVEGRAGAASPGRQRPTFDDLNDPVFRARMKARAKAAKKAAAANS
GGAEKLEEKSHQARWMGEPGCGQKQSGGGDGERRLGDGGWMSSRRRDWCL
DDVHFPATSKSGGGAGGGGGGGGGGCGGNGAKSRSSPASTSSRRRRRRRL
SRSEPAPPSPPPPPALPTPPVDAGNEQLGAGATAPGAARAAAAAADPHSG
RCTKRGAARGGGIGGNGGNGGNGDGVGGGDRPRRQDGVGPRSHAKKKIRG
GGEGGGKDAPVDLPESGRRSAAAATVEAAVTAAAAAAAAVEETMAAPANP
NKPQRKASASVRFRVTDETSASGEERSAKKCSRRRRCGPQPSTMDKSRVL
VRAQQQQRGRCPRGKEMLRQANALQVERIGVADRARSPEAPAEGIRDRSP
TFSGLGFVLVGLPSKTRREMEDAIVVGAGRVLEDMEPQPRERCARLLPDG
AGAAAPPEAAARRRRKRSKRGAVSEEEEEEEEEEEGEEGNQVVVVVVVSV
PTASRLPGYVHAIATGAPLLHHLWVSDSAAEARPLPAAPYLLPGAREASK
RRQALAGAGGGGAEGTRRGRAQGTGCGLALAKVCTRTGTPLMGMAIAVAH
PSMATCERWARVLSAAGAETVRRVSGELLLPDEGKEEARAAVMSSSPSKN
TRSCRKTARASSSSSSSSRSFFIAKLAGLDCVLCDFPGAWSSLCRDDNDE
GEDGGDTGGSGGGGAAGAAGAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom