mRNA_H-canaliculatus_M_contigs7925.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL8_ECTSI) HSP 1 Score: 135 bits (341), Expect = 9.900e-36 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 1
Query: 1 RENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 210
RENKLFVGMLPHDADDMTLT VFS FGEITEIYCMRNPDGTPKGCAFVKFSTR+AA+AAIEALHEKCT++
Sbjct: 70 RENKLFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFSTRSAAIAAIEALHEKCTMD 139
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 5.560e-18 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 1 RENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 210
R+NKLFVGM+P A++ L VFS FGE+ E++ +RN DG+ KGCAFVKF R AV AI+ALHE+ TLE
Sbjct: 113 RDNKLFVGMVPKAANEQELRKVFSSFGELREVHIIRNSDGSNKGCAFVKFMERECAVQAIDALHERYTLE 182
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU89_HETAK) HSP 1 Score: 83.2 bits (204), Expect = 1.150e-17 Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 RENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 210
RENKLFVGM+P A + L VF+ FG + E++ +R PDG KGCAFVKF+ R AA+AAI ALHE+ T+E
Sbjct: 125 RENKLFVGMVPRAAAEGDLRAVFAPFGALREVHVIRQPDGANKGCAFVKFAERRAALAAIAALHERHTME 194
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EUA5_TRICV) HSP 1 Score: 77.0 bits (188), Expect = 1.150e-16 Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 4 ENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 210
ENKLFVGM+P DD + +F GE+ +Y +RNPDGT KGC FVK ++R AA AI L+E TLE
Sbjct: 32 ENKLFVGMIPRTMDDKDVRSMFEPHGEVRSVYMIRNPDGTRKGCCFVKMTSREAADVAIGTLNESVTLE 100
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Trinucleotide (repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 4.430e-16 Identity = 38/70 (54.29%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 1 RENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 210
+ENKLFVGM P A++ + VF+ +G + EI+ +RN DGT KGCAFVK++TR +A+ AIEALHE+ T++
Sbjct: 129 QENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQ 198
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3N7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 8.600e-16 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 RENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 210
RENKLFVGM+P A D ++ VF FG+I EIY +R+ DG+ +GCAF+KF R++A+ AI L++K T+E
Sbjct: 277 RENKLFVGMMPRTATDADVSNVFGRFGDIREIYIIRDQDGSSRGCAFLKFKARSSALTAIRELNDKYTME 346
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.660e-14 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 1 RENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLEVSS 219
+ENKLF+GM +AD+ + VF+ FGEI EIY +RN DG+ KGCAF+K+S R +A++AI L+ K ++ +S
Sbjct: 217 QENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGAS 289
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: RRM (domain-containing protein n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C7EB09_NOTPE) HSP 1 Score: 69.3 bits (168), Expect = 2.180e-13 Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 1 RENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLEVS 216
++ KLFVGML D + +F FG I E +R PDGT KGCAFVKF + A A AAI ALH TL VS
Sbjct: 18 KDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPVS 89
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TPQ6_HEMAN) HSP 1 Score: 68.9 bits (167), Expect = 2.430e-13 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 4 ENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNP-DGTPKGCAFVKFSTRAAAVAAIEALHEKCTL 207
E KLFVGM+ ADD ++ F FG I E+Y M++ PKGCAFVKF+ RA A +AI+ALH K T+
Sbjct: 18 EAKLFVGMISKTADDASIRATFGPFGAIDEVYIMKDKATSQPKGCAFVKFTNRADAQSAIDALHGKVTM 86
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZL1_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.890e-13 Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 4 ENKLFVGMLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 210
E+KLFVGM+ + + + +F +G++ IY +RNPDGT +GCAFV+ + R A+IEAL+E+ T+E
Sbjct: 23 EHKLFVGMISREMTERDVRALFLPYGDVRSIYLIRNPDGTRRGCAFVRMTDREGCEASIEALNERITME 91 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7925.1.1 >prot_H-canaliculatus_M_contigs7925.1.1 ID=prot_H-canaliculatus_M_contigs7925.1.1|Name=mRNA_H-canaliculatus_M_contigs7925.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=70bp MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAback to top mRNA from alignment at H-canaliculatus_M_contigs7925:2410..3220- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7925.1.1 ID=mRNA_H-canaliculatus_M_contigs7925.1.1|Name=mRNA_H-canaliculatus_M_contigs7925.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=811bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7925:2410..3220- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7925:2410..3220- >mRNA_H-canaliculatus_M_contigs7925.1.1 ID=mRNA_H-canaliculatus_M_contigs7925.1.1|Name=mRNA_H-canaliculatus_M_contigs7925.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=210bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7925:2410..3220- (Hapterophycus canaliculatus Oshoro7m male)back to top |