mRNA_H-canaliculatus_M_contigs7921.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7921.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7921.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: RING-type (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 501 bits (1291), Expect = 1.690e-173
Identity = 307/441 (69.61%), Postives = 322/441 (73.02%), Query Frame = 1
Query:    1 GGAPSRLRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERMREGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAA-DREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYSWPLRSRLPRFPPPALAALVRRVLAWARRRRPDLSGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAYARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAAL----GGTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLYQYA 1308
            GG P+ LR+AAQPDVVLSQERDLYYA  LLGEGTSELAE LLG+RRVMILAPELRALASCLYF LTNLAGKQTLGQEYCG+ LV SG    G G  S  LS RPLQAYT +RVAVPY QERMREGWHGLRSLRDPFGSGGAA     XXXXXXXXXA APPVGIA+ S S  TAA DR     XXXXXXXX                                        A +RRVLAWARRRRP +SGVLEWALRLHLAAFY DGRFAN AMRAVGARLAYARPEQEA  TRY VLG+LLL+QAAAEAA+ASAETA RWRATA AALSE F R   E  A+    GG    G   G    P RVPA    R  A+ ALFP SRRRCSLCMS+REN AATPCGHLFCW+CIVGWCQTNPECPLCRQP  PQSIVCLYQYA
Sbjct:    3 GGDPTLLRYAAQPDVVLSQERDLYYANRLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNLAGKQTLGQEYCGIDLVPSGR---GGGRESSPLSRRPLQAYTFLRVAVPYLQERMREGWHGLRSLRDPFGSGGAATSLAAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPR-STEGEAVCGEGGGPSDLGEGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 433          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: Peroxisome (biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.260e-49
Identity = 147/428 (34.35%), Postives = 189/428 (44.16%), Query Frame = 1
Query:   58 ERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQA---YTIIRVAVPYFQERMREGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYS---------WPLRSRLPRFPPPALAALVRRVLAWARRRRPDLSGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAYARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLYQY 1305
            ERD YY   L  +G  ++ E+ +G RR  +LA EL  LA  LY  LT LAG+QT+GQEYC +    +G            L   PL A   Y+++ V  PY   R+  GW  LR +R+PF     A              A+A       P+ + E AA                      PP+  DG   +  S  S                                          + VL W    HLA F+L+GR+AN AMRA   RL Y R  Q+AP+ RY +LG+L+L +   E  + +A      R   G   S+             G+G            QRVP ++     A A      R RC+LCM  RE+ AAT CGHLFCW+CIVGWC+TNPECPLCRQPA PQSIVC+Y Y
Sbjct:    2 ERDTYYVGAL-ADGLKDVLESCMGVRRTSMLAAELNLLAGTLYQGLTVLAGRQTVGQEYCDLMFSRNG------------LCDVPLSARAGYSLVEVCWPYLLSRLDTGWPRLRDIREPFDRHAEAARIRDAMR------AHAAESESQQPTSAAEAAAVTP-----------------VAPPD-NDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRA-QDAPLPRYTILGVLMLARFGFEFGAQAA------RKLHGIIFSDGD-----------GSGGXXXXXKANLASQRVPGLSGSDTEAAA-----RRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: RING-type (domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q7Z6_SAPDV)

HSP 1 Score: 131 bits (329), Expect = 8.830e-31
Identity = 120/439 (27.33%), Postives = 181/439 (41.23%), Query Frame = 1
Query:   28 AAQPDVVLSQERDLYYATTLLGEGTSELAEALL--------GSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERMREGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVH-PSERSRYSWPLRSRLPRFPPPALAALVRRVLAWAR----RRRPDLSGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAYARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLYQY 1305
            A Q  VVL+  +D YYA+ LL +   ++ E L         G+   + + PEL+ L   LY  +T   G QT+G+EYC ++ V         G    +LS     ++  +   +PY Q+R   GW  LR                                G A           RE L+         Q   HA+   P      PS+  ++   L              LV+R    A+    R    ++  ++ A+ +HLA FYL GR+ + A R  G R    R + +AP  ++ +LG L+L++ A  +                                LG +       G E  P+R+       D +   +  T++R+C+LC++ R + A TPCGH+FCW+CIVGWCQ  PECPLCRQ   PQ + C+Y Y
Sbjct:   14 APQSRVVLAATKDEYYASELLTQ-LHDVVEKLKFWGRAGGGGAAAQLSIDPELQLLTKFLYLTMT---GSQTMGEEYCDIYRV--------EGERPRMLSWTSTFSWLQLATVLPYLQQRSSLGWSNLRP-------------------------------GEAQARLQQARRQARERLQ--------MQTNQHAVVSAPTTPRRAPSKVDKFLAYLDD------------LVKRAKEMAQTIEARTGTSVTTWMQAAVAVHLALFYLHGRYFDMAKRVAGIRYILTR-KLDAPHAQFSILGYLILLRLALSSV-------------------------------LGLSACLRTLLGVEVAPRRLDQHRVPSDESRPTV--TAQRKCALCLTERSHPAMTPCGHVFCWECIVGWCQNKPECPLCRQLVQPQDVKCIYSY 355          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: Peroxisome (biogenesis factor 10 n=9 Tax=Solanaceae TaxID=4070 RepID=M0ZWN8_SOLTU)

HSP 1 Score: 132 bits (331), Expect = 9.700e-31
Identity = 131/453 (28.92%), Postives = 192/453 (42.38%), Query Frame = 1
Query:    1 GGAPSRLRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERM--REGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYSWPLRSRLPRFPPPALAALVRRVLAWARRRRPDL----SGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAY-ARPEQEAPVTRYVVLGILLLVQAAAEAA-----------SASAETA--GRWRATAGAALSERFSRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLY 1299
            G +  R   AAQP+++ + E+D  YA+ +  E   +    L G+R  +    E + L   LY++LT  AGKQTLG+EYC +  V      AG    SP  + R L  +   + AVPY  ER+  R   H + +L D                       YA         G D T+++                        P   +H S  S  S    SRL         A +R    +  RR P +      +L+  +R +L  FY +G + + + RA G    +  +P  + P  RY +LG+ LL+Q    AA           S SA+ A  G +R +AG         RG       G  +           ++   VA     + +     S  +C+LC+S+R++  ATPCGH+FCW+CI+ WC   PECPLCR P T  S+VCLY
Sbjct:   25 GSSVKRFPLAAQPEIMRAAEKDDQYASFVY-EACRDAFRHLFGTRVAVTYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQV------AGPYGLSPTPARRAL--FIFYQSAVPYIAERVSSRAASHDI-TLADSMAD-------------------YA--------FGDDPTSSNEAEAS-------------------PTFEIHSSSTSAPSISALSRL--------KAKIRDFWLYTIRRWPSMLPLAREILQLVIRTNLMFFYFEGLYYHISKRAAGIHYVFIGKPMNQRP--RYQILGVFLLIQLCILAAEGLRRSSLSSVSTSAQQAPFGTYRTSAG---------RGLPVLNEEGNLITAET-------EKYGLVAESTSTSESQG--NSPSKCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLY 393          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: peroxisome (biogenesis factor 10 isoform X1 n=7 Tax=Solanoideae TaxID=424551 RepID=A0A1U8E1S1_CAPAN)

HSP 1 Score: 127 bits (320), Expect = 3.100e-29
Identity = 131/456 (28.73%), Postives = 193/456 (42.32%), Query Frame = 1
Query:    4 GAPSRLRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERM--REGWHGLR---SLRD-PFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYSWPLRSRLPRFPPPALAALVRRVLAWARRRRPDL----SGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAY-ARPEQEAPVTRYVVLGILLLVQAAAEAA-----------SASAETA--GRWRATAGAALSERFSRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLY 1299
            G+  +   AAQP+++ + E+D  YA+ +  E   +    L G+R  +    E + L   LY++LT  AGKQTLG+EYC +  V      AG    SP  + R L  +   + AVPY  ER+  R    G+    S+ D PFG                            +P+ S+E                          P P   +     S  S    S         L A +R    +A RR P +      +L+  +R +L  FY +G + + + RA G    +  +P  + P  RY +LG+ LL+Q    AA           SASA+ A  G +R +AG         RG       G  +           ++   VA       +    +S  +C+LC+S+R++  ATPCGH+FCW+CI+ WC   PECPLCR P T  S+VCLY
Sbjct:   22 GSVKKFPLAAQPEIMRAAEKDDQYASFVY-EACRDAFRHLFGTRVAVAYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQV------AGPYGLSPTPARRAL--FIFHQSAVPYIAERVSSRVASRGITLADSMADYPFGD---------------------------VPTSSNEAE------------------------PSPTVEIQSYSTSTSSISALS--------LLKAKMRDFWLYAVRRWPSVLPLVREILQLVIRTNLMFFYFEGLYYHISKRAAGIHYVFIGKPMNQRP--RYQILGVFLLIQLCILAAEGLRRSSLSSVSASAQQAPFGTYRTSAG---------RGLPVLNEEGNLITAES-------EKYGLVAEPTSTLESQG--SSPSKCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLY 389          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: peroxisome (biogenesis factor 10 n=8 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4E0R6_JUGRE)

HSP 1 Score: 127 bits (319), Expect = 5.260e-29
Identity = 122/441 (27.66%), Postives = 185/441 (41.95%), Query Frame = 1
Query:    1 GGAPSRLRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERM--REGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYSWPLRSRLPRFPPPALAALVRRVLAWARRRRPDL----SGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAY-ARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERF-SRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLY 1299
            G  P R   AAQP+++ + E+D  YA+ +  E   +    L G+R  +    E + L   LYF+LT  +G+QTLG+EYC +  V SG       +G P    R    + + + AVPY  ER+  R   HG+                                  +   S SD+   D                 GH       +    + R   S+  R          L   + R+  +A +R P +      VL+  LR +L  FY +G + + + RA G R  +  +P  + P  RY +LGI LL+Q    AA     +     + A +     F + RG+    L     +G     +       +   +  + + +   T   +C+LC+SNR+   AT CGH+FCW+CI+ WC   PECPLCR P T  S+VCLY
Sbjct:   34 GSIPRRFPLAAQPEIMRAAEKDDQYASFVY-EACRDAFRHLFGTRVAVAYQSETKLLGQMLYFILTTGSGQQTLGEEYCDITQV-SGP------YGLPPTPARRA-LFILYQTAVPYIAERISSRAASHGI----------------------------------VLADSQSDDAYNDSA------------PGSGHVQSLAETNLSSSTSRGSISFVRR----------LKENLNRLWLYAVQRWPTVLPVAREVLQLVLRANLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRP--RYQLLGIFLLIQLCIIAAEGLRRS--NLSSIASSVHQTSFGTHRGSTVQGLPVLNEEGNLISAD---NNKGSWVSDSSSTSESQATTGISKCTLCLSNRQYPTATACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLY 402          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFD0_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.300e-28
Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 1
Query:  715 WARRRRPDLSGVLEWALRLHLAAFYLDGRFANPAMRAVGAR--LAYARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLYQY 1305
            W  R   D+   +   L+LH+A F+L G + + + R  G R  L+Y RP       ++ +LG ++L++AA  A+          RA  G  L+         AA+            P PPP+++P+ +P+R            ++C+LC++ R + +ATPCGHLFCWDCIVGWCQ+ PECPLCRQ   PQ I CLY Y
Sbjct:   91 WEDRLGVDVPAAVSGLLQLHVALFFLRGTYLHLSKRMAGIRYILSY-RPSPNTSFAQFSILGYMILIRAALTASFTLPTIV---RAVMGTRLAP------PSAASTHRVPCLAVPITPNPPPRQLPSSSPQRI-----------KKCALCLAERSHPSATPCGHLFCWDCIVGWCQSKPECPLCRQLVLPQDIKCLYNY 268          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: peroxisome (biogenesis factor 10 isoform X1 n=2 Tax=Lamiales TaxID=4143 RepID=A0A6I9TKZ1_SESIN)

HSP 1 Score: 125 bits (315), Expect = 1.660e-28
Identity = 129/455 (28.35%), Postives = 184/455 (40.44%), Query Frame = 1
Query:    4 GAPSRLRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERMREGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYSWPLRSRLPRFPPPALAALVRRVLAWARRRRPDLSGVLEWA-------LRLHLAAFYLDGRFANPAMRAVGARLAY-ARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPE-----RDAANAALF----PTSRR------RCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLY 1299
            G   R   AAQP+++ + E+D  YA+ +  +   +    L G+R  +    E + L   LYFVLT  AGKQTLG+EYC +  V      AG     P  + R L  +   + A PY  ER+                                        GI +     +   D E +                        +  S  +  S    S +P      L A +  V  +A RR P    VL +A       LR +L  FY +G + + + RA G R  +  +P  + P  RY +LG+ LLVQ    AA     +     AT     S + +  GA   + G               + +P +  E      D+  ++      PTS        +C+LC+SNR+N  ATPCGH+FCW+CI+ WC   PECPLCR PAT  S+VCLY
Sbjct:   27 GGVRRFPLAAQPEIMRAAEKDDQYASFVY-DACRDAFRHLFGTRVAVAYQSETKLLGQMLYFVLTTGAGKQTLGEEYCDITQV------AGPYGLPPTPARRSL--FIFYQTAFPYIAERISS---------------------------------RIASQGITMADLLSDDIIDNETISNSQ--------------------IQSSASAEMSSSFNSGVPLSALSRLKARITGVWLYAVRRWPS---VLPFARECFMLVLRANLMFFYFEGLYYHLSKRAAGIRYVFIGKPTNQRP--RYQILGVFLLVQLCIIAAEGLRRSNLSTFAT-----SFQQTSHGAYQTSAG---------------RGLPVLNEEGNLITEDSGKSSWVHESTPTSESQASGVSKCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: RING-type (domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E4H4_9ASTE)

HSP 1 Score: 125 bits (315), Expect = 1.660e-28
Identity = 132/457 (28.88%), Postives = 189/457 (41.36%), Query Frame = 1
Query:    1 GGAPSRLRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERM--REGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYSWPLRSRLPRFPPPALAALVRRVLAWARRRRPDL----SGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAY-ARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAALGGTGVQGRHAGPEPPPQRVPAVAPERDAANAA------LFPTS-----------RRRCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLY 1299
            GG       A QP+++ + E+D  Y T L+ E   +    L G+R  +    E + L   LYF+LT  AGKQTLG+EYC +  V      AG     P  + R L  +   +  VPY  ER   R    G+ +L DPF    +                     G +  SG  E +   E                             S  SR S    SRL         A +RR    A +R P +      +L+  +R +L  FY +G + + + RA G R  +  +   + P  RY +LG+ LL+Q    AA        R R ++ ++LS        +   LG             P   VP +  E +           +F +S           + +C+LC+SNR++  ATPCGH+FCW+CI+ WC   PECPLCR PAT  S+VCLY
Sbjct:   24 GGGVRSFPMAQQPEIMRAAEKDDQY-TLLVYESCRDAFRHLFGTRVAVSYQNETKLLGQMLYFLLTTGAGKQTLGEEYCDITQV------AGPFGVPPTPARRAL--FIFYQTTVPYLAERFSSRLASEGI-TLDDPFDDDYSFG-------------------GASASSGRVEASTTSETT---------------------------SFSSRESLSFFSRL--------KAKLRRCWLHAVQRWPSVFPLAREILQLIIRANLMFFYFEGLYYHSSKRASGIRYVFIGKQANQRP--RYQILGVFLLIQLCVLAAE-------RLRRSSLSSLSASV-----QQTPLGTYQYS--------PGNCVPILDEEGNLITGGSEKGSYVFQSSSTSEKQSQTSGQSKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394          
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Match: Peroxisome (biogenesis factor 10 n=4 Tax=Ipomoea TaxID=4119 RepID=A0A2Z4HN89_IPOPC)

HSP 1 Score: 125 bits (315), Expect = 1.740e-28
Identity = 131/452 (28.98%), Postives = 188/452 (41.59%), Query Frame = 1
Query:    1 GGAPSR-LRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMILAPELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLLSGRPLQAYTIIRVAVPYFQERM--REGWHGLRSLRDPFGSGGAAXXXXXXXXXXXXXXAYAPPVGIALPSGSDETAADREGLEEXXXXXXXXQQRGHAMPPEPADGVHPSERSRYSWPLRS----RLPRFPPPALAALVRRVLAWARRRRPDLSGVLEWALRLHLAAFYLDGRFANPAMRAVGARLAY-ARPEQEAPVTRYVVLGILLLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAALG---GTGVQGRHAGPEPPPQRVPAVAPERDAANAALFPTSRR--------RCSLCMSNRENAAATPCGHLFCWDCIVGWCQTNPECPLCRQPATPQSIVCLY 1299
            GGA  R    A QP+++ + E+D  Y T  + E   +    L G+R  +    E + L   LYF+LT  AGKQTLG+EYC +  V      AG     P  + R L  +   + AVPY  ER+  R    G+ +L DPF                    +Y  P  +A    S   A+    +                         HPS  SR+   +R      + R+P          VL  AR        +L+  +R +L  FY +G + + + RA G R  +  +P  + P  RY +LG  LLVQ    AA                 L  R +     A+A     GT       G     +    +  + +  +    P+S          +C+LC+S+R++  ATPCGH+FCW+CI+ WC   PECPLCR PAT  S+VCLY
Sbjct:   26 GGAGIRSFPLAQQPEIMRAAEKDEQY-TFFIYEACRDAFRHLFGTRVAVAYQNETKLLGQMLYFLLTTGAGKQTLGEEYCDITQV------AGPYGLPPTPARRAL--FIFYQTAVPYLAERVSSRIASQGI-TLDDPFDD------------------SY--PFSVASELSSRVEASTTTEIASSS-----------------TSRAHPSVLSRFKTKIRECWLYAVQRWPS---------VLPLARE-------ILQLVIRANLMFFYFEGLYYHLSKRASGIRYVFIGKPTNQRP--RYQILGFFLLVQLCILAAEG---------------LRRRSNLSSISASAQQTPFGTYQTSSGRGVPVLNEEGNLITADSEKGSFVSEPSSTSESQASGLSKCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7921.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RING-type1.690e-17369.61domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Peroxisome1.260e-4934.35biogenesis factor 10 n=1 Tax=Tribonema minus TaxID... [more]
RING-type8.830e-3127.33domain-containing protein n=2 Tax=Saprolegnia TaxI... [more]
Peroxisome9.700e-3128.92biogenesis factor 10 n=9 Tax=Solanaceae TaxID=4070... [more]
peroxisome3.100e-2928.73biogenesis factor 10 isoform X1 n=7 Tax=Solanoidea... [more]
peroxisome5.260e-2927.66biogenesis factor 10 n=8 Tax=Juglandaceae TaxID=16... [more]
RING-type1.300e-2836.68domain-containing protein n=1 Tax=Aphanomyces asta... [more]
peroxisome1.660e-2828.35biogenesis factor 10 isoform X1 n=2 Tax=Lamiales T... [more]
RING-type1.660e-2828.88domain-containing protein n=3 Tax=Cuscuta sect. Cl... [more]
Peroxisome1.740e-2828.98biogenesis factor 10 n=4 Tax=Ipomoea TaxID=4119 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7921contigH-canaliculatus_M_contigs7921:1697..4341 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LAW2
Preferred namePEX10
PFAMsPex2_Pex12,zf-C3HC4_2,zf-C3HC4_3,zf-RING_2
Model size1311
Max annot lvl2759|Eukaryota
KEGG koko:K13346
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0000209,GO:0000280,GO:0000910,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005829,GO:0006082,GO:0006464,GO:0006513,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007049,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007285,GO:0007286,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009062,GO:0009790,GO:0009791,GO:0009793,GO:0009853,GO:0009987,GO:0010154,GO:0010381,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016049,GO:0016054,GO:0016558,GO:0016567,GO:0016740,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019787,GO:0019953,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033036,GO:0033206,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0040007,GO:0042579,GO:0042760,GO:0042886,GO:0043094,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0048137,GO:0048232,GO:0048285,GO:0048316,GO:0048468,GO:0048515,GO:0048588,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0055114,GO:0061458,GO:0061640,GO:0065002,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:0140013,GO:0140056,GO:0140096,GO:1901564,GO:1901575,GO:1903046,GO:1990351,GO:1990415,GO:1990429
Exons4
Evalue2e-176
EggNOG OGsCOG5574@1|root,KOG0317@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-27_006210.1
Descriptionperoxisome-chloroplast membrane tethering
Cds size1311
COG categoryO
BRITEko00000,ko00001,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854125.5659773-CDS-H-canaliculatus_M_contigs7921:1696..19041696854125.5659773-CDS-H-canaliculatus_M_contigs7921:1696..1904Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7921 1697..1904 +
1696854125.580726-CDS-H-canaliculatus_M_contigs7921:2555..27041696854125.580726-CDS-H-canaliculatus_M_contigs7921:2555..2704Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7921 2556..2704 +
1696854125.592629-CDS-H-canaliculatus_M_contigs7921:3053..37581696854125.592629-CDS-H-canaliculatus_M_contigs7921:3053..3758Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7921 3054..3758 +
1696854125.6043205-CDS-H-canaliculatus_M_contigs7921:4092..43411696854125.6043205-CDS-H-canaliculatus_M_contigs7921:4092..4341Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7921 4093..4341 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7921.1.1prot_H-canaliculatus_M_contigs7921.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7921 1697..4341 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7921.1.1

>prot_H-canaliculatus_M_contigs7921.1.1 ID=prot_H-canaliculatus_M_contigs7921.1.1|Name=mRNA_H-canaliculatus_M_contigs7921.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=437bp
GGAPSRLRFAAQPDVVLSQERDLYYATTLLGEGTSELAEALLGSRRVMIL
APELRALASCLYFVLTNLAGKQTLGQEYCGVHLVGSGAMAAGSGHGSPLL
SGRPLQAYTIIRVAVPYFQERMREGWHGLRSLRDPFGSGGAAAALAAARA
RARARAAYAPPVGIALPSGSDETAADREGLEEEEEEEEHRQQRGHAMPPE
PADGVHPSERSRYSWPLRSRLPRFPPPALAALVRRVLAWARRRRPDLSGV
LEWALRLHLAAFYLDGRFANPAMRAVGARLAYARPEQEAPVTRYVVLGIL
LLVQAAAEAASASAETAGRWRATAGAALSERFSRRGAEAAALGGTGVQGR
HAGPEPPPQRVPAVAPERDAANAALFPTSRRRCSLCMSNRENAAATPCGH
LFCWDCIVGWCQTNPECPLCRQPATPQSIVCLYQYA*
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mRNA from alignment at H-canaliculatus_M_contigs7921:1697..4341+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7921.1.1 ID=mRNA_H-canaliculatus_M_contigs7921.1.1|Name=mRNA_H-canaliculatus_M_contigs7921.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2645bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7921:1697..4341+ (Hapterophycus canaliculatus Oshoro7m male)
GGCGGTGCCCCTTCTCGACTGCGGTTTGCTGCTCAACCCGATGTAGTGCT GTCCCAGGAGAGAGATCTGTACTACGCCACGACTTTGCTGGGGGAGGGTA CTTCCGAGCTGGCGGAGGCGCTCCTAGGATCCCGCCGGGTGATGATACTC GCCCCGGAGCTGCGGGCCCTTGCTTCTTGTCTGTACTTCGTCCTCACCAA CCTCGCGGGTAAGGATTTGTTGTAGGATGTGTTCCCGGGGTTGCACAGAT GGCCGGAAGCTCGCAACCTCCTCTCTTACTAGTCAAGGAGATGTACTTCG CATAAGAAAGGGAATGGCTGCAGCAAACAGTCCAGTCAATGGAGGATGTG CTGGACGCGGAGATGACATGTTCATGCTCGTGTAACTTTCGAAAACTCAC GAGCTCATCGTCAGCCCCGCGTTGGTTGCGCCTTAACCCTACACATACTC TACATGACCACGATTGTAAGTAAAGAGACGAACATGCTCCGCTACTTATG CTGTACCCGCTGACGCACACAATCCGCCCGAAAACATGTAAGAAGCGCAA CGTTTACGAACCATCTTCCTCGCAATAAGCGCGAGCAAGTCCATCTTGCT GGTTGTTGTGTCAGACGACCTTCTGGGCAGAAATGAGTACCAGTAGACCT GCTGTAGACCGTGGCAACACCTCGCTGATAGAATCGTGGTCACGGAGTAC GTACCAAAAACGAAGAGAAGAGAGCGGGCAAGTGTCGACAGACCTTGGGT GGGCGAGGCCCTTAGCCAGGCGCCTTGTTTTCCGCAAGCGCGAGCGCCCA GCCCCAAATCAAACGGCATGGTCTTGTCTCGCAATATCGGAATATCCCCA CGCACGCAGGCAAACAAACGCTTGGGCAGGAGTACTGCGGCGTCCATCTG GTGGGCTCTGGGGCCATGGCCGCGGGCAGCGGCCATGGATCGCCCCTCTT ATCCGGAAGACCGCTCCAGGCCTACACAATTATTCGTGTGGCCGTGCCGT ATTTCCAGGTGAATCCAGCCGGGGTGGGCGATGCCATGAGTAGCGAGGTG TGCGTCAGCTATCCTTGGAGTACAGCCTATCAAAACACAACCTACCCATT CTGTGGAACTTTTTCAAGTTTCCCAACAGGGGCGTGGCCAGCTTCAGCTG CGGTACGGTCTCGCGCTATGGGCCCGTACACCCCGGATGTGCCGCCACCC GGCAAAGCCCATTGCATCTGGCCACGCTCTCTCTTGCCTTATCTCCATCG CCCGCCACTGTTTTTGCGTACCGTACCGGCAATTTAAAAAGACACGTCAG CCCTCCTTGCCCACCTCCTCTCAACTGCCGTGCGATGTGCACGATCGGCC GTCCCAGGAACGGATGCGGGAAGGATGGCACGGGCTGCGATCCCTGAGAG ATCCCTTCGGTAGCGGCGGCGCCGCAGCTGCCCTTGCCGCCGCCAGGGCC AGAGCGCGCGCTCGCGCGGCTTATGCGCCACCGGTTGGGATCGCCCTCCC CTCGGGCTCCGATGAGACAGCAGCGGACCGGGAGGGGTTAGAGGAGGAGG AGGAGGAGGAGGAGCATCGACAGCAGCGGGGACACGCGATGCCGCCGGAA CCAGCGGACGGCGTCCATCCCAGCGAGAGAAGCCGGTATTCCTGGCCGCT CAGATCGCGCCTTCCTCGCTTTCCGCCGCCGGCCTTGGCAGCGCTGGTGC GACGGGTCCTGGCGTGGGCACGGCGAAGACGTCCGGATCTGTCGGGGGTT CTGGAGTGGGCCCTGCGGCTGCACCTCGCCGCGTTTTACTTGGACGGGAG GTTCGCGAACCCGGCGATGAGGGCCGTCGGGGCGAGGCTCGCGTACGCCA GACCCGAGCAGGAGGCGCCGGTCACGCGCTACGTGGTGCTGGGGATCCTC CTCCTCGTGCAGGCGGCGGCGGAGGCTGCCTCGGCTAGCGCCGAGACGGC GGGAAGATGGAGAGCCACCGCGGGAGCGGCGTTGTCGGAGCGGTTTTCCA GGCGCGGGGCGGAGGCCGCAGCGCTTGGCGGGACGGGAGTGCAAGGGAGG CATGCTGGTCCGGTGGAAGGAGAAAGCAACACGGTAAGGAGGGGGACGAT TTGCGACTGGTGTTGTGTCTAAGAAGGCGTGCGGTGCCGCCGCTGTGGAG CGATGTGGTCTACCGGGAGGTTGGTAGCTGCGGTGGGCCTTGATCATCCT AGCTTTTTTTCCTCGTCGTGGGAAGATAAAGCGCTTTTTTTCTTTTCGCC CGCAGACGTGGTCGGCTTGGAGCTCTCTTGTACACTGGTGCCAAAGCACA GGCAAAGACAAGAAACCGTCGGGTCATGCCTGCGAAGGTCATTCGAGCGT TCTCTCAACGTCCCTCCTCCCGCTCAAACGCCCGACCCGCTCGCAGGAAC CACCACCACAACGAGTGCCGGCCGTTGCGCCGGAAAGAGATGCCGCGAAC GCGGCCCTCTTTCCAACGTCGCGGCGACGTTGCTCGCTATGCATGTCGAA TAGGGAGAACGCGGCAGCTACCCCATGCGGACACCTGTTTTGCTGGGATT GCATAGTGGGTTGGTGCCAGACGAACCCGGAGTGCCCGCTCTGCCGGCAG CCCGCCACACCGCAGTCGATCGTGTGCTTGTACCAGTACGCATGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7921:1697..4341+

>mRNA_H-canaliculatus_M_contigs7921.1.1 ID=mRNA_H-canaliculatus_M_contigs7921.1.1|Name=mRNA_H-canaliculatus_M_contigs7921.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1311bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7921:1697..4341+ (Hapterophycus canaliculatus Oshoro7m male)
GGCGGTGCCCCTTCTCGACTGCGGTTTGCTGCTCAACCCGATGTAGTGCT
GTCCCAGGAGAGAGATCTGTACTACGCCACGACTTTGCTGGGGGAGGGTA
CTTCCGAGCTGGCGGAGGCGCTCCTAGGATCCCGCCGGGTGATGATACTC
GCCCCGGAGCTGCGGGCCCTTGCTTCTTGTCTGTACTTCGTCCTCACCAA
CCTCGCGGGCAAACAAACGCTTGGGCAGGAGTACTGCGGCGTCCATCTGG
TGGGCTCTGGGGCCATGGCCGCGGGCAGCGGCCATGGATCGCCCCTCTTA
TCCGGAAGACCGCTCCAGGCCTACACAATTATTCGTGTGGCCGTGCCGTA
TTTCCAGGAACGGATGCGGGAAGGATGGCACGGGCTGCGATCCCTGAGAG
ATCCCTTCGGTAGCGGCGGCGCCGCAGCTGCCCTTGCCGCCGCCAGGGCC
AGAGCGCGCGCTCGCGCGGCTTATGCGCCACCGGTTGGGATCGCCCTCCC
CTCGGGCTCCGATGAGACAGCAGCGGACCGGGAGGGGTTAGAGGAGGAGG
AGGAGGAGGAGGAGCATCGACAGCAGCGGGGACACGCGATGCCGCCGGAA
CCAGCGGACGGCGTCCATCCCAGCGAGAGAAGCCGGTATTCCTGGCCGCT
CAGATCGCGCCTTCCTCGCTTTCCGCCGCCGGCCTTGGCAGCGCTGGTGC
GACGGGTCCTGGCGTGGGCACGGCGAAGACGTCCGGATCTGTCGGGGGTT
CTGGAGTGGGCCCTGCGGCTGCACCTCGCCGCGTTTTACTTGGACGGGAG
GTTCGCGAACCCGGCGATGAGGGCCGTCGGGGCGAGGCTCGCGTACGCCA
GACCCGAGCAGGAGGCGCCGGTCACGCGCTACGTGGTGCTGGGGATCCTC
CTCCTCGTGCAGGCGGCGGCGGAGGCTGCCTCGGCTAGCGCCGAGACGGC
GGGAAGATGGAGAGCCACCGCGGGAGCGGCGTTGTCGGAGCGGTTTTCCA
GGCGCGGGGCGGAGGCCGCAGCGCTTGGCGGGACGGGAGTGCAAGGGAGG
CATGCTGGTCCGGAACCACCACCACAACGAGTGCCGGCCGTTGCGCCGGA
AAGAGATGCCGCGAACGCGGCCCTCTTTCCAACGTCGCGGCGACGTTGCT
CGCTATGCATGTCGAATAGGGAGAACGCGGCAGCTACCCCATGCGGACAC
CTGTTTTGCTGGGATTGCATAGTGGGTTGGTGCCAGACGAACCCGGAGTG
CCCGCTCTGCCGGCAGCCCGCCACACCGCAGTCGATCGTGTGCTTGTACC
AGTACGCATGA
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