mRNA_H-canaliculatus_M_contigs78258.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs78258.1.1
Unique NamemRNA_H-canaliculatus_M_contigs78258.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 6.080e-47
Identity = 93/109 (85.32%), Postives = 97/109 (88.99%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRRPMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            LAKTMIQGLKTVIWCCSNYRQPK GQD S XXXXXXXXXX     +Q  ++RRPM+ EERNHTAKFFKWALPCLRVFTKSGGAVSP ESKDALDAFAGAFTVLGPYDLR
Sbjct:  579 LAKTMIQGLKTVIWCCSNYRQPKAGQDNSXXXXXXXXXXXXXXXXNQGTIIRRPMSWEERNHTAKFFKWALPCLRVFTKSGGAVSPTESKDALDAFAGAFTVLGPYDLR 687
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR9_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 9.520e-46
Identity = 93/109 (85.32%), Postives = 97/109 (88.99%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRRPMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            LAKTMIQGLKTVIWCCSNYRQPK GQD S XXXXXXXXXX     +Q  ++RRPM+ EERNHTAKFFKWALPCLRVFTKSGGAVSP ESKDALDAFAGAFTVLGPYDLR
Sbjct:  648 LAKTMIQGLKTVIWCCSNYRQPKSGQDNSXXXXXXXXXXX--XXXNQGTIIRRPMSWEERNHTAKFFKWALPCLRVFTKSGGAVSPTESKDALDAFAGAFTVLGPYDLR 754
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4R5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.210e-10
Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRRPMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            L +TMI G++ VIWC +NYR P   +D ++               +Q+     P+T +ER   AK  +  L C  ++T S  ++  AE K  LD FAGAFTVL   D R
Sbjct:  604 LLRTMILGIRAVIWCTANYRNPHA-KDLTTMDVANPITAASAPETTQSETHLYPLTDDERALIAKVLQNGLRCFILYTLSDSSI--AEEKQMLDHFAGAFTVLDASDFR 709
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4V8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.250e-10
Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRRPMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            L +TMI G++ VIWC +NYR P   +D ++               +Q+     P+T +ER   AK  +  L C  ++T S  ++  AE K  LD FAGAFTVL   D R
Sbjct:  604 LLRTMILGIRAVIWCTANYRNPHA-KDLTTMDVANPITAASAPETTQSETHLYPLTDDERALIAKVLQNGLRCFILYTLSDSSI--AEEKQMLDHFAGAFTVLDASDFR 709
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PY38_SAPDV)

HSP 1 Score: 65.9 bits (159), Expect = 3.070e-10
Identity = 44/109 (40.37%), Postives = 57/109 (52.29%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRRPMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            L +TMI G++ VIWC +NYR P   +D +S            A+   A  V  P+T +ER   AK  +  L C  ++T S  +VS  E K  LD FAGAFTVL   D R
Sbjct:  558 LLRTMILGIRAVIWCTANYRNPHA-KDLTSMDTAAGSVASSSASEVDATHVY-PLTDDERALIAKVLQNGLRCFILYTLSESSVS--EEKQMLDHFAGAFTVLDASDFR 662
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Phosphatidylinositol (kinase (PIK-L3) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEG8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.070e-10
Identity = 41/109 (37.61%), Postives = 52/109 (47.71%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRRPMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            L +TMI G++ VIWC +NYR P     A              +    A     P+T +ER   AK  +  L C  ++T S  +VS  E K  LD FAGAFTVL   D R
Sbjct:  568 LLRTMILGIRAVIWCTANYRNPH----AKDLTTMDTSGSVSSSASEPAEAHAYPLTDDERGLIAKVLQNGLRCFILYTLSDSSVS--EEKQMLDHFAGAFTVLDAADFR 670
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D1L0_SAPPC)

HSP 1 Score: 64.7 bits (156), Expect = 7.800e-10
Identity = 44/111 (39.64%), Postives = 58/111 (52.25%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRR--PMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            L +TMI G++ VIWC +NYR P   +D +S            A+ S+A       P+T +ER   AK  +  L C  ++T S  +VS  E K  LD FAGAFTVL   D R
Sbjct:  555 LLRTMILGIRAVIWCTANYRNPHA-KDLTSMDTAAASV----ASASEAVDATHVYPLTDDERGLIAKVLQNGLRCFLLYTLSESSVS--EEKQMLDHFAGAFTVLDASDFR 658
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Aste57867_8383 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK61_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.450e-9
Identity = 41/113 (36.28%), Postives = 54/113 (47.79%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKPGQDASSXXXXXXXXXXGGATGSQAPVVRR----PMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            L +TMI G++ VIWC +NYR P     A               T +  P +      P+T +ER   AK  +  L C  ++T S  ++S  E K  LD FAGAFTVL   D R
Sbjct:  629 LLRTMILGIRAVIWCTANYRNPH----AKDLTTMDATNPIAATTPALEPALTETHLYPLTDDERGLIAKVLQNGLRCFILYTLSDSSIS--EEKQMLDHFAGAFTVLDASDFR 735
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BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.080e-9
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 1 
Query:  163 MTSEERNHTAKFFKWALPCLRVFTKSGGA-VSPAESKDALDAFAGAFTVLGPYDLR 327
            M +EER   A+ F+W + CL VFT++  A     E K+A+DAFAGAFTVL PY+LR
Sbjct:    1 MQAEERQLVARLFRWGVQCLSVFTRNPAADADGGEGKEAIDAFAGAFTVLEPYNLR 56
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F948_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.140e-9
Identity = 43/113 (38.05%), Postives = 55/113 (48.67%), Query Frame = 1 
Query:    1 LAKTMIQGLKTVIWCCSNYRQPKP----GQDASSXXXXXXXXXXGGATGSQAPVVRRPMTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLGPYDLR 327
            L +TMI G++ VIWC +NYR P        DA+S            A  S    +  P+T +ER   AK  +  L C  ++T S  +V  AE K  LD FAGA TVL   D R
Sbjct:  615 LLRTMILGIRAVIWCTANYRNPHAKDLTSMDATSTHPPTPFDLATPAASSDTQHLY-PLTDDERALIAKVLQNGLRCFILYTLSDSSV--AEEKQLLDHFAGACTVLDAADFR 724
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78258.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.080e-4785.32protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.520e-4685.32protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.210e-1036.70protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Uncharacterized2.250e-1036.70protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Uncharacterized3.070e-1040.37protein n=1 Tax=Saprolegnia diclina (strain VS20) ... [more]
Phosphatidylinositol3.070e-1037.61kinase (PIK-L3) n=1 Tax=Achlya hypogyna TaxID=1202... [more]
Uncharacterized7.800e-1039.64protein n=1 Tax=Saprolegnia parasitica (strain CBS... [more]
Aste57867_83831.450e-936.28protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Uncharacterized4.080e-953.57protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized9.140e-938.05protein (Fragment) n=1 Tax=Aphanomyces astaci TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs78258contigH-canaliculatus_M_contigs78258:94..420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFI6
PFAMsFAT,FATC,PI3_PI4_kinase
Model size327
Max annot lvl2759|Eukaryota
KEGG koko:K08874
KEGG Pathwayko05166,map05166
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0000166,GO:0003674,GO:0003712,GO:0003824,GO:0004402,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010556,GO:0016043,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016773,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030554,GO:0031248,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0035267,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:0140110,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1903506,GO:1990234,GO:2001141
Exons1
Evalue6.51e-46
EggNOG OGsCOG5032@1|root,KOG0889@2759|Eukaryota
Descriptioninternal peptidyl-lysine acetylation
Cds size315
COG categoryBDLTU
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854119.0285254-CDS-H-canaliculatus_M_contigs78258:93..4081696854119.0285254-CDS-H-canaliculatus_M_contigs78258:93..408Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs78258 94..408 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854119.0451627-UTR-H-canaliculatus_M_contigs78258:408..4201696854119.0451627-UTR-H-canaliculatus_M_contigs78258:408..420Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs78258 409..420 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs78258.1.1prot_H-canaliculatus_M_contigs78258.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs78258 94..408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs78258.1.1

>prot_H-canaliculatus_M_contigs78258.1.1 ID=prot_H-canaliculatus_M_contigs78258.1.1|Name=mRNA_H-canaliculatus_M_contigs78258.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=105bp
MIQGLKTVIWCCSNYRQPKPGQDASSSSSSSSAPSAGGATGSQAPVVRRP
MTSEERNHTAKFFKWALPCLRVFTKSGGAVSPAESKDALDAFAGAFTVLG
PYDLR
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mRNA from alignment at H-canaliculatus_M_contigs78258:94..420-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs78258.1.1 ID=mRNA_H-canaliculatus_M_contigs78258.1.1|Name=mRNA_H-canaliculatus_M_contigs78258.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=327bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78258:94..420- (Hapterophycus canaliculatus Oshoro7m male)
CTCGCGAAGACGATGATCCAGGGGCTCAAGACCGTCATCTGGTGCTGCTC
CAACTACCGGCAGCCCAAGCCCGGCCAGGACGCCTCCTCCTCCTCCTCCT
CATCGTCCGCCCCGAGCGCGGGCGGCGCCACAGGGTCCCAGGCGCCAGTC
GTGCGGCGGCCGATGACCTCCGAAGAGAGGAACCACACGGCCAAGTTTTT
CAAGTGGGCGCTGCCGTGCCTGAGGGTGTTCACCAAGAGCGGGGGCGCCG
TGTCCCCCGCAGAGTCGAAGGACGCCCTGGACGCCTTCGCGGGGGCGTTC
ACCGTGCTGGGGCCGTACGATCTGAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs78258:94..420-

>mRNA_H-canaliculatus_M_contigs78258.1.1 ID=mRNA_H-canaliculatus_M_contigs78258.1.1|Name=mRNA_H-canaliculatus_M_contigs78258.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=315bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78258:94..420- (Hapterophycus canaliculatus Oshoro7m male)
ATGATCCAGGGGCTCAAGACCGTCATCTGGTGCTGCTCCAACTACCGGCA
GCCCAAGCCCGGCCAGGACGCCTCCTCCTCCTCCTCCTCATCGTCCGCCC
CGAGCGCGGGCGGCGCCACAGGGTCCCAGGCGCCAGTCGTGCGGCGGCCG
ATGACCTCCGAAGAGAGGAACCACACGGCCAAGTTTTTCAAGTGGGCGCT
GCCGTGCCTGAGGGTGTTCACCAAGAGCGGGGGCGCCGTGTCCCCCGCAG
AGTCGAAGGACGCCCTGGACGCCTTCGCGGGGGCGTTCACCGTGCTGGGG
CCGTACGATCTGAGG
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