mRNA_H-canaliculatus_M_contigs7824.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7824.1.2
Unique NamemRNA_H-canaliculatus_M_contigs7824.1.2
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: D27-like_C (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4X4_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 2.740e-142
Identity = 201/223 (90.13%), Postives = 209/223 (93.72%), Query Frame = 1
Query:    1 KGATQLRPPLAADFYRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCSCKELGAVVATTCSKQ 669
            +G  QLRPPLAADFY ESLLDKVAL LFR+LVQKEIGYKS++PGY GLIDEAQNYMV+QGASV+DQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTA FTPPFFKFLVGPNKLD RKDDTPGGVFVERCRFLEETNCK      GLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGL+SP MEED+TVPRGCLSGCSCKELGAVVATTCSKQ
Sbjct:   83 EGVAQLRPPLAADFYSESLLDKVALALFRVLVQKEIGYKSEEPGYAGLIDEAQNYMVIQGASVEDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTAFFTPPFFKFLVGPNKLDARKDDTPGGVFVERCRFLEETNCK------GLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCSCKELGAVVATTCSKQ 299          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: D27-like_C (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5X9_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 1.530e-141
Identity = 199/223 (89.24%), Postives = 207/223 (92.83%), Query Frame = 1
Query:    1 KGATQLRPPLAADFYRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCSCKELGAVVATTCSKQ 669
            +G  QLRPPLAADF  ESLLDKVAL LFR+LVQKEIGYKS++PGY GLIDEAQNYMV+QGASV+DQQDM VRVLTTIAGPAVPPVYKLFMAPWPWAPFLTA FTPPFFKFLVGPNKLD RKDDTPGGVFVERCRFLEETNCK      GLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGL+SP MEED+TVPRGCLSGCSCKELGAVVATTCSKQ
Sbjct:    4 EGVAQLRPPLAADFCSESLLDKVALALFRVLVQKEIGYKSEEPGYAGLIDEAQNYMVIQGASVEDQQDMAVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTAFFTPPFFKFLVGPNKLDARKDDTPGGVFVERCRFLEETNCK------GLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCSCKELGAVVATTCSKQ 220          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: D27-like_C (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W0_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.290e-103
Identity = 153/220 (69.55%), Postives = 175/220 (79.55%), Query Frame = 1
Query:   10 TQLRPPLAADFYRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCSCKELGAVVATTCSKQ 669
            TQ R PL   FY E+ LDK++L LFR LVQ+EIG+KS+K GY+GLI+EA NYMVVQ A+ + Q DMV R L TIAGP VPPVY+ FMAPWPWAPFLTA FTPPFFKFLVGPNKLD+R D T GGVFVERCRFLEETNCK      GLCTNMCK+PT++FF++TLG+ MAMEPDFDTYECRLSFGL    M++D  VP+GCL GCS   LGA +   CSKQ
Sbjct:   49 TQPREPLPDGFYHETGLDKLSLALFRNLVQREIGFKSEKEGYEGLIEEAHNYMVVQKATPEQQVDMVQRCLETIAGPLVPPVYRTFMAPWPWAPFLTAFFTPPFFKFLVGPNKLDMRSDGTAGGVFVERCRFLEETNCK------GLCTNMCKLPTQKFFKDTLGMDMAMEPDFDTYECRLSFGLTPLPMDQDPKVPKGCLQGCSSTALGAEIERVCSKQ 262          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: D27-like_C (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA9_9STRA)

HSP 1 Score: 291 bits (744), Expect = 2.570e-93
Identity = 138/204 (67.65%), Postives = 162/204 (79.41%), Query Frame = 1
Query:   13 QLRPPLAADFYRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCS 624
            Q RPPL  +FY ESLLDKVAL LFR LVQ+EIGY S KPGYDGLI+EA++Y +  G + +DQQ MV   L TIAGP VPPVY+ FMAPW WAPFLTA+FTPPFFKFLVGPN+ DVR D   GGV+ ERCRFLEETNCK      GLC +MCK+PT++FF+ETLGL M M PD+DTYECRLSFGL    +E+D ++P+GCL+GCS
Sbjct:   49 QPRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCK------GLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCS 246          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: D27-like_C (domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S9X6_9ALVE)

HSP 1 Score: 216 bits (549), Expect = 3.830e-63
Identity = 112/227 (49.34%), Postives = 147/227 (64.76%), Query Frame = 1
Query:   25 PLAADFYRESLLDKVALGLFRILVQK--------EIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCSCK----ELGAVVATTCSKQ 669
            P++ADFY  +  +K+ALGLFR  VQ+          G   D+  +DGL+ EA++Y++    S ++QQ MV+ VL+ +AGP  P +Y+  MAP+PWAP LT+L TP    FLVGP +  +R+D+  GG +VERCRFL ET CK      GLC NMCK PTERFF +T+GL + M PDF+T EC LSFGL    +EEDETVP GCL GC+      E G V A +C+K 
Sbjct:   86 PVSADFYEMNPFEKLALGLFRTEVQRGTEWSASPAFGLSGDE-SFDGLVKEAKHYVLESRKSGEEQQTMVLGVLSRLAGPFFPQIYRTLMAPFPWAPLLTSLLTPLLLSFLVGPTRWSLREDEQLGGCYVERCRFLAETGCK------GLCVNMCKRPTERFFADTMGLPLTMRPDFETCECTLSFGLVPEPLEEDETVPSGCLGGCTMAGGLAEKGLVSACSCAKS 305          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DSU6_9EUKA)

HSP 1 Score: 210 bits (534), Expect = 6.700e-60
Identity = 113/200 (56.50%), Postives = 137/200 (68.50%), Query Frame = 1
Query:   34 ADFYRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMA--PWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTP-GGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCS 624
            +  Y +S  DK+ALGLFR LVQ+EIGYKS+   Y+GLIDEA+NY + Q AS ++QQ+MVV VL T+AGP  PP+YK  M   P P A FLT+LFTP  F FLVG + L   +DD P  GV V RCRFL ET CK      GLC NMCK PTERFF E +G  M M P+F+T EC LS+GL+   +E+D  VP GCL GC+
Sbjct:  160 SHLYEQSWFDKLALGLFRSLVQREIGYKSESSNYEGLIDEAKNYQLNQRASAEEQQNMVVSVLRTMAGP-FPPLYKAIMPKLPTPLASFLTSLFTPTVFGFLVGESGLSSTRDDRPLQGVKVTRCRFLAETGCK------GLCINMCKKPTERFFREDMGFPMEMRPNFETCECTLSYGLEPLPIEQDMDVPAGCLVGCA 352          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: D27-like_C (domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ09_VITBC)

HSP 1 Score: 199 bits (506), Expect = 4.120e-57
Identity = 97/197 (49.24%), Postives = 133/197 (67.51%), Query Frame = 1
Query:   40 FYRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCSCK 630
            FY  +  +++ALGLFR  VQ++IGY S   GYDGLIDEA+++M+VQ A+   Q+ MV+ VL +++GP +P  ++ F+APWP+ P +T++ TP    FLVGP +++ R+D   GGV V+RCRFL  T CK      GLC NMCK P + +F + LGL M M P+F T EC+LSFGL  P +EED +VP  CL  C  K
Sbjct:   98 FYAMNAWERMALGLFREQVQRQIGYASPMEGYDGLIDEAKHFMLVQNATTSLQEAMVLNVLRSLSGPLLPIFFRTFVAPWPYGPLMTSIVTPLLLSFLVGPVEVNRREDGRLGGVLVKRCRFLAATKCK------GLCLNMCKSPAQTYFRDVLGLDMTMRPNFATCECQLSFGLAPPPIEEDVSVPSDCLGQCGWK 288          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CSW2_9EUGL)

HSP 1 Score: 182 bits (462), Expect = 7.280e-53
Identity = 85/138 (61.59%), Postives = 102/138 (73.91%), Query Frame = 1
Query:   94 VQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGL 507
            VQ+EI Y S   GY G ++EA+ YM    A+ + QQ MV  +L T+ GPAVPPVY+ FMAPWPW+PF TALFTPPFFKFLVGPN+  +R D+  GGV+VERCRFLEET CK      GLC N+CKIPT+ FF ETLG+
Sbjct:    1 VQREIAYVSPLEGYPGFLEEAKYYMTQTKANKEQQQGMVKNILRTVCGPAVPPVYRTFMAPWPWSPFFTALFTPPFFKFLVGPNRWALRNDEALGGVYVERCRFLEETGCK------GLCLNLCKIPTQEFFRETLGM 132          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: D27-like_C (domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CH10_DIALT)

HSP 1 Score: 182 bits (463), Expect = 5.530e-50
Identity = 97/207 (46.86%), Postives = 130/207 (62.80%), Query Frame = 1
Query:   28 LAADFYRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMA---------PWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGC 621
            LA   Y ES LD + L +FR  V+ EIGY SD+P   GL +E + YM+   AS  +QQ MVV VL  +  P  PP Y++FM+         PW WAP LT+  TP FFKFLVGP+  + R D   GG+ VE+CRFL+E+ CK      GLC + CK+P +RFF E LGL + + P+F+T EC+ SFG +   +E+D ++P GCL+GC
Sbjct:  159 LANVTYAESPLDVLLLRVFRACVRDEIGYASDQPAMAGLAEEGRTYML--RASEAEQQQMVVNVLRRLFTPVGPPFYRIFMSGIWGERRLGPWFWAPALTSWVTPLFFKFLVGPSTPNYRADGELGGLVVEKCRFLQESGCK------GLCVHQCKLPAQRFFAEDLGLPLTVSPNFETQECQWSFGEEPLPVEQDVSLPTGCLAGC 357          
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Match: Hypothetical (protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ERT1_CHRCT)

HSP 1 Score: 183 bits (465), Expect = 1.720e-49
Identity = 92/203 (45.32%), Postives = 134/203 (66.01%), Query Frame = 1
Query:   43 YRESLLDKVALGLFRILVQKEIGYKSDKPGYDGLIDEAQNYMVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMA---------PWPWAPFLTALFTPPFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLSGCS 624
            Y E+LLDK  L +FR LVQ++IG+KS   G+DGL++E + YM+   A+ Q Q  MV   L  +  PA+P VYK FM+         PW +AP  TA+ TPPFF FLVGP++ ++R+D  PGG+ VE+CRFL+++ CK      G+C +MCK+P ++FF++ LG+ + + P F+T EC+ SFG      EED  +P+GC+S C+
Sbjct:  240 YSENLLDKFLLFVFRGLVQRQIGFKSALSGFDGLVEEGRYYML--RATEQQQHAMVYNALAGLLTPAMPLVYKPFMSGVLGNRTFGPWFYAPLATAVVTPPFFNFLVGPSRPNLRRDGMPGGLVVEKCRFLQQSQCK------GICMHMCKLPAQQFFQQELGMPLTVSPIFETQECQWSFGEVPLPPEEDPLIPKGCISDCT 434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7824.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D27-like_C2.740e-14290.13domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
D27-like_C1.530e-14189.24domain-containing protein n=1 Tax=Ectocarpus silic... [more]
D27-like_C1.290e-10369.55domain-containing protein n=1 Tax=Tribonema minus ... [more]
D27-like_C2.570e-9367.65domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
D27-like_C3.830e-6349.34domain-containing protein n=2 Tax=Chromera velia C... [more]
Hypothetical6.700e-6056.50protein (Fragment) n=1 Tax=Lotharella globosa TaxI... [more]
D27-like_C4.120e-5749.24domain-containing protein n=1 Tax=Vitrella brassic... [more]
Hypothetical7.280e-5361.59protein (Fragment) n=1 Tax=Eutreptiella gymnastica... [more]
D27-like_C5.530e-5046.86domain-containing protein n=3 Tax=Diacronema luthe... [more]
Hypothetical1.720e-4945.32protein n=2 Tax=Chrysotila carterae TaxID=13221 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7824contigH-canaliculatus_M_contigs7824:1151..4589 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G4X4
PFAMsDUF4033
Model size1287
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.31e-110
EggNOG OGs2CUCH@1|root,2RKQQ@2759|Eukaryota
Cds size507
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7824.1.2prot_H-canaliculatus_M_contigs7824.1.2Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7824 1639..3974 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854118.895737-UTR-H-canaliculatus_M_contigs7824:1150..12161696854118.895737-UTR-H-canaliculatus_M_contigs7824:1150..1216Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7824 1151..1216 +
1696854118.9074712-UTR-H-canaliculatus_M_contigs7824:1539..16381696854118.9074712-UTR-H-canaliculatus_M_contigs7824:1539..1638Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7824 1540..1638 +
1696854118.9615986-UTR-H-canaliculatus_M_contigs7824:3974..45891696854118.9615986-UTR-H-canaliculatus_M_contigs7824:3974..4589Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7824 3975..4589 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854118.9208999-CDS-H-canaliculatus_M_contigs7824:1638..16501696854118.9208999-CDS-H-canaliculatus_M_contigs7824:1638..1650Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7824 1639..1650 +
1696854118.9311113-CDS-H-canaliculatus_M_contigs7824:2399..25491696854118.9311113-CDS-H-canaliculatus_M_contigs7824:2399..2549Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7824 2400..2549 +
1696854118.9414709-CDS-H-canaliculatus_M_contigs7824:3409..35261696854118.9414709-CDS-H-canaliculatus_M_contigs7824:3409..3526Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7824 3410..3526 +
1696854118.9517648-CDS-H-canaliculatus_M_contigs7824:3746..39741696854118.9517648-CDS-H-canaliculatus_M_contigs7824:3746..3974Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7824 3747..3974 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7824.1.2

>prot_H-canaliculatus_M_contigs7824.1.2 ID=prot_H-canaliculatus_M_contigs7824.1.2|Name=mRNA_H-canaliculatus_M_contigs7824.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=169bp
MVVQGASVQDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTALFTP
PFFKFLVGPNKLDVRKDDTPGGVFVERCRFLEETNCKASHRGDGLCTNMC
KIPTERFFEETLGLTMAMEPDFDTYECRLSFGLDSPNMEEDETVPRGCLS
GCSCKELGAVVATTCSKQ*
back to top

mRNA from alignment at H-canaliculatus_M_contigs7824:1151..4589+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7824.1.2 ID=mRNA_H-canaliculatus_M_contigs7824.1.2|Name=mRNA_H-canaliculatus_M_contigs7824.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3439bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7824:1151..4589+ (Hapterophycus canaliculatus Oshoro7m male)
AAGGGGGCAACGCAGCTGCGACCACCGCTTGCGGCTGATTTCTACAGGGA AAGCTTGCTCGACAAGGTGCGATATACTTCGTGTCAATCTGACACTCGAA GGCGGTCTTCTCGTCTTGCCTGCGCAAACATGCACTATTCCATGCAGTGT ATCTTACAAACGCTGTTATAAGAGCTACCACTTCTGGTGATGTCACGAAA TCATACGATCCAGCATTTTCTCCATGTTCAGGGGGTGTTGCTGTAGAACC TGAACAGCATCGACCGTTTCGACGTTCGACCGCAACCTGTACTTCTCAAG AACCACGAGAACGATGCGCTCCCTGTGAACCCCGCAACTTTTTCACCAAT GGAAACCCTCCCCTATTCGAACGCTTCCATTGCTCCAAGGTTGCGCTCGG CCTCTTCCGCATTCTCGTGCAAAAGGAGATCGGGTATAAGTCCGATAAAC CTGGCTACGACGGTCTCATCGATGAAGCCCAGAACTACATGGTGGTACAG GTGGACAGTTCTCAACAAGGTTGCCTATTTGCTCCCCCACTTTCATTTCG TCCTAAAAGGGCACCATGGTGTTGCTGTTTGTGTTGTTCGCGCCCCGTTT TTCCACCGACGTCGTCGGAAAGAAAGCAAGCAAGTGTGGACTGAAAGTCC TTCCGGTATTATTTCTGCCGCACCAACCGTGATCTAGAAGAGCAGCCTAC ATCGGTTCAACGAGGACCTGGAACGAGAACCAGCTTTTATGCATATGCCG CAAGATTCAGAAACACCAAAGTTAGCGCCGTGCGAGGGGATACCACGAGA ACATGTCGTCGGGAATCCTTGATGGAATTCCGGGAATCTAAGCGTATCGG TAGCGTTTGCTTCATGCATCCCAGCGGTACAAGCACAGTTGGCGATCCAG TCGTTTTCGGAGGTGCTGGTCATTGATCCATTCATGTGTTCGGGCGTTGA CCTCACTCACATGCAGCGGGTGCTACAATTAACACTCACCAACATGGCCG ACCAGAAGCTGTTGCGCTTCAACCCACTTTTGGGGCGAGGCATATTCTCA AGGAGACACGGCCTGCGTGCGTAACCCCCATCCTTCCTCGTTTTGTCTGC AGTCGGTCGATTGCTAACCAAGCTCTTTGATAATTTCATCCGCCAATCCC TATCCCATTTTGCCCTTCCCATCCCCTCTCACAACCCCCACATCCCTTTG CCCGTCCGATCTGCCCGGGCTTTTGGACCTCGTCCTGTCGTCATGGCAGG GAGCCTCGGTCCAAGACCAGCAAGATATGGTCGTTCGTGTGCTTACTACC ATTGCCGGCCCCGCCGTCCCCCCGGTATACAAGCTTTTCATGGCTCCGTG GCCCTGGGCGCCCTTTCTTACGGCGCTGTTTACTCCTCCGTTTTTCAAGG TAATATTCCGCCTATCAGCATCAACCCCTTGTTCCTATGTACCGACGCAT CGTGCTTGCTCTTGGCAGCCTCTGAGTCTACGTTTTTCAATAATTGTGTA GTGTCCTCGGAACTTGCTTTGAGTTTGGGCGTGATATCGTTAAAGGTGCC ACCGGTATAGCAACAGGTTTCAGGACGAAATCACATATTGCGCCTCCGGT ATACCAACAGATTTCACGTTGCGCTTCTGATGGTACATAGACTGCCGATG GTGTACATTGCCTCTTTCGGTACAAATTGATTACATTTGAGGGCCGTGTC TTGTAGGCGGGGTACCTGCATGGTGGTTGGGGGCTGGCGTCCTTTAAGAT TGTGATCCATGGAGATTCCAGGACCTAGATTGCAAGCGGGGTTCTGGGTG AGTCAACTGCCGAAACGGACTCCGCTGAAGCGACTTTTTTGTGTCCCCTC TTCAGCGTGTAGACTATTGGAAACCGAAGTGTTCCACCCAGGAGACGCCA CTGATATGTATCGAACAACTTCACTCGGCATCGTTGGGTTTCACACCCTG CGTTGCTTGTCCATGAGAGAATTCTGTGATGCTGCTTTGGGATCCTTCCT GACAAAGTTATGAGCAGACAGGGCACCGCGGTCCCATCAAAATCCAACAC TCAAGGTTCGTCTACGGCCGCCATATTTTTGCTCGAGGTTCTCCACAGAA GTCGCTGTGTACCCTCCAGAACGCCACACCTGCATAACGTGACACCTCTC TCGAACGCCAACCAGTCTAAAGCTTTACTTACCATCATGCATGGCTGCTC ATATCGTCTCCATGCCTTTTGCTGCTGATACATATTGTCCCGCTCGGAAA TCGGTGAAGTTTCTCGTCGGTCCCAACAAACTTGACGTGAGAAAGGACGA CACTCCAGGGGGCGTGTTTGTGGAGAGGTGTCGCTTTTTAGAGGAAACCA ACTGCAAGGCAAGTCACCGTGGGGATGTGGTGTTGTTTCTCTAGCCTCAG GCATTGTAAGCGCTCTGGGTGTTGGATCCAAGCAAGAACAACTGAGCACG CGCAATGGAGATTTAATGTAGATTCGTAGAATCTCGATGGGTTTGAATTA TGGCCATTCTACCCTCTTGCTCGTCGTATAGCATTTGTGGGTGTGCATGT CCACAGCCGTCTCTCACTGGCTCCTGGTTCCATCCTGTCTTATCAGGGTT TGTGTACAAACATGTGCAAGATTCCCACGGAGCGTTTCTTCGAGGAGACT CTCGGGCTGACGATGGCAATGGAGCCAGACTTCGACACGTACGAATGCCG CCTGAGCTTCGGCCTCGATTCCCCAAATATGGAGGAAGACGAGACCGTGC CTCGCGGCTGTCTGTCCGGTTGCAGCTGCAAGGAGCTCGGTGCTGTCGTC GCCACAACTTGTTCCAAGCAGTGAAGTGCCGCAGTAAAGTGCATCCACTT CATTAATATGTTGTAAGCGTCTCCGGTGACCTTCGGAGCCTTTTGGGCAT GACTGACATTTGACGAATCACTCGTACCTGTTCGTTGAGTCGGGGTAGAT CTACGCCAGAATATGGCTACGCACTTAGTTTGTGGAGCGCATTTCCAACA ACGACGCCAGCAGAAGAAGCCACGTCGTTTTCTTCTCTCCCGATTACTTC CACTTATGATCTTCAATTGCTTGCAGCTCTGGCAACGCTGCCCACGAGGC AGGTACCACTCCGTGGCGCTTTTGTGCTCAGGGCGTGGCTTAACTGCACT TTTTCAGACATAGGACGTGGGATGTGGAACTCGGAACGTGATTCTGGTTG ATCGACTGAATACAGCACTTTCCGAGAAAGTGCATTTCCACCTAGGGTTC GTTATTTTGGCGTTCGCGCAGCATGAGTAATTTTTTTTCTTTTTGTTCAT TAAAATTGCCCAACAGTCCATAGGGAACGGGCTGATCAAAGAAAGCGGAG TGACCACATGATCAGACAAAGGGTCGATCGATTCGTCGCTTATAAGCCCG ATGCCGAACGAAACATTATCCCGAAGGGCCCGTACCAAC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7824:1151..4589+

>mRNA_H-canaliculatus_M_contigs7824.1.2 ID=mRNA_H-canaliculatus_M_contigs7824.1.2|Name=mRNA_H-canaliculatus_M_contigs7824.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=507bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7824:1151..4589+ (Hapterophycus canaliculatus Oshoro7m male)
ATGGTGGTACAGGGAGCCTCGGTCCAAGACCAGCAAGATATGGTCGTTCG
TGTGCTTACTACCATTGCCGGCCCCGCCGTCCCCCCGGTATACAAGCTTT
TCATGGCTCCGTGGCCCTGGGCGCCCTTTCTTACGGCGCTGTTTACTCCT
CCGTTTTTCAAGTTTCTCGTCGGTCCCAACAAACTTGACGTGAGAAAGGA
CGACACTCCAGGGGGCGTGTTTGTGGAGAGGTGTCGCTTTTTAGAGGAAA
CCAACTGCAAGGCAAGTCACCGTGGGGATGGTTTGTGTACAAACATGTGC
AAGATTCCCACGGAGCGTTTCTTCGAGGAGACTCTCGGGCTGACGATGGC
AATGGAGCCAGACTTCGACACGTACGAATGCCGCCTGAGCTTCGGCCTCG
ATTCCCCAAATATGGAGGAAGACGAGACCGTGCCTCGCGGCTGTCTGTCC
GGTTGCAGCTGCAAGGAGCTCGGTGCTGTCGTCGCCACAACTTGTTCCAA
GCAGTGA
back to top