mRNA_H-canaliculatus_M_contigs7823.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: Delta (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M5_ECTSI) HSP 1 Score: 185 bits (469), Expect = 5.260e-53 Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 1
Query: 25 VSPTPSPTER---SIASSDCDGDNPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVPGGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMN 456
VSPTP+ + +SS CDG NPC NGGSC+ DPAGGYFCSCA+G+AGM CQ TDG+P W I+L+FEGE+FT + +FQR+A RW VI + PGGG P+ PAG L+IS + + DG GG+LGSAGPTG W +YP ISYSG M+
Sbjct: 346 VSPTPAXXXXXXVAASSSSCDGGNPCQNGGSCSTDPAGGYFCSCAEGFAGMVCQINTDGLPPWYIELEFEGEDFTDDLKAIFQRSAARWERVILYTPGGGTPSTPAGRLLISVTIVAKDGKGGVLGSAGPTGTWWEYPSISYSGIMD 492
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: Ig-like (protein, group 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED2_ECTSI) HSP 1 Score: 159 bits (401), Expect = 1.560e-43 Identity = 91/179 (50.84%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 16 PAPVSPTPSPTERSIASSDCDGDNPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVP--GGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
PAPV T+ S CD NPCMNGGSC DP GGY CSC Y M C+T G+ + I +DF G +T R+ VFQ AA+RW+EV++ +P G AG L I++ L IDG G LG AGP G ++D GISYSG M FD+ DI ME G+FEGVI HEMGHVIG G
Sbjct: 114 PAPV------TDESPGVGACD-PNPCMNGGSCEVDPNGGYTCSCGSSYGAMMCETDVTGMSEFFITVDFLGS-WTDERKGVFQSAANRWSEVLTRIPCSGTNGNRGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 284
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: WSC (domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI) HSP 1 Score: 161 bits (408), Expect = 5.230e-43 Identity = 84/156 (53.85%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 85 NPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVP--GGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
NPCMNGGSC DP GGY CSC Y GM C+T G+ + I +DF G ++ R+ VFQRAA+RW+E+++H+P G AG L I++ L IDG G LG AGP G + D GISYSG M FD+ DI ME G+FEGVI HEMGHVIG G
Sbjct: 404 NPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGT-WSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 558
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: PR1-like (metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI) HSP 1 Score: 161 bits (408), Expect = 5.710e-43 Identity = 84/156 (53.85%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 85 NPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVP--GGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
NPCMNGGSC DP GGY CSC Y GM C+T G+ + I +DF G ++ R+ VFQRAA+RW+E+++H+P G AG L I++ L IDG G LG AGP G + D GISYSG M FD+ DI ME G+FEGVI HEMGHVIG G
Sbjct: 417 NPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGT-WSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 571
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: Putative (zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI) HSP 1 Score: 161 bits (408), Expect = 6.750e-43 Identity = 84/156 (53.85%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 85 NPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVP--GGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
NPCMNGGSC DP GGY CSC Y GM C+T G+ + I +DF G ++ R+ VFQRAA+RW+E+++H+P G AG L I++ L IDG G LG AGP G + D GISYSG M FD+ DI ME G+FEGVI HEMGHVIG G
Sbjct: 508 NPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGT-WSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTG 662
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJN8_ECTSI) HSP 1 Score: 152 bits (384), Expect = 2.760e-40 Identity = 76/158 (48.10%), Postives = 101/158 (63.92%), Query Frame = 1
Query: 85 NPCMNGGSCAADPAGGYFCSCAQGYAGMTCQTATDGIPLWTIQLDFEGE---EFTTSRREVFQRAADRWAEVISHVPGGGA-PNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
NPC+N GSC DP GGY CSC+ Y GM C+T T G+P + I L+F+G +R+++FQ AA RW +V++H+P G P G L+IS IDG+GG GP+ V+ D PG+SY G M FD DI ++E DG EG++ HE+GHVIGVG
Sbjct: 386 NPCLNEGSCEVDPNGGYSCSCSSSYGGMNCETDTTGLPEFFITLEFDGTWDGALDATRKDIFQTAAKRWEKVVTHIPCTGTHPEGATGELIISVTQHEIDGSGGQFALGGPSDVYGDCPGVSYMGVMIFDSDDIDDLEDDGILEGLVVHEIGHVIGVG 543
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5WZA4_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 3.420e-19 Identity = 59/141 (41.84%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 163 GMTCQTATDGIPLWTIQLDFEGEE--------FTTSRREVFQRAADRWAEVIS-HVPGGGAPNWPAGLLV----ISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
G T +T T + + D G + FT ++R F AA RW++VI+ +PG P G V I A++ IDGA GILG AGPT G+ Y+G M FD AD+ ME+DG+F GVI HEMGHV+G+G
Sbjct: 244 GCTIETPTVTGTILNDEADTPGYQVTVVYVGAFTAAQRSAFDAAAARWSQVITGDLPG---VTLPGGTFVDDVQIEASIVPIDGANGILGQAGPTDFRTGVAGLPYAGVMEFDTADVAAMESDGTFRGVIMHEMGHVLGLG 381
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: Peptidase (n=1 Tax=Deinococcus cellulosilyticus NBRC 106333 = KACC 11606 TaxID=1223518 RepID=A0A511NAJ7_9DEIO) HSP 1 Score: 87.4 bits (215), Expect = 2.430e-17 Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 148 AQGYAGMTCQTATDGIPL--WTIQLDFEGEEF-TTSRREVFQRAADRWAEVISH----VPGGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
AQ G + TA P + I LDF + TTS++ +F++AA RW +VI+H + GG LVI A+ +IDG GGILG AGP + + + SG M FD AD++NME G VI HEMGHV+G+G
Sbjct: 45 AQDPFGFSLVTAISEEPSDPFDIDLDFSADTLLTTSQKAIFEQAASRWEQVITHGLSNINDGGTIYDD---LVIKASAVAIDGVGGILGQAGPEFI-RNSNSLPLSGIMQFDSADLSNMETSGILYNVILHEMGHVLGIG 180
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: hypothetical (protein n=1 Tax=Mycolicibacterium mengxianglii TaxID=2736649 RepID=UPI0018EED213) HSP 1 Score: 86.3 bits (212), Expect = 4.690e-17 Identity = 54/108 (50.00%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 238 TTSRREVFQRAADRWAEVI-SHVPGGGAPNWPAGLLVISAALTSIDGAGGILGSAGPTGVWADYPGISY----SGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
T +++ F++AADRW+EVI VP LVI A T IDG GGILG AGPT + G S G M+FD AD+ MEADG+ VITHEMGHVIG+G
Sbjct: 43 TETQKNAFKKAADRWSEVIVGDVPSVLVGGEVIDDLVIEAQGTDIDGPGGILGQAGPTNLRPASAGASAFLPAKGIMSFDTADLAQMEADGTLVDVITHEMGHVIGIG 150
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Match: Probable (pectate lyase C n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RKF3_9PLAN) HSP 1 Score: 86.7 bits (213), Expect = 1.990e-16 Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 151 QGYAGMTCQTATDGIPL--WTIQLDFEGEEFTTSRREVFQRAADRWAEVISHVPGGGAPNW-PAGL-----LVISAALTSIDGAGGILGSAGPTGVWADYPGISYSGSMNFDVADITNMEADGSFEGVITHEMGHVIGVG 546
+G G D +P +TI++ F T S++ +FQ+AADRW+E+I+ G P+ AG+ L I A +IDG GGILG AGP V I +G M FD AD+ N+EA+G VI HEMGHVIG+G
Sbjct: 3886 EGGEGSDIPVPPDPVPTSQYTIEVVFTDTSLTASQQAIFQQAADRWSEIIT----GDVPDVIVAGIGLVDDLRIEATAPAIDGVGGILGQAGPRTVRTG-SFIPATGIMQFDSADLANLEANGQLIDVILHEMGHVIGIG 4020 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7823.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7823.1.1 >prot_H-canaliculatus_M_contigs7823.1.1 ID=prot_H-canaliculatus_M_contigs7823.1.1|Name=mRNA_H-canaliculatus_M_contigs7823.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=182bp VSPPTPAPVSPTPSPTERSIASSDCDGDNPCMNGGSCAADPAGGYFCSCAback to top mRNA from alignment at H-canaliculatus_M_contigs7823:3341..5119- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7823.1.1 ID=mRNA_H-canaliculatus_M_contigs7823.1.1|Name=mRNA_H-canaliculatus_M_contigs7823.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1779bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7823:3341..5119- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7823:3341..5119- >mRNA_H-canaliculatus_M_contigs7823.1.1 ID=mRNA_H-canaliculatus_M_contigs7823.1.1|Name=mRNA_H-canaliculatus_M_contigs7823.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=546bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7823:3341..5119- (Hapterophycus canaliculatus Oshoro7m male)back to top |