mRNA_H-canaliculatus_M_contigs7822.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7822.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7822.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Plastid (ribosomal protein S1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA4_ECTSI)

HSP 1 Score: 657 bits (1695), Expect = 6.750e-236
Identity = 339/373 (90.88%), Postives = 362/373 (97.05%), Query Frame = 1
Query:    1 RVFGALAATATLANGFAFAPSVRCAGSIRPSSSWVGDAQSARTRVSPCRVMTDVDEVVGTETEGDLD-EGPLVEPPNRFDRIKEAYKGVTTALDLSEETAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASLDEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            RV  ALAA+A++ANGFAFAPSVRCAG++RP +SWVG+AQSAR+RV+PCRVMT+VDEVVGTETEGDLD +   VEPPNRFD+IK  YKGVTTALDLSEETAAY+DFQ+LLTD+KVSFERGE+VKGTVIQFEP+GALIDIGAKATAYMPAREASLDEVES+EGLLE+D+ MDVMIISDENEMGQVQVSIRRIQYEKAWSKVE+MQ EDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMK+KFLEV+AENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE
Sbjct:    5 RVIAALAASASVANGFAFAPSVRCAGNVRPGASWVGEAQSARSRVAPCRVMTEVDEVVGTETEGDLDGDVSFVEPPNRFDKIKAQYKGVTTALDLSEETAAYEDFQTLLTDNKVSFERGEIVKGTVIQFEPSGALIDIGAKATAYMPAREASLDEVESMEGLLELDETMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEDMQAEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKYKFLEVNAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 377          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Plastid (ribosomal protein S1 (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z197_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 9.450e-134
Identity = 192/300 (64.00%), Postives = 249/300 (83.00%), Query Frame = 1
Query:  220 PPNRFDRIKEAYKGVTTAL-DLSEETAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASLDEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            P + F+++K  +KG    + D +E+  +Y  F  +L++ +VSF RGE V G V+Q+E  G L+DIGAKA+AY+P REA+L   E IE L  +DD ++ M+ISDENEMGQV +S+RR+++EKAW +V++M   D VF+  ++AVN+GGAIVLVEGLR FLPGSH+CGG+P+E+ VG+++ FKFLEV++E +KLVVSNRRAV+E EM+EL+RGDVVEG +KAIKPYGAFVEIRGMSGLLHISQIS+DRIEDL +I+Q+GM +KCMIIDHDKV GRIALSTKTLEPEPGDM+KNPQKV+D+AE
Sbjct:    1 PTSHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAE 300          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC88_9STRA)

HSP 1 Score: 358 bits (920), Expect = 7.000e-119
Identity = 180/299 (60.20%), Postives = 234/299 (78.26%), Query Frame = 1
Query:  226 NRFDRIKEAYKGVTTALDLSEETAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASL--DEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            +RFDR+K+ YKG    +       +YDDF   + +   SF R +VVKGTV+Q+E  G ++DIGAK++A++P +E+SL   +  ++E L+++D EMD  IIS+E+E GQ+ VS+RRIQY +AW KV   QTED VFE  ++AVNRGGAI LVEGLR FLPGSH+ G LPTED +G+ +  KFLEV+ E++KLVVSNRRAV+EQ+M  LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRIEDL  ++Q G ++KCMIIDHDKVNGRIALSTKTLEPEPGDM+ +  KV+++AE
Sbjct:   39 SRFDRLKKNYKGPQVVVSSEGLDFSYDDFADAVANTDYSFNRNDVVKGTVVQYENGGCVVDIGAKSSAFLPTQESSLFMPQGATLESLVDLDTEMDFQIISEEDENGQLLVSVRRIQYRQAWEKVIAQQTEDEVFEAEVVAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLALKFLEVNQEDNKLVVSNRRAVVEQQMSNLSRGDIIGGVVKALKPYGAFVEVGGMSGLLHISQISYDRIEDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLTDSAKVFELAE 337          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0K1_9STRA)

HSP 1 Score: 356 bits (914), Expect = 9.860e-118
Identity = 183/304 (60.20%), Postives = 235/304 (77.30%), Query Frame = 1
Query:  214 VEPPNRFDRIKEAYKGVTTALDLSEE-TAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASL--DEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            V  P RFDR+K+ +KG       +E     Y DF + +      F R  VV GTV+QFE AG ++DIGAKA+A++P  EA+L  ++ +SIE L+E+D EM V IIS+E+E GQ+ VS+RRIQY +AW KV  +QT D VF+  +IAVNRGGAI LVEGLR FLPGSH+ G LPTED +G+ +  KFLEV+ E++KLVVSNRRAV+EQ+M +LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRI+DL  ++Q G ++KCMIIDHDKVNGRIALSTKTLEPEPGDM+++  KV+++AE
Sbjct:   46 VATPTRFDRLKKNWKGAMPEKVSTENLNFDYSDFDAAVASVSYDFARNSVVSGTVVQFENAGCIVDIGAKASAFLPINEAALVQEQGDSIETLVELDKEMQVQIISEEDENGQLLVSVRRIQYREAWDKVRTLQTTDDVFDATVIAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDIIGQSLPLKFLEVNQEDNKLVVSNRRAVVEQQMADLSRGDIINGMVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDSAKVFELAE 349          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEK7_9STRA)

HSP 1 Score: 352 bits (903), Expect = 4.540e-116
Identity = 173/299 (57.86%), Postives = 231/299 (77.26%), Query Frame = 1
Query:  220 PPNRFDRIKEAYKGVTTALDLSEETAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASLDEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            P  ++DR+   +KG     +L +    YD+F + L      F RG+V+ GTV+QF+  GAL+DIGAKA A+MP REASL  V  +  +L++ +  +  IISDE++ GQ+QVS+RR++++KAW  +  +Q+ED   +  ++ VNRGGAIV V GLR FLPGSH+CG LPT+D +G+ +K KFLEV+ EN+K++VSNRRAV+E +M+EL+RGDVV+G VKAIKPYGAFVEI GMSGLLHISQIS+DRI+DL +I+Q    +KCMIIDHDKVNGRIALSTKTLEPEPGDM+K+ Q+V+D+AE
Sbjct:   51 PLTKWDRMSTNWKGARRTANLDKAGFGYDEFSTFLEGQDYKFARGDVITGTVVQFDFQGALVDIGAKAAAFMPIREASLIPVSDVGEVLDIHESREFQIISDEDDQGQLQVSLRRLEFQKAWDHIMSIQSEDKALDCDVLGVNRGGAIVSVHGLRAFLPGSHLCGVLPTDDIIGQTLKVKFLEVNQENNKIIVSNRRAVVEDQMQELARGDVVQGVVKAIKPYGAFVEISGMSGLLHISQISYDRIDDLSTIIQPNTIIKCMIIDHDKVNGRIALSTKTLEPEPGDMMKDSQRVFDLAE 349          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H459_9STRA)

HSP 1 Score: 352 bits (902), Expect = 8.050e-116
Identity = 179/307 (58.31%), Postives = 236/307 (76.87%), Query Frame = 1
Query:  208 PLVEPPNRFDRIKEAYKGVTTALDLSEETA--AYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASL--DEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            P  +   RFDR+K++YKG    +DLS+E    +Y +F   +     +F R +VVKGTV+Q++  G ++DIGAKA+A++P  EA+L  ++   IE ++++D E D  IIS+E+E GQ+ VS+RRIQY +AW KV  M  +D VFE   + VNRGGAI LVEGLR FLPGSH+ G LPTED +G+ +  KFLEV+ E +KLVVSNRRAV+E++M +LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRI+DL  ++Q G ++KCMIIDHDKVNGRIALSTKTLEPEPGDM+++P +VYDMAE
Sbjct:   53 PKQQQLTRFDRLKKSYKG--PKIDLSDEGLDFSYGEFDEAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPINEAALVLEQGAQIESVIDIDQERDFQIISEEDENGQLLVSVRRIQYREAWDKVVAMNADDGVFEATCVGVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMADLSRGDIINGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGDQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPARVYDMAE 357          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1U6_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.000e-115
Identity = 178/315 (56.51%), Postives = 237/315 (75.24%), Query Frame = 1
Query:  187 EGDLDEGPLVEPPNRFDRIKEAYKGVTTAL---DLSEETAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASLDEV--ESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            E   +E   V  P RFDR+K+ YKG   ++   D+   +  YD F++ + +   SFER  +VKG  IQ+EP G ++DIGAKA+A++P  EA+L +    ++  L+ +++E+D  IISDE+E GQ+ VSIRRIQY  AW  + +MQ ED + E  +++VNRGGAI LVEGLR FLPGSH+ G + TED +G+ +  KFLEV+ EN+KLVVSNR+AV+E +M +LSRGD+VEG V+A+KPYGAF+E+ GMSGLLHISQIS+DRIEDL  ++Q GM +KCMIIDHDKVNGRIALSTKTLEP PGDM+K+  KV++MAE
Sbjct:   36 EAPTEETKAVAQPTRFDRLKKNYKGFKRSVEEEDMDSLSFDYDAFEAAVAETSYSFERNSIVKGQCIQYEPKGVIVDIGAKASAFLPEAEAALIQPVGSTVNDLVNLNEELDFQIISDEDENGQLLVSIRRIQYRSAWETILKMQAEDAILEAEVVSVNRGGAICLVEGLRAFLPGSHLAGKMATEDLIGQKLPLKFLEVNQENNKLVVSNRKAVVETQMADLSRGDLVEGVVQALKPYGAFIEVGGMSGLLHISQISYDRIEDLEQVLQPGMAVKCMIIDHDKVNGRIALSTKTLEPNPGDMLKDSAKVFEMAE 350          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCJ7_9STRA)

HSP 1 Score: 352 bits (904), Expect = 1.220e-115
Identity = 170/272 (62.50%), Postives = 215/272 (79.04%), Query Frame = 1
Query:  301 YDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASLDEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            Y+  +    D   +  RG+ ++GTVIQF P GAL+DIGAKA A+MP REA+L  +  +    ++D+  +  +ISDE+E GQ+ +SIRRI+YEKAW  V   Q ED+ FEG ++ VNRGG I  V+GLR FLPGSH+CG LPTE+ +G ++  KFLEVS EN+KLVVSNRRAV+E +MKELSRGDV++G VKAIKPYGAFVEI GMSGLLHISQIS+DR+ED+ S++QM   +KCM+IDHDKVNGRIALSTKTLEPEPGDM+++ QKVYD+AE
Sbjct:   95 YNAMELAFADQVQAMSRGDRIEGTVIQFNPTGALVDIGAKACAFMPLREAALIPISDVSKSCDIDERREFQVISDEDENGQIMLSIRRIEYEKAWQSVSAAQVEDIAFEGEVVGVNRGGVICEVQGLRAFLPGSHLCGALPTEELIGTILPLKFLEVSEENNKLVVSNRRAVVEDQMKELSRGDVLQGVVKAIKPYGAFVEINGMSGLLHISQISYDRVEDINSVLQMNTLIKCMVIDHDKVNGRIALSTKTLEPEPGDMLRDYQKVYDLAE 366          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QHK0_9STRA)

HSP 1 Score: 352 bits (903), Expect = 1.790e-115
Identity = 180/314 (57.32%), Postives = 237/314 (75.48%), Query Frame = 1
Query:  181 ETEGDLDEGPLVEPPNRFDRIKEAYKGVTTALDLSEETAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASL--DEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            ET G+    P     +RFDR+K AYKG     +      +YDDF S +     +F R +VVKGTV+Q++  G ++DIGAKA+A++P  EASL  ++ + IE L+ VD+E +  IIS+E+E GQ+ VS+RRIQY +AW  V     ED VFE  ++ VNRGGAI LV+GLR FLPGSH+ G LPTED +G+ +  KFLEV+ E +KLVVSNRRAV+E++M +LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRI+DL  ++Q G ++KCMIIDHDKVNGRIALSTKTLEPEPGDM+++P++V++MAE
Sbjct:   80 ETVGEEAVKPKAPQLSRFDRLKAAYKGPQIVKNDEGLDFSYDDFDSAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPTAEASLIMNQGDDIEDLINVDEERNFQIISEEDENGQLLVSVRRIQYREAWDTVIAKNAEDGVFEATVVGVNRGGAICLVDGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMSDLSRGDIITGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGTQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPKRVFEMAE 393          
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BGG1_9STRA)

HSP 1 Score: 350 bits (898), Expect = 2.760e-115
Identity = 175/311 (56.27%), Postives = 236/311 (75.88%), Query Frame = 1
Query:  184 TEGDLDEGPLVEPPNRFDRIKEAYKGVTTALDLSEETAAYDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREASLDEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEEMQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAE 1116
            T G +  G   +P ++F+R++  +KG    +D ++   +YD F++ L D   +F RG+V+ G V+Q+E  GAL+DIGAK+ A+MP REA+L     +   + +D+  D  IIS+E+E GQ+ VSIRR++++ AW KV   Q ED  F+G +I VNRGGAIV V GLR FLPGSH+CG +P+E+ +G+  + KFLEV+ E +KLVVSNRRAV+E +M+ELSRGDVV+G VKAIKPYGAFVEI GMSGLLHISQIS+DRIEDL +++++   +KCMIIDHDKVNGRIALSTKTLEPEPGDM+K+P+ V++ AE
Sbjct:   43 TRGAVTMGAATQPMSKFERLQSRWKGEPRPVDETKAGFSYDAFEAGLGDTSCAFARGDVIPGKVVQYEYQGALVDIGAKSAAFMPLREAALIPDGDVATAVSIDETRDFQIISEEDENGQLLVSIRRLEFQNAWDKVLASQVEDKAFDGEVIGVNRGGAIVNVHGLRAFLPGSHLCGAIPSEEIIGQSFRLKFLEVNQETNKLVVSNRRAVVEDQMRELSRGDVVQGVVKAIKPYGAFVEIAGMSGLLHISQISYDRIEDLSTVVELNSLIKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAE 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7822.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Plastid6.750e-23690.88ribosomal protein S1 n=1 Tax=Ectocarpus siliculosu... [more]
Plastid9.450e-13464.00ribosomal protein S1 (Fragment) n=2 Tax=Tribonema ... [more]
Hypothetical7.000e-11960.20protein n=2 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Hypothetical9.860e-11860.20protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]
Hypothetical4.540e-11657.86protein n=2 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical8.050e-11658.31protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Uncharacterized1.000e-11556.51protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
Hypothetical1.220e-11562.50protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.790e-11557.32protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical2.760e-11556.27protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7822contigH-canaliculatus_M_contigs7822:549..4666 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FRA4
PFAMsS1
Model size1116
Max annot lvl2759|Eukaryota
KEGG koko:K02945
KEGG Pathwayko03010,map03010
KEGG ModuleM00178
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0016020,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0097159,GO:1901363
Exons8
Evalue1.11e-236
EggNOG OGsCOG0539@1|root,2QUY8@2759|Eukaryota
Ec32 ortholog descriptionPlastid ribosomal protein S1
Ec32 orthologEc-26_002420.1
DescriptionRNA binding
Cds size1116
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7822.1.1prot_H-canaliculatus_M_contigs7822.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7822 549..4666 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854118.6546793-CDS-H-canaliculatus_M_contigs7822:548..8841696854118.6546793-CDS-H-canaliculatus_M_contigs7822:548..884Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 549..884 +
1696854118.6696942-CDS-H-canaliculatus_M_contigs7822:2001..21121696854118.6696942-CDS-H-canaliculatus_M_contigs7822:2001..2112Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 2002..2112 +
1696854118.6839035-CDS-H-canaliculatus_M_contigs7822:2569..26651696854118.6839035-CDS-H-canaliculatus_M_contigs7822:2569..2665Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 2570..2665 +
1696854118.69646-CDS-H-canaliculatus_M_contigs7822:3064..31961696854118.69646-CDS-H-canaliculatus_M_contigs7822:3064..3196Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 3065..3196 +
1696854118.7078912-CDS-H-canaliculatus_M_contigs7822:3369..34621696854118.7078912-CDS-H-canaliculatus_M_contigs7822:3369..3462Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 3370..3462 +
1696854118.719179-CDS-H-canaliculatus_M_contigs7822:3628..37231696854118.719179-CDS-H-canaliculatus_M_contigs7822:3628..3723Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 3629..3723 +
1696854118.7306664-CDS-H-canaliculatus_M_contigs7822:4208..43681696854118.7306664-CDS-H-canaliculatus_M_contigs7822:4208..4368Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 4209..4368 +
1696854118.7435575-CDS-H-canaliculatus_M_contigs7822:4573..46661696854118.7435575-CDS-H-canaliculatus_M_contigs7822:4573..4666Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7822 4574..4666 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7822.1.1

>prot_H-canaliculatus_M_contigs7822.1.1 ID=prot_H-canaliculatus_M_contigs7822.1.1|Name=mRNA_H-canaliculatus_M_contigs7822.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=372bp
RVFGALAATATLANGFAFAPSVRCAGSIRPSSSWVGDAQSARTRVSPCRV
MTDVDEVVGTETEGDLDEGPLVEPPNRFDRIKEAYKGVTTALDLSEETAA
YDDFQSLLTDHKVSFERGEVVKGTVIQFEPAGALIDIGAKATAYMPAREA
SLDEVESIEGLLEVDDEMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEE
MQTEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVM
KFKFLEVSAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFV
EIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALST
KTLEPEPGDMIKNPQKVYDMAE
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mRNA from alignment at H-canaliculatus_M_contigs7822:549..4666+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7822.1.1 ID=mRNA_H-canaliculatus_M_contigs7822.1.1|Name=mRNA_H-canaliculatus_M_contigs7822.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4118bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7822:549..4666+ (Hapterophycus canaliculatus Oshoro7m male)
AGGGTTTTCGGTGCGCTGGCGGCGACGGCAACATTAGCCAACGGCTTCGC GTTCGCTCCCTCGGTGCGATGCGCGGGGAGCATCCGACCTAGCTCTTCAT GGGTTGGTGATGCACAGTCTGCGCGGACGCGGGTATCACCGTGCCGGGTG ATGACCGATGTTGATGAGGTGGTGGGGACCGAAACGGAGGGTGACTTGGA CGAGGGGCCTTTGGTTGAGCCCCCTAACCGGTTCGATAGGATCAAGGAGG CGTACAAGGGCGTCACCACGGCCCTGGACCTATCGGAGGAGACGGCAGCT TACGATGACTTCCAGTCACTTCTCACAGACCACAAGGTGAGAGCTTCCTT CTTTTCGATTGCGCCTTGGCGCTTTGTCGCAGACTCTCCCCCGGTTGTTC TCGGTTGTGGTTTTTTTCGCTCATGCGGCTCTTTCCTCCAGTGAGGCGCA TGTTTCCCCTAACCAAATTCTTCGCAATCTAGGCACCCTTGACTAACTCG ACAGTCAGGAGATTGGCGTGTGGGCAGCGCCGAGTTGTAGCCCCGAGAAG CTGGGTGAGGAGCTAGAGTCATCGAGCGAGTCTCGATTGTGTGGCTCTCG GCACGCACTTTTGGGTCTAGCGGGTTGGAGTTGCCTGACGGGTTTATTTA TGCATTCGTGATAGCTGGTGTTCCATGTCTAAACGTCTAAACCTACCCGA CCTGCTGTACCGACTTCTCAACTTATCATTTACTGGAAGTGTTTTACTTG CAGTGTTTTCTTCTCAACCTACCGGTATCAATACCTCAAACACACAAATT CGGTGCCCACGTGCAGCAAACGAGCAACAATGTCGTCCTCCCTCACTAGT AGATACCATTTTGAGGTTTGCGAAAATGGATTGGCGTCACGCACTTGACT TACTATCCAGCTTGCTACAAGTACATTTGCAGCAAAATCAGGACGCCAAA TACTAGCACAGGTGGGTGTGAAACAAACATCAACTAACCCCATGTGTTAG CGAGGCTCTGAAAACTGTTTTTCAACCCCCAAGATTATTTTTTTTAAACC GTTTGTCGATAATGTAGCACAGGTAGTCGTTATCTTGGTTGTAGTTGAGG TTTGAAAAATTATTGATGATAATGATGTCTTAGGGGTCAAATCGCGGTTT TCCGAGCCTCGTTAGTACGCGGCCTAAGGAGTGCCACAGAGTAACTGGTG GGTGTTCGACCGCCCAACCTCTCCTTCGTGTACCTACTTTGAATTAGACT GCTGTTTTTTGCACGGCTAACCGCGGAGCGCAATACTAGTTTGGTTTTTG GAAATTATCTGAACTGCGTGGGCAATTACGGGGTTGGTAAAGGATGGACG GTTGTGCGTCGTGTTGCACCTATGATCGAAGGATTGTGTTAACACCTACG ATACAAGGACGATACACGATGTGTTCCCTCGTTTCTTGATCGTTACCCCG CAGGTCAGCTTCGAGAGAGGGGAAGTGGTGAAGGGGACTGTGATTCAGTT CGAACCAGCGGGAGCCCTTATCGACATCGGAGCAAAGGCAACTGCCTACA TGCCCGCGCGCGAGGTAGAGAAACTTCCAATTCATCAACCCAAAGGATCT GCCGTCGCTCGTTCGAGGACGGTACAAGTAGGATGTCAGTACAAGTATTG TAGCGTTTTTCAATTGGTAGCGCGTCACAAGTTCAAGCTTGTCCTGGCAG GGTATATTTTCTTTTCTCGCCTCTTTCATGTCTTTCGGCGCCACAAAGCG TCATTTAGAATCCTGCCTTGACTCGCCACTTCCGCGCAACGTAAAAACAG TCAAATGATCGATCCTTCTTGGAATCTTGTACCCGGTACACTTGGGCTAC CTGGTACAGCAGTACTTCGTATCAAACTTGATATAAGCTTTCAAGGTAGA GAAACACTGCCCCGTTCGTCGACCCCACAGAGGCATGACTACTGTCTTGG ACGACGCCTCACAGTGTATCCTCTCAATTTTTGTGCCCCTTACCTTTGAC TCTGGTTGTGGTGTTTTCAAGGCGAGTCTGGATGAAGTGGAATCCATCGA GGGACTTCTCGAAGTGGATGACGAGATGGATGTGATGATCATCTCGGACG AAAACGAGATGGGGCAGGTAAATTGCAGCGAATATTGAGTATGATCAAAG GTTCGTGATTATTTTTTTCTGCTGTTGCTTGTCCTTTTCGATTTGCAATG CGCAACTGCTGCTTTGGCCGTCACACGTTTAGTGTGAAATTTTTCCACGG TACAGGTCATGCGCGCTCGCGTATACTTCAAATTCGAAAAGAAAGGCAAA AACTCACGGCATCAGTTCTTGAGATGCGGCTGCTCGTCGTGATTTTGCGG TTGCTGGCTTTCCATCCATGGCTTTCGGCTTCCGCGTGCGAGATGCAGGC ACTCGGGCCTCTTCAACCTTGAAACAAGGTGTCCGGGGTGATACTTTACG TCCCACTTGCTCAAAGCCCTCTCCTTCCCCGCGCCATCATCATCGCCGCT GTTTTGTTTACTACAGGTGCAGGTCTCCATTCGCCGAATTCAGTACGAGA AGGCGTGGTCGAAGGTGGAAGAAATGCAGACGGAAGACGTGGTGTTCGAG GGTCCGATCATCGCCGTAAACCGCGGCGGGGCCATTGTCCTTGTTGAGGT GCGTTTGGGTGTTGCTGGAGCTATCGTAGCTGCACAGCAGTACACCAGAG GGAGACGACAGACTCTCTGGAACCAGATGCGTCTTAAGTGTGCACAACAG AAAAATAAAGCTCCCCTTCTTGCTCTCGTTCCGTTCTTTCCTTGCTTGTT TCACCTTCCCGTGCCTGATAGGGGCTCCGGGGCTTCCTCCCTGGGTCGCA CATGTGCGGTGGGCTCCCGACCGAGGATGCGGTTGGAAAGGTCATGAAGT TCAAATTCCTTGAGGTGGGTTGTGTCTGTTGGAAAATGATTGAATGGTGT GCATGGCACTACGTAAGTTGCATCGAAAGATCTTTACGCGTTAGCTTGAT GCAACTAATTCCACCGGATTTGGTCGTTCTCCCGTCTCGATGCTGTCCCC GCCTACCGCCTGCCATCTCCCCTTCTCTAGGTATCTGCCGAGAACAGTAA GCTTGTAGTGTCTAACCGCCGTGCAGTGCTGGAGCAGGAGATGAAGGAAC TGTCTCGCGGAGACGTCGTCGAGGGGTAAGAAAAATTTTCCAGTTTATCT GGGTTGCCCTTGCCATTTTCGCCTCTTGGTGCGGGGCAGGTCGACCTCGT ACTTCCCCCACCGTGCCATGACCTTTTCTCCACATTTGTGACAAAAGTCG ATAATGTTTGGCTGCAAACTGTATCAGGAATTCTCAAGTATCCATATAGC TCTTCGTTATTTTTTCATGGACGTCAAGTGAGCTTTTATTCTGTTGTTGG ATTTCACAGTAGTGCCGTCATTTGTTGTCTGTTATTCTCGGTGGATCTGT AGGGTGGATACGGAACAACGTCACAATCTGCTTGAGAGTCTTCACCAGCG TTCGCCTTTGTTACCCAAACGCCGGAGCGGACTTCGGCTTTTTTGTGTCA TGGGACCACTGAAACCCTTTGGGTCATGTATCTAACCAACCAGCCTAGCA AATGCTTCGTTGACCAAAACTCCTCCACAACGCTTCGCATTTTATGCTAC TGTGCAACAGCCACGTGAAGGCTATCAAGCCCTACGGAGCGTTCGTGGAG ATTCGCGGCATGTCTGGGCTGCTCCATATCTCCCAGATTTCGTTCGACCG CATCGAGGATCTCCCGTCCATCATGCAGATGGGCATGAAGCTGAAGTGCA TGATCATCGATCACGACAAGGTAATTCGAAATGAATAAGTGACTCCCTTG CCCCCCCCTTCACAGACGCGCACAGTCACAACGAGGCACTGTTTAGAATG AGAGCCCGACCAAGATATCCGTGTCATCCTCAATTTCCATGTTTTGTCTC TGTTGTTTTTAAAATGAGCGCGCTGCTCGAATTCGCAGCAAATGCTGACA TTCCGATGCAATTCACCGAATACAGGTCAACGGCCGTATCGCACTCAGCA CGAAGACCCTGGAGCCCGAGCCTGGAGACATGATCAAGAACCCCCAGAAG GTGTACGACATGGCAGAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7822:549..4666+

>mRNA_H-canaliculatus_M_contigs7822.1.1 ID=mRNA_H-canaliculatus_M_contigs7822.1.1|Name=mRNA_H-canaliculatus_M_contigs7822.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1116bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7822:549..4666+ (Hapterophycus canaliculatus Oshoro7m male)
AGGGTTTTCGGTGCGCTGGCGGCGACGGCAACATTAGCCAACGGCTTCGC
GTTCGCTCCCTCGGTGCGATGCGCGGGGAGCATCCGACCTAGCTCTTCAT
GGGTTGGTGATGCACAGTCTGCGCGGACGCGGGTATCACCGTGCCGGGTG
ATGACCGATGTTGATGAGGTGGTGGGGACCGAAACGGAGGGTGACTTGGA
CGAGGGGCCTTTGGTTGAGCCCCCTAACCGGTTCGATAGGATCAAGGAGG
CGTACAAGGGCGTCACCACGGCCCTGGACCTATCGGAGGAGACGGCAGCT
TACGATGACTTCCAGTCACTTCTCACAGACCACAAGGTCAGCTTCGAGAG
AGGGGAAGTGGTGAAGGGGACTGTGATTCAGTTCGAACCAGCGGGAGCCC
TTATCGACATCGGAGCAAAGGCAACTGCCTACATGCCCGCGCGCGAGGCG
AGTCTGGATGAAGTGGAATCCATCGAGGGACTTCTCGAAGTGGATGACGA
GATGGATGTGATGATCATCTCGGACGAAAACGAGATGGGGCAGGTGCAGG
TCTCCATTCGCCGAATTCAGTACGAGAAGGCGTGGTCGAAGGTGGAAGAA
ATGCAGACGGAAGACGTGGTGTTCGAGGGTCCGATCATCGCCGTAAACCG
CGGCGGGGCCATTGTCCTTGTTGAGGGGCTCCGGGGCTTCCTCCCTGGGT
CGCACATGTGCGGTGGGCTCCCGACCGAGGATGCGGTTGGAAAGGTCATG
AAGTTCAAATTCCTTGAGGTATCTGCCGAGAACAGTAAGCTTGTAGTGTC
TAACCGCCGTGCAGTGCTGGAGCAGGAGATGAAGGAACTGTCTCGCGGAG
ACGTCGTCGAGGGCCACGTGAAGGCTATCAAGCCCTACGGAGCGTTCGTG
GAGATTCGCGGCATGTCTGGGCTGCTCCATATCTCCCAGATTTCGTTCGA
CCGCATCGAGGATCTCCCGTCCATCATGCAGATGGGCATGAAGCTGAAGT
GCATGATCATCGATCACGACAAGGTCAACGGCCGTATCGCACTCAGCACG
AAGACCCTGGAGCCCGAGCCTGGAGACATGATCAAGAACCCCCAGAAGGT
GTACGACATGGCAGAG
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