mRNA_H-canaliculatus_M_contigs78214.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Peptidase (family M50 n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6AB04_9BACT) HSP 1 Score: 182 bits (463), Expect = 1.180e-55 Identity = 87/115 (75.65%), Postives = 101/115 (87.83%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQQPFLGLMFLSLAAGNYQMLQRPY 345
VNAF MP+P+S+L+++T G IE+IG M+ VFFYVLPSVLWALLNL+PVFPLDGGRVM+SLVL+SGDRSDTWIWISLVSAG VA Y L QPF+GL+FLSLA GNYQMLQ+PY
Sbjct: 151 VNAFANMPWPLSNLTRYTGGAPIENIGAMSLVFFYVLPSVLWALLNLLPVFPLDGGRVMRSLVLISGDRSDTWIWISLVSAGAVAIYGLQGGQPFMGLLFLSLAVGNYQMLQQPY 265
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Peptidase (family M50 n=1 Tax=Rhodopirellula solitaria TaxID=2527987 RepID=A0A5C5YGD2_9BACT) HSP 1 Score: 177 bits (450), Expect = 1.220e-53 Identity = 85/116 (73.28%), Postives = 100/116 (86.21%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQ-QPFLGLMFLSLAAGNYQMLQRPY 345
++AF +MP+P++ L +F GE IESI LM VFFYV PSVLWALLNLVPVFPLDGGRVM+SLVLLSGDRSDTW+WIS++SAGG+AFYALT QP +GL+FLSLA GNYQM+Q PY
Sbjct: 154 ISAFASMPWPLNGLGRFFDGEPIESIALMTMVFFYVFPSVLWALLNLVPVFPLDGGRVMRSLVLLSGDRSDTWLWISMISAGGMAFYALTQGGQPIMGLLFLSLAFGNYQMMQTPY 269
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Peptidase (family M50 n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6C5J6_9BACT) HSP 1 Score: 171 bits (432), Expect = 6.420e-51 Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTN-QQPFLGLMFLSLAAGNYQMLQRPY 345
V AF +MP+P+S L G IESI L+ VFFYV PSVLWALLNLVPVFPLDGGRVM+SLVLLSGDRSDTW+WIS++SAG VAFYALT QP +GL+FLSL GNYQM+Q PY
Sbjct: 154 VAAFGSMPWPLSQLDGVFDGRPIESIALLTMVFFYVFPSVLWALLNLVPVFPLDGGRVMRSLVLLSGDRSDTWLWISMISAGAVAFYALTQGHQPIMGLLFLSLGFGNYQMMQNPY 269
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Zn-dependent (protease n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5TAK9_9BACT) HSP 1 Score: 165 bits (418), Expect = 8.110e-49 Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTN-QQPFLGLMFLSLAAGNYQMLQRPY 345
V AF MP+P++ L + GE++ S+GLMA + FYV PSVLWALLNL+PVFPLDGGRVM+SLVL+SGDR DTW+WIS+ SAG VAFYALT QP +GL+FLSL GNYQM+Q PY
Sbjct: 153 VIAFALMPWPLNGLRPWFEGEQVASVGLMAAILFYVFPSVLWALLNLLPVFPLDGGRVMRSLVLMSGDRGDTWLWISMASAGVVAFYALTQGHQPIMGLLFLSLGFGNYQMMQSPY 268
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Peptidase (M50 n=1 Tax=Rhodopirellula sallentina SM41 TaxID=1263870 RepID=M5U0L0_9BACT) HSP 1 Score: 165 bits (417), Expect = 1.150e-48 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQ-QPFLGLMFLSLAAGNYQMLQRPY 345
V AF AMP+P+ L + G+ + SIGL A +FFYV PSVLWALLNLVPVFPLDGGRVM+SLVL+SGDR DTW+WIS+VSAG VAFYALT P +GL+FLSL GNYQM+Q PY
Sbjct: 153 VTAFYAMPWPLDRLVSWFPGKPVTSIGLNATIFFYVFPSVLWALLNLVPVFPLDGGRVMRSLVLMSGDRGDTWLWISMVSAGAVAFYALTQGGAPIMGLLFLSLGFGNYQMMQSPY 268
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Peptidase (M50 n=8 Tax=Rhodopirellula TaxID=265488 RepID=L7C9P4_RHOBT) HSP 1 Score: 142 bits (358), Expect = 8.200e-40 Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQQPFLGLMFLSLAAGNYQMLQRP 342
V AF MPYP+S + G ES+GL A V FYV PSV+WA+LNL+PVFPLDGGR+M+SLV++ G ++DTW+WIS++ G Y ++ FLG++FLSLA GNYQMLQ P
Sbjct: 150 VMAFALMPYPLSSIPGILEGNDFESVGLFALVTFYVWPSVIWAVLNLIPVFPLDGGRIMRSLVMMGGGQTDTWLWISMIVGGACTAYGFSSGNMFLGILFLSLAVGNYQMLQGP 263
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Zinc (metalloprotease n=1 Tax=Rhodopirellula islandica TaxID=595434 RepID=A0A0J1EKK4_RHOIS) HSP 1 Score: 139 bits (349), Expect = 1.850e-38 Identity = 60/112 (53.57%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQQPFLGLMFLSLAAGNYQMLQ 336
+ AF MPYP+ L G +S+G++A V FYV PSVLWA+LNL+PVFPLDGGR+M+SLV++ G ++DTW+WIS++ G Y ++ FLG++FLSLA GNYQM+Q
Sbjct: 150 ITAFALMPYPLDSLPGVLEGNDFDSVGMIALVTFYVWPSVLWAVLNLIPVFPLDGGRIMRSLVMMGGGQTDTWLWISMIIGGACTMYGFSSGNMFLGILFLSLAVGNYQMMQ 261
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Peptidase (n=1 Tax=Rhodopirellula bahusiensis TaxID=2014065 RepID=A0A2G1VZ28_9BACT) HSP 1 Score: 139 bits (349), Expect = 1.850e-38 Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQQPFLGLMFLSLAAGNYQMLQ 336
V AF MPYPI+ L G +++G+ A V FY+ PSVLWA+LNL+PVFPLDGGR+M+SLV++ G ++DTW+WIS++ G Y T+ Q FLG++FLSL GNYQM+Q
Sbjct: 150 VMAFALMPYPINALPGVLEGNDFDNVGMFALVTFYIWPSVLWAVLNLIPVFPLDGGRIMRSLVMMGGGQTDTWLWISMIVGGACTMYGFTSGQMFLGILFLSLTVGNYQMMQ 261
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: site-2 (protease family protein n=2 Tax=unclassified Rhodopirellula TaxID=2624920 RepID=UPI001E323FFD) HSP 1 Score: 135 bits (340), Expect = 7.230e-37 Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 1 VNAFNAMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQQPFLGLMFLSLAAGNYQMLQ 336
V AF+ MP+P + G I+S GL+A V FYV PSVLWA LNL+PVFPLDGGR+M+SLVL+ G ++DTW+WIS++ G Y Q FLG++FLSLA GNYQMLQ
Sbjct: 174 VLAFSLMPWPFYLIPGVLEGNDIDSPGLLALVTFYVWPSVLWAALNLIPVFPLDGGRIMRSLVLMGGGQTDTWLWISMIVGGACTIYGFQGGQMFLGILFLSLAVGNYQMLQ 285
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Match: Peptidase (family M50 n=1 Tax=Planctomycetes bacterium CA13 TaxID=2527986 RepID=A0A5C5Z6N2_9BACT) HSP 1 Score: 128 bits (322), Expect = 2.220e-34 Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 16 AMPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGRVMKSLVLLSGDRSDTWIWISLVSAGGVAFYALTNQQPFLGLMFLSLAAGNYQMLQR 339
AMP +S + GE I+SIGL A V FY+ PSVLWALLNLVPV+PLDGGR+M S+VL+ G R D +WIS+++AG + Y N Q FLG++FLSLA NYQ+LQ+
Sbjct: 156 AMPLGLSRIFSVLDGEPIQSIGLYAMVLFYIFPSVLWALLNLVPVWPLDGGRIMNSVVLIGGGRRDQALWISVIAAGLLTAYGFKNGQTFLGILFLSLAISNYQVLQQ 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78214.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs78214.2.1 >prot_H-canaliculatus_M_contigs78214.2.1 ID=prot_H-canaliculatus_M_contigs78214.2.1|Name=mRNA_H-canaliculatus_M_contigs78214.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=110bp MPYPISDLSQFTTGERIESIGLMAGVFFYVLPSVLWALLNLVPVFPLDGGback to top mRNA from alignment at H-canaliculatus_M_contigs78214:155..502- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs78214.2.1 ID=mRNA_H-canaliculatus_M_contigs78214.2.1|Name=mRNA_H-canaliculatus_M_contigs78214.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=348bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78214:155..502- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs78214:155..502- >mRNA_H-canaliculatus_M_contigs78214.2.1 ID=mRNA_H-canaliculatus_M_contigs78214.2.1|Name=mRNA_H-canaliculatus_M_contigs78214.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=330bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78214:155..502- (Hapterophycus canaliculatus Oshoro7m male)back to top |