prot_H-canaliculatus_M_contigs78190.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs78190.1.1
Unique Nameprot_H-canaliculatus_M_contigs78190.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length104
Homology
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: A0A6H5KEK1_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK1_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 7.700e-22
Identity = 93/103 (90.29%), Postives = 94/103 (91.26%), Query Frame = 0
Query:    1 MKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRSRSPDRQRTSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDLKKRYGDASASKR 103
            MKREREASQAVGKDYAARP SYKGSLSLKLDRYTQRRKSRSRSPDRQRTS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +LKKRYGDASASKR
Sbjct:  539 MKREREASQAVGKDYAARPASYKGSLSLKLDRYTQRRKSRSRSPDRQRTS-----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKKRYGDASASKR 636          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: D7FPC2_ECTSI (Tudor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC2_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 8.300e-20
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 MKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRSRSPDRQRTS 50
            MKREREASQAVGKDYAARP SYKGSLSLKLDRYTQRRKSRSRSPDRQRTS
Sbjct:  517 MKREREASQAVGKDYAARPASYKGSLSLKLDRYTQRRKSRSRSPDRQRTS 566          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: A0A7S2W6Z5_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6Z5_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.410e-11
Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    2 KREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRSRSPDR 46
            KR+RE S A GKDYA RP SYKGSLSL LDRYT R+KSRSRSPDR
Sbjct:  414 KRDRERSAAQGKDYAQRPASYKGSLSLALDRYTHRKKSRSRSPDR 458          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: A0A835ZJP1_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.680e-11
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    4 EREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRSRSPDRQR 48
            +R+AS AVGKDYA+RP SYKGSLSLK DR+T RRKS SRSPDR R
Sbjct:  260 DRKASTAVGKDYASRPTSYKGSLSLKADRFTVRRKSSSRSPDRAR 304          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: A0A7S2FY12_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FY12_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.130e-9
Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRSRSPDR 46
            +KR + ++ A GKDYA RP SYKGSLSL +DR+T R+KSRSRSPDR
Sbjct:  104 LKRGQGSAAATGKDYAQRPASYKGSLSLTMDRFTHRKKSRSRSPDR 149          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: A0A5D6XEX5_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XEX5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.650e-9
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 REREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRS 41
            +ER  ++AVG+DYAARP SYKGSLSLKLDRYT RR+SRS
Sbjct:  370 KERRKAEAVGRDYAARPASYKGSLSLKLDRYTTRRRSRS 408          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: A0A2P4YQH6_9STRA (Pre-mRNA-splicing factor 38B (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQH6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.670e-8
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 REREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRS 41
            RER  ++AVG+DYA+RP SYKGSLSLKLDR+T R++SRS
Sbjct:   45 RERRKAEAVGRDYASRPASYKGSLSLKLDRWTTRKRSRS 83          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: K3WW49_GLOUD (Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW49_GLOUD)

HSP 1 Score: 59.7 bits (143), Expect = 3.380e-8
Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 REREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRS 41
            +ER  ++AVG+DYAARP SYKGSLSLKLDR+T RR+SRS
Sbjct:  391 KERRKAEAVGRDYAARPASYKGSLSLKLDRFTTRRRSRS 429          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: W2PEB6_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEB6_PHYPN)

HSP 1 Score: 58.2 bits (139), Expect = 3.440e-8
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 REREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRS 41
            RER  ++AVG+DYA+RP SYKGSLSLKLDR+T R++SRS
Sbjct:   87 RERRKAEAVGRDYASRPASYKGSLSLKLDRWTTRKRSRS 125          
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Match: A0A482SKP9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKP9_9ARCH)

HSP 1 Score: 59.3 bits (142), Expect = 4.670e-8
Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    4 EREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRS 41
            EREAS AVGK+YA RP SYKGSLSLKLDRYT R+KS S
Sbjct:  455 EREASAAVGKNYAQRPASYKGSLSLKLDRYTARKKSPS 492          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78190.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEK1_9PHAE7.700e-2290.29Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FPC2_ECTSI8.300e-2098.00Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2W6Z5_9STRA1.410e-1180.00Pre-mRNA-splicing factor 38 n=1 Tax=Rhizochromulin... [more]
A0A835ZJP1_9STRA5.680e-1177.78Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S2FY12_9STRA1.130e-967.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5D6XEX5_9STRA9.650e-976.92Pre-mRNA-splicing factor 38 n=1 Tax=Pythium brassi... [more]
A0A2P4YQH6_9STRA1.670e-871.79Pre-mRNA-splicing factor 38B (Fragment) n=1 Tax=Ph... [more]
K3WW49_GLOUD3.380e-874.36Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangiu... [more]
W2PEB6_PHYPN3.440e-871.79Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A482SKP9_9ARCH4.670e-881.58Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs78190contigH-canaliculatus_M_contigs78190:123..434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs78190.1.1mRNA_H-canaliculatus_M_contigs78190.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs78190 117..434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs78190.1.1 ID=prot_H-canaliculatus_M_contigs78190.1.1|Name=mRNA_H-canaliculatus_M_contigs78190.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=104bp
MKREREASQAVGKDYAARPVSYKGSLSLKLDRYTQRRKSRSRSPDRQRTS
ERGGGGGRSGGERQRAAEPSPPRRKAAPVVTAEELRRQQDLKKRYGDASA
SKR*
back to top