mRNA_H-canaliculatus_M_contigs7817.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE) HSP 1 Score: 414 bits (1063), Expect = 6.640e-142 Identity = 223/291 (76.63%), Postives = 252/291 (86.60%), Query Frame = 1
Query: 1 TCLRRRALIRTVGGALASIA----VLGRPPEASAAGMAVASRPAKKRSPAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDKV 861
T L RRAL+RT+GGALAS+A + P +A+AAG AV RP KRSP FLCD AVSYLYNPT +SE+WLVGTAHISNSSATLVENVIR IKPQVVMVELDA+RVGSF++ SK+G++++ G++ APP R PFFGAFFKQLLDP V VNDRIT+FFA ALGKAISKMYESMDQKGLSSGQEFTIAI+EARACGAK+LLGDRDV++TLRRLSEALR IDLQ+++QS QMETG+GLEALDGSS ESINSSL+ILKNRETMRKVI FYK+EAPELYNAMIGERDKV
Sbjct: 69 TQLDRRALLRTIGGALASLASASALTASPQQAAAAGTAVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVGSFMKPSKQGEKTLADGT--GKEIAPPAERTRNPFFGAFFKQLLDPKVPVNDRITDFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRKIDLQKISQSGQMETGLGLEALDGSSVESINSSLDILKNRETMRKVIGFYKEEAPELYNAMIGERDKV 357
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EEF9_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.450e-40 Identity = 109/271 (40.22%), Postives = 149/271 (54.98%), Query Frame = 1
Query: 130 SPAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIE---ASKKGDESVTVDY-------------------EGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELA----QSSQMETGMGLE-ALDGS-SKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
+P LCD A+S L + I LVGTAHIS+ SA LV ++IR ++P+ V VELDAKRVG F+E + K+GD ++ + G AP P + F A + L ++ R E A A+G A+ MY +D+ G SSG+EF +AI G+KI+LGDRDVQVTL RLSEAL +D +L S M GMG A G SKE ++ +E LK RE +R +++ K+E PELY A++ ERD+
Sbjct: 86 APPRLCDQAISELTLDGVT--IRLVGTAHISDESALLVGDIIRTVRPETVFVELDAKRVGRFLEKDGSGKQGDRTLAPTPVEPTSSRGWGVVRDPVSAPQAGTSVAPAPSTEKLGIFSAI-RTGLGKKIASLYRAAE--AAAVGSALQSMYSQLDKIGFSSGEEFKMAIETGSEIGSKIVLGDRDVQVTLNRLSEALEIVDWNKLTTMTIDDSIMPKGMGQNSAASGDISKEDLSQVVEALKTRENVRSIMNSLKKELPELYTALVAERDE 351
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Pheromone (shutdown, TraB n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP6_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.580e-37 Identity = 102/286 (35.66%), Postives = 148/286 (51.75%), Query Frame = 1
Query: 133 PAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVG-------------SFIEASKKGDESVTVDYEGGEKSAPPPGR-----------KPTP---------------FFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDL---QELAQSSQMETGMGLEALD---GSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERD 855
P+ LCD A+S+L NP +I+++GTAHISN+SA LV + IR+++PQ VM+ELDA R+G S + S+ V V + PP +P P F A +L +R+ A +G+ IS +Y +D+ G SGQEF +AI E R GA +LLGD+DVQVTLRRLS+AL +L +E+ ++ LEA G + I+ ++E LK R ++R +++ +QE PE+Y AMI ERD
Sbjct: 118 PSGLCDDAISHLRNPKTGQDIYMIGTAHISNASALLVRSTIRELRPQTVMLELDASRIGRLAKNTSNSIPKPSSMGRSEPSRRVVIVASSSSDSPDVPPATFVIPGPASTALQPPPSDPGFLSKQEEGKAGFLRAALGELTRVGSGFRERLVGLGAMVVGQVISGLYRGLDKMGFVSGQEFIVAIDEGRKVGADLLLGDQDVQVTLRRLSDALSRSELGKVREMESPTRSPAARELEARGIRMGDNAADISVAMEALKERSSVRTLMASLQQELPEVYKAMIEERD 403
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1T6_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.050e-35 Identity = 106/308 (34.42%), Postives = 161/308 (52.27%), Query Frame = 1
Query: 52 SIAVLGRPPEASAAGM-AVASRPAKKRSPAF--LCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFI---EASKKGDESVTVDYEGGEK----------SAP-------------PPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQEL-AQSSQME---------TGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
SIAV P AS A + + P+K SP LCD +VS NP+ ++++GTAHIS++SA + ++RD KP V VELDAKRVG I S K +++ GE SAP PP +P P F ++ +++ + +G +I +Y ++ +G S+G+EF +A+ E G+ I+LGD+DV+VTLRRL+EAL DL++L A S+ME +G +E S E + +E +K RE ++ ++S + APE+YNAM+ ERD+
Sbjct: 86 SIAVASANPFASFAETETLVTTPSKSSSPVSSPLCDPSVSTFRNPSNNRVVYILGTAHISSASADVAGQLVRDTKPSAVFVELDAKRVGRAIPKPSVSGKTSGDISISDTAGEAAPETATPVLVSAPISSPVVNVVEVEVPPSSRPPPTKSNPF--------NLKEKLLNNASKLVGNSIKGLYSKLESEGFSAGEEFVVAVREGLKIGSTIVLGDQDVEVTLRRLTEALSKTDLKKLLAADSEMEQNMKQLMPDSGKAIETTGEMSSEQLTYFVETIKARENVKLLMSNLQSVAPEIYNAMVKERDE 385
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0R5_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.490e-34 Identity = 80/239 (33.47%), Postives = 138/239 (57.74%), Query Frame = 1
Query: 145 CDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQL-LDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
C+ AV++L ++++++GTAHIS++SA LV+ VI+ +KP VM+ELD RV K ++ +E + G K G F + + S +++R+ F AG +G IS +Y+S+D++G SSG+EF +AI EA A ++LGDR + TL+RL++A+ DL + + L +L+ + +++ ++EILK RE ++ ++ + PELY A++ ERD+
Sbjct: 65 CEQAVTHLKKSG--TDMYIIGTAHISSASALLVKEVIQQVKPGYVMLELDPSRV-----KLAKRNQDANTQFESADA-----GSKKGMNTGLFSEAFSVTQSTPISERLVSFTAGLVGTVISTLYKSLDKRGFSSGEEFKVAIEEAGKINASVILGDRPAKETLKRLAQAISVSDLSQKSSGDMSSIEAALASLNYADNQALAETVEILKERENVKTMMKLLSDQVPELYKALVTERDE 291
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ECZ5_TRICV) HSP 1 Score: 137 bits (344), Expect = 8.370e-34 Identity = 101/261 (38.70%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 142 LCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFI--EASKKGDESVTVDYEGGEKSAPPPGRKPTP---FFGAFFKQLLDPSVSVN-----DRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLEAL---DGSSKESINSSL---------EILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
LCD +V+ N + LVGTAHIS SA L V+R++KP V VELD KR+ + ++ ++G EGG ++ G P A +Q P VN +R+ E A+G AI +Y + +G + G+EF +AISEA AK++LGDRDV VTLRRL+EAL DL++L +S E L+A D S S++ SL E +K RE +R V+S K APELY AM+ ERD+
Sbjct: 122 LCDPSVTTWRNAADGRVVHLVGTAHISEDSAALASRVVREVKPDAVFVELDRKRIARALPPQSVREGGGGEGASSEGGSPTSGGEGFADGPGASSAAAQMEQQQAPPKRVNPFAVRERLMEAGTRAVGDAIKGVYAKLGSEGFNPGEEFVLAISEAMKINAKVVLGDRDVDVTLRRLTEALARTDLKKLT-ASDSELERSLKAFVPDDMKSDVSMDRSLTRDQLSRYVETVKARENVRAVMSQLKAAAPELYGAMVAERDE 381
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LCG8_9EUGL) HSP 1 Score: 133 bits (335), Expect = 1.230e-32 Identity = 91/263 (34.60%), Postives = 147/263 (55.89%), Query Frame = 1
Query: 82 ASAAGMAVASRPAKKRSPA-FLC-DGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMETGMGLE---ALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERD 855
A+A G + ++P+ S A +C D AVS+L P + E++L+GTAHISN SA LV+NV+R+++P+ VM+ELDA R+ + S G + V A R L S R+ + A +G ++ Y +++Q G SGQEF +A+ EA+A A I+LGD+ + +TL+RL +AL DL ++ + +E AL+ SK + ++E+LK R +R++++ KQ+ PE+Y A++ ERD
Sbjct: 124 AAAIGWTLFTQPSTAASAASVVCTDQAVSHLVGPNGR-EVFLIGTAHISNISAELVKNVVREVRPETVMLELDAGRIKMAPDGS--GPQEGVVGSRASLSLAERARR-----------DLFTGSKPFGVRLQKLQADLIGGLLAAFYSALNQMGFDSGQEFIVALQEAKALNANIVLGDQPIDITLQRLQQALAVSDLSKMFSPPDSMNEVEIEVAQALNSGSKAELAGAVELLKQRSQVRELVAVMKQQLPEVYQALLAERD 372
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC05_AURAN) HSP 1 Score: 130 bits (326), Expect = 3.800e-32 Identity = 88/242 (36.36%), Postives = 132/242 (54.55%), Query Frame = 1
Query: 142 LCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQEL----AQSSQMETGMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERD 855
LCD AVS L N KS ++LVGTAH+S+ SA LV I ++P +VMVELD KRV F GGE P P P V R+ F GA+ + +Y+S+++ GL +G+EF +A+ +AR+ G +LL DRDV TLR + +A+R ++L A S G A+D +S++S+ S++E++K RET+R +++ + AP LY+A++ RD
Sbjct: 52 LCDEAVSALANG--KSTVYLVGTAHVSDVSARLVAETIDAVRPTLVMVELDGKRVQGF----------------GGEAPGPATPLAPAP---------------VGQRLGAFVVGAV---LRSLYKSLERLGLDTGEEFAVALRKARSAGVPVLLADRDVDETLRLVGDAVRKTTSKDLENFEAALSPALAGDLTRAVDVASRDSVASTVELVKKRETVRTIVAALEANAPALYDALVDSRD 257
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QFI7_9CRYP) HSP 1 Score: 123 bits (309), Expect = 1.030e-30 Identity = 79/230 (34.35%), Postives = 122/230 (53.04%), Query Frame = 1
Query: 160 SYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPP--PGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMET-GMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAM 840
++L+N +I+L+GTAHIS +SA V ++IR ++P +MVELD RV SA P ++PT + ++ L + DRI A +G AI+ +Y +++ G SSGQEF AI EARA A ++LGDR V+ TL RL +A+ ++ L L + G +D K +I S++E+LK R +R V++ K + PE+Y A+
Sbjct: 1 TFLFNKATGQQIYLIGTAHISEASANQVRDIIRAVRPDAIMVELDESRVSP---------------------SAAPGVASQEPTSLWEILRREALRTDAPILDRIRSAEADIIGLAIASLYRKLNRMGFSSGQEFATAIREARASNATLILGDRGVRQTLNRLQQAIETVGLPRLTAFVRARADGPESARIDMEDKSAIESTVEVLKERGNVRAVMAALKADLPEIYEAV 209
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC86_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.050e-29 Identity = 87/262 (33.21%), Postives = 142/262 (54.20%), Query Frame = 1
Query: 82 ASAAGMAVASRPAKKRSPAFLCDGAVSYLYNPTIKSEIWLVGTAHISNSSATLVENVIRDIKPQVVMVELDAKRVGSFIEASKKGDESVTVDYEGGEKSAPPPGRKPTPFFGAFFKQLLDPSVSVNDRITEFFAGALGKAISKMYESMDQKGLSSGQEFTIAISEARACGAKILLGDRDVQVTLRRLSEALRSIDLQELAQSSQMET---GMGLEALDGSSKESINSSLEILKNRETMRKVISFYKQEAPELYNAMIGERDK 858
A+AA + +RPA PA CD AV+ N ++++VGTAH+S SA LV I ++P +VM+ELD KR+ A+ S P P R+P S+ +R + G+L +S +Y+S+D GL+SG+EF++A+++AR +ILL DRDV TLRRLS A++ Q+ + + T GM E +D K S+ ++E +K R T++++++ ++ P +Y+A++ ERD+
Sbjct: 30 ATAAALGTRARPAVAVPPA--CDDAVAVWSNGN--RQVYIVGTAHVSEKSAELVAQTIDAVQPTLVMLELDRKRLKGAPAAASSA-------------STPQPPRRP----------------SLLERTGAWVVGSL---LSSLYKSLDDLGLNSGREFSVALTKARENNIQILLADRDVDETLRRLSAAIQQTSSQDFERFEALATTISGMA-EPVDLGDKNSVTGAIETIKTRSTVKELVNDLRESLPNIYSALVDERDE 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7817.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7817.1.1 >prot_H-canaliculatus_M_contigs7817.1.1 ID=prot_H-canaliculatus_M_contigs7817.1.1|Name=mRNA_H-canaliculatus_M_contigs7817.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=287bp TCLRRRALIRTVGGALASIAVLGRPPEASAAGMAVASRPAKKRSPAFLCDback to top mRNA from alignment at H-canaliculatus_M_contigs7817:1761..5056+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7817.1.1 ID=mRNA_H-canaliculatus_M_contigs7817.1.1|Name=mRNA_H-canaliculatus_M_contigs7817.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3296bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7817:1761..5056+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7817:1761..5056+ >mRNA_H-canaliculatus_M_contigs7817.1.1 ID=mRNA_H-canaliculatus_M_contigs7817.1.1|Name=mRNA_H-canaliculatus_M_contigs7817.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=861bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7817:1761..5056+ (Hapterophycus canaliculatus Oshoro7m male)back to top |