prot_H-canaliculatus_M_contigs7808.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7808.1.1
Unique Nameprot_H-canaliculatus_M_contigs7808.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length119
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7808.1.1 vs. uniprot
Match: A0A6H5JUE2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.710e-12
Identity = 39/114 (34.21%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    3 FTVLGNLAKGEKADGSRRVRSFERGKDGMIVSTKARLVARVLCLGKVLIYVKTPAPTPAAASVKIVVAVDNELGCRVRHLDTEHAFTRAELRCPVCTKLPGGCSDLSGRIPRLE 116
            F  +  L +G KA GS+ V S++  + G+IV +KAR+VAR       + +  + +  P+AAS+K V+AV  E G ++ H D + A+  A+L   +  + P GC  +SG++ ++E
Sbjct:   48 FPKVKELPEGRKAIGSKWVFSWKTNEKGLIVDSKARMVARGFSRIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLTEEIYLRFPEGCGSMSGKVVKVE 161          
BLAST of mRNA_H-canaliculatus_M_contigs7808.1.1 vs. uniprot
Match: A0A6H5JU20_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU20_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.240e-8
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 0
Query:   36 KARLVARVLCLGKVLIYVKTPAPTPAAASVKIVVAVDNELGCRVRHLDTEHAFTRAELRCPVCTKLPGGCSDLSGRIPRLE 116
            K RLVAR       + Y  + +P P++AS+K+++AV+NE G  + H D + A T A L   V  +LP GC D S +I + E
Sbjct:  245 KTRLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVENEKGMNLNHWDVKQAHTHATLDEEVFLRLPAGCGDKSHKIAKAE 325          
BLAST of mRNA_H-canaliculatus_M_contigs7808.1.1 vs. uniprot
Match: A0A6H5KMY7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY7_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 7.250e-7
Identity = 35/114 (30.70%), Postives = 61/114 (53.51%), Query Frame = 0
Query:    3 FTVLGNLAKGEKADGSRRVRSFERGKDGMIVSTKARLVARVLCLGKVLIYVKTPAPTPAAASVKIVVAVDNELGCRVRHLDTEHAFTRAELRCPVCTKLPGGCSDLSGRIPRLE 116
            F+ +    +G +   S+   S++  K+G   + KARLVAR L     + Y  + +P P++AS+K+++AV+NE G  + H D + A+T A L     ++ P      S +I + E
Sbjct:  723 FSFVDGAPEGRRPVSSKWCFSWKTNKEGKKYTLKARLVARGLSQIPNVDYFHSSSPCPSSASIKLMLAVENEKGMNLNHWDVKQAYTHATLDEGFFSEAPRWVRGQSHKIVKAE 836          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7808.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JUE2_9PHAE3.710e-1234.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JU20_9PHAE4.240e-839.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMY7_9PHAE7.250e-730.70CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7808contigH-canaliculatus_M_contigs7808:4536..4892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7808.1.1mRNA_H-canaliculatus_M_contigs7808.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7808 4536..4892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7808.1.1 ID=prot_H-canaliculatus_M_contigs7808.1.1|Name=mRNA_H-canaliculatus_M_contigs7808.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=119bp
NAFTVLGNLAKGEKADGSRRVRSFERGKDGMIVSTKARLVARVLCLGKVL
IYVKTPAPTPAAASVKIVVAVDNELGCRVRHLDTEHAFTRAELRCPVCTK
LPGGCSDLSGRIPRLEST*
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