prot_H-canaliculatus_M_contigs78052.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs78052.1.1
Unique Nameprot_H-canaliculatus_M_contigs78052.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length59
Homology
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 6.720e-28
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPVLQPYRR +T+ VQTLLQGVHIRED+D LPVAVKRQTTAFPPNFVHSLDSTHMMMT
Sbjct: 1024 GLPVLQPYRRNDTYQVQTLLQGVHIREDSDNLPVAVKRQTTAFPPNFVHSLDSTHMMMT 1082          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: A0A196S9E0_BLAHN (DNA-directed RNA polymerase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9E0_BLAHN)

HSP 1 Score: 91.7 bits (226), Expect = 3.410e-20
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYRR N +H+ T +Q V ++ +ND LPV  +RQ++AFPPNFVHSLDSTHMMMT
Sbjct:  743 GLPVVQPYRRENVYHISTAMQDVQVKVNNDVLPVLTRRQSSAFPPNFVHSLDSTHMMMT 801          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: UPI0007112F92 (DNA-dependent RNA polymerase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007112F92)

HSP 1 Score: 90.5 bits (223), Expect = 8.680e-20
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYR+ N FH+ T +Q V ++ +ND LPV  +RQ++AFPPNFVHSLDSTHMMMT
Sbjct:  744 GLPVVQPYRKENIFHITTAMQDVQVKVNNDILPVMTRRQSSAFPPNFVHSLDSTHMMMT 802          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: D8LUV8_BLAHO (DNA-directed RNA polymerase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LUV8_BLAHO)

HSP 1 Score: 90.1 bits (222), Expect = 1.170e-19
Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYR+ N FH+ T +Q V ++ +ND LPV  ++Q++AFPPNFVHSLDSTHMMMT
Sbjct:  454 GLPVVQPYRKENVFHIATAMQDVQVKVNNDVLPVLTRKQSSAFPPNFVHSLDSTHMMMT 512          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: A0A087SIM1_AUXPR (DNA-directed RNA polymerase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIM1_AUXPR)

HSP 1 Score: 88.2 bits (217), Expect = 5.630e-19
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYRRT   HV+TLLQ + + E+ND+LPV   RQ TAFPPNF+HS+DS+HMMMT
Sbjct:  902 GLPVVQPYRRTTRHHVRTLLQRLVVVENNDELPVMKTRQRTAFPPNFIHSVDSSHMMMT 960          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: A0A059LJP9_9CHLO (DNA-directed RNA polymerase n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LJP9_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 6.940e-18
Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLP++QPYR+++  H++TLLQ + + E+ND LPV   RQ TAFPPN++HS+DSTHMMMT
Sbjct:  179 GLPIVQPYRKSDKQHIRTLLQRLVLVENNDALPVLKMRQRTAFPPNYIHSIDSTHMMMT 237          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: A0A7S2Y0I2_9STRA (DNA-directed RNA polymerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0I2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.010e-17
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYR+ N   VQTL+Q V +  + D LPV+  RQ +AFPPNFVHSLDSTHM+MT
Sbjct:   19 GLPVVQPYRKHNLHVVQTLVQKVMLYREEDNLPVSPIRQRSAFPPNFVHSLDSTHMLMT 77          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: A0A7S3Y5S7_HETAK (DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S7_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 1.210e-17
Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYR+   + VQTL+Q + +   +D LPVA +RQ +AFPPNFVHSLDSTHMMMT
Sbjct:  251 GLPVVQPYRKNTRYVVQTLVQYLQLARSDDALPVAAQRQRSAFPPNFVHSLDSTHMMMT 309          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: A0A4D9D3J6_9STRA (DNA-directed RNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.240e-17
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYRR     V+TL+Q V + + NDKLPV+  RQ +AFPPNFVHSLDSTHM+MT
Sbjct:  965 GLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMT 1023          
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Match: E1ZQB5_CHLVA (DNA-directed RNA polymerase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQB5_CHLVA)

HSP 1 Score: 82.8 bits (203), Expect = 4.390e-17
Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHSLDSTHMMMT 59
            GLPV+QPYRR +  HV+TLLQ + + E+ND LP+  +RQ TAFPPN++HS+DS+HMM+T
Sbjct:  458 GLPVVQPYRRKDRQHVRTLLQRLVLVENNDDLPIMKQRQRTAFPPNYIHSIDSSHMMLT 516          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78052.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU39_9PHAE6.720e-2889.83DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A196S9E0_BLAHN3.410e-2066.10DNA-directed RNA polymerase n=1 Tax=Blastocystis s... [more]
UPI0007112F928.680e-2066.10DNA-dependent RNA polymerase n=1 Tax=Blastocystis ... [more]
D8LUV8_BLAHO1.170e-1964.41DNA-directed RNA polymerase n=1 Tax=Blastocystis h... [more]
A0A087SIM1_AUXPR5.630e-1967.80DNA-directed RNA polymerase n=2 Tax=Auxenochlorell... [more]
A0A059LJP9_9CHLO6.940e-1861.02DNA-directed RNA polymerase n=1 Tax=Helicosporidiu... [more]
A0A7S2Y0I2_9STRA1.010e-1764.41DNA-directed RNA polymerase n=1 Tax=Fibrocapsa jap... [more]
A0A7S3Y5S7_HETAK1.210e-1764.41DNA-directed RNA polymerase n=1 Tax=Heterosigma ak... [more]
A0A4D9D3J6_9STRA3.240e-1766.10DNA-directed RNA polymerase n=2 Tax=Monodopsidacea... [more]
E1ZQB5_CHLVA4.390e-1761.02DNA-directed RNA polymerase n=1 Tax=Chlorella vari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002092DNA-directed RNA polymerase, phage-typePFAMPF00940RNA_polcoord: 1..59
e-value: 1.4E-21
score: 76.9
IPR002092DNA-directed RNA polymerase, phage-typePANTHERPTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 1..59
NoneNo IPR availableGENE3D1.10.150.20coord: 1..49
e-value: 5.0E-11
score: 44.6
NoneNo IPR availablePANTHERPTHR10102:SF0DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 1..59
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs78052contigH-canaliculatus_M_contigs78052:2..504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs78052.1.1mRNA_H-canaliculatus_M_contigs78052.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs78052 2..504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs78052.1.1 ID=prot_H-canaliculatus_M_contigs78052.1.1|Name=mRNA_H-canaliculatus_M_contigs78052.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=59bp
GLPVLQPYRRTNTFHVQTLLQGVHIREDNDKLPVAVKRQTTAFPPNFVHS
LDSTHMMMT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043502DNA/RNA_pol_sf
IPR002092DNA-dir_Rpol_phage-type