mRNA_H-canaliculatus_M_contigs78.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI) HSP 1 Score: 459 bits (1181), Expect = 1.410e-144 Identity = 233/293 (79.52%), Postives = 251/293 (85.67%), Query Frame = 1
Query: 1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
+RVLPVIDLAS+QPD+LGWQLREMNHLVLPHIK VLEAAL ATQGPGDGVAVTLDN+K+M+SRD GE+DLTSSQCVFAQA+RQL +TDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFS D DLL+PCPNGRHAVGQNNEKFVPN QHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRML L + V T ++ A + T MYG+RLFFTYTGSDGVEREL+PGGAARRVTF+NRL FCRMVE+AR HEFDAQ
Sbjct: 6166 ERVLPVIDLASRQPDSLGWQLREMNHLVLPHIKVPVLEAALIATQGPGDGVAVTLDNIKAMVSRDRGERDLTSSQCVFAQAYRQLCDTDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSQDFDLLVPCPNGRHAVGQNNEKFVPNSQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRML--GLHVDFEDLSMVDTIITQFITAIRTCENDGLTTDEEFRGMYGDRLFFTYTGSDGVERELTPGGAARRVTFENRLTFCRMVEQARMHEFDAQ 6456
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C961_9STRA) HSP 1 Score: 294 bits (752), Expect = 2.540e-94 Identity = 156/284 (54.93%), Postives = 202/284 (71.13%), Query Frame = 1
Query: 40 PDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPG-DGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFM---YGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
P T Q+R+ N+L+LPH+K+ VLEAA+ AT+G G + + VTLDN+++ S GE D+ +SQC+FAQAFRQL+ D ++LRTVWDG+RVFQ+NFVGEDGVDAGGVFR+ ++R+ +DLFSP L PCPN RHA G N EK+VP+ +S LAL L FVGRLMG+SLRTRL LPF+LP L+WKR++ L +L + + ++C L +R+ + + DA YG++L FTYTGSDGVEREL PGG R VTF NR AFC +VE R HEFD Q
Sbjct: 7 PRTPPSQVRQANYLILPHVKSRVLEAAMHATRGAGGETLGVTLDNLRAAASLARGETDIAASQCLFAQAFRQLAHRDAQLLRTVWDGDRVFQVNFVGEDGVDAGGVFRDAVTRVTDDLFSPRFALFAPCPNARHATGLNGEKYVPS---ASALALQQLAFVGRLMGISLRTRLALPFELPSLVWKRLI--GLDANLDDLRAIDN-ITCQFLEA--IRTCEHEGIHSDAAFDAQYGDKLVFTYTGSDGVERELIPGGRERTVTFRNRHAFCDLVESRRLHEFDEQ 282
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SX25_9ARCH) HSP 1 Score: 253 bits (647), Expect = 1.040e-76 Identity = 144/305 (47.21%), Postives = 185/305 (60.66%), Query Frame = 1
Query: 1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLE---AALTATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRS-HQCATLWVDAFMYGERLF--------FTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
+ +LP+IDL++ P +LG +R+ N +L +K LE AA AT G +VTLDN K++ S+D GEK+ ++ Q F Q FRQL DP + R + +RVFQINF E GVDAGGVFREG+SR+VEDLFS +LL+ CPNG+ AV +K+VPNP+HS PLAL M FVGRLMG+S+R +LCLPF P LIWK++L V D +A L S +C VD + GE F FTY GSD +EREL GG+ + VTF NRL +C+ V AR EFD Q
Sbjct: 174 ESLLPLIDLSNDDPSSLGAVIRKSNGYLLSQVKMPALEKAIAASAATSGADIPASVTLDNFKALHSKDKGEKEPSTCQNTFVQCFRQLHPKDPSLFRYIISADRVFQINFQNESGVDAGGVFREGVSRIVEDLFSDHFNLLLLCPNGQQAVHSGMDKYVPNPKHSGPLALEMFEFVGRLMGMSIRAKLCLPFDFPPLIWKKIL--------GETVSTLDLGEVDMIAMQQLDSMEKCDEDTVDPVL-GEEAFQERFPNLKFTYMGSDQIERELEVGGSNKLVTFTNRLEYCKAVRTARLSEFDQQ 469
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVM0_HETAK) HSP 1 Score: 249 bits (637), Expect = 2.400e-76 Identity = 132/294 (44.90%), Postives = 179/294 (60.88%), Query Frame = 1
Query: 1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALR-RHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
+R LP +DL ++ P LG +LR H V +K +LE AL T G G G V LD+ K++L++D E+ +SQC+F QAF+QL + P+ LR G RVF + F GE G+DAGGV+RE ++ MVEDL SPD L + CPNG+H V N +K+VP+P H SPLA+ ML FVG+LMG+SLRT+ LPF LP +WK +L + L LA + ++ EG+ ++ A YG+ + +T G DG + EL PGGAAR VT+ RL +CR E R HE D Q
Sbjct: 50 RRALPAVDLRTRTPWRLGARLRRAGHCVFHDLKARLLEEALRETAGAGGGGQVVLDHAKALLAKDREERAPATSQCIFVQAFQQLHDRPPEALRLTEAGGRVFHVQFAGEAGIDAGGVYREAVTEMVEDLHSPDFGLFVLCPNGQHQVAVNTDKYVPSPAHESPLAMQMLEFVGKLMGISLRTKATLPFSLPAFVWKGVLGQPLTLADLAGIDAIAVEFLEALREEGMTQADFDAA-------YGDVVTWTTAGCDGAQVELVPGGAARPVTWATRLEYCRRAERHRLHELDRQ 336
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Hect (e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSE1_9STRA) HSP 1 Score: 258 bits (660), Expect = 1.080e-74 Identity = 146/298 (48.99%), Postives = 192/298 (64.43%), Query Frame = 1
Query: 1 QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPG-DGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPD-LDLLIPCPNGRHAVGQNNEKFVPNPQHSS-PLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVR-ALRRHLAAVVYVSTFLSCDALAEGLLRSHQ-CATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
QR+LP +DLA+ +LG +LR + LVL +K AV+EA T G G + + +TLDN + S ++ E+D+T+S+C+F QAFR L D +VLR+ WDG+RVFQ+ F GE+G DAGGVFREGMSR++EDL+SP+ L+LLIPCPN +H + N +KF+PNPQ ++ PLAL M FVG+LMG+SLR LCLPF P LIWKR+L LR + AV D L LL S + C +G L F TG DG E EL PGG+ VTF R A+C ++ E H+ DAQ
Sbjct: 1165 QRLLPFVDLANPCRHSLGAKLRALAPLVLRDVKMAVVEAGKERTLGSGGNSLTITLDNFAASRSMEAAERDVTTSRCIFVQAFRALHHKDSQVLRSCWDGDRVFQVTFRGENGSDAGGVFREGMSRVLEDLYSPETLNLLIPCPNAQHGLPTNTDKFLPNPQLATCPLALEMFEFVGKLMGMSLRANLCLPFHFPSLIWKRLLGHEVLRSDMEAV---------DTLTSRLLDSVRGCEDEAEFEGKFGGSLTFVATGYDGDEVELIPGGSMEDVTFATRQAYCDLLSERYLHDSDAQ 1453
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MCV0_9STRA) HSP 1 Score: 226 bits (575), Expect = 2.720e-63 Identity = 127/303 (41.91%), Postives = 181/303 (59.74%), Query Frame = 1
Query: 10 LPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG-------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
LP++DL +K P T+ +LR+++H + +K+A++EAA+ AT PG+ +TLD M+++ SRD E + + S+C FAQAFRQL DP +LR D + R+F + F GE+GVD GGV+REG + MV+DLFSP L + CPNG+H G N ++PNP+ +SP+A+ M FVG+L+G+SLRTR PF LP L+WK++L + L R D +A +G+ + AT + G L FT + G E EL+PGG V F NRL +CR+ E AR E AQ
Sbjct: 1458 LPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAVEATNVPGETSGSSQQTARITLDRMQALESRDDREMEPSVSECFFAQAFRQLHAVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFVLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTRGDFPFMLPSLVWKQLLGQTLTRSDLEDTDAMFIQMLDGIANCENDGISTEEEFATAFA-----GLELRFTASSCTGEEIELAPGGRQLTVEFHNRLEYCRLAERARLEECSAQ 1755
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SYJ1_9STRA) HSP 1 Score: 224 bits (572), Expect = 7.420e-63 Identity = 127/303 (41.91%), Postives = 180/303 (59.41%), Query Frame = 1
Query: 10 LPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG-------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
LP++DL +K P T+ +LR+++H + +K+A++EAA+ AT PG+ +TLD M+++ SRD E + + S+C FAQAFRQL DP +LR D + R+F + F GE+GVD GGV+REG + MV+DLFSP L CPNG+H G N ++PNP+ +SP+A+ M FVG+L+G+SLRTR PF LP L+WK++L + L R D +A +G+ + AT + G L FT + G E EL+PGG V F NRL +CR+ E AR E AQ
Sbjct: 4563 LPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAVEATNVPGETSGSSQQTARITLDRMQALESRDDREMEPSVSECFFAQAFRQLHAVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFFLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTRGDFPFMLPSLVWKQLLGQTLTRSDLEDTDAMFIQMLDGIANCENDGISTEEEFATAFA-----GLELRFTASSCTGEEIELAPGGRQLTVEFHNRLEYCRLAERARLEECSAQ 4860
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4G4_9STRA) HSP 1 Score: 207 bits (528), Expect = 8.640e-63 Identity = 117/263 (44.49%), Postives = 159/263 (60.46%), Query Frame = 1
Query: 97 KNAVLEAAL---TATQGPGDGVAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGERVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQH-SSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALAEGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFD 873
K +L+ A+ T T G V LDN KS+ SRD GEKD SSQ F QAF+QL E D V R + +RVFQ +FVGE G+DAGGV+RE MSR+VEDLFS DLL+ CPN + V N +K++PNPQH S L M F+G+LM +S+RT+L LPF+ P ++WK+++ V + F++ DA+A + + W + +L F + GSD VEREL PGG + VT +NR+ +C V AR +EF+
Sbjct: 1 KTPLLDTAVSSTTVTSGKDCPANVILDNAKSLHSRDRGEKDPVSSQNCFVQAFQQLREKDSLVYRCLTSSDRVFQTSFVGESGIDAGGVYREAMSRIVEDLFSEHFDLLLLCPNAQQQVHSNMDKYIPNPQHIGSKLVREMFEFIGKLMAVSVRTKLYLPFEFPPIVWKKLV--------GEDVGLEDFMAMDAIA---CKQVEAVRAWDLETVDPSKLRFEHQGSDKVERELVPGGKNKAVTCENRVDYCDAVVAARLNEFN 252
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2G8_PHYSP) HSP 1 Score: 220 bits (561), Expect = 2.220e-61 Identity = 126/308 (40.91%), Postives = 181/308 (58.77%), Query Frame = 1
Query: 1 QRVLPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG---------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
Q LP++DL +K P T+ +LR+++H + +K+A++EAA+ AT G+ +TLD M+++ SRD E + + S+C FAQAFRQL++ DP +LR D + R+F + F GE+GVD GGV+REG + MV+DLFSP L + CPNG+H G N ++PNP+ +SP+A+ M FVG+L+G+SLRT PF LP L+WK++L + L R D +A +G+ + AT + G L FT + G E EL PGG V F NRL +CR+ E AR E AQ
Sbjct: 5388 QHCLPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAIEATNVAGETSGSSSQQQTARITLDRMQALESRDDREVEPSVSECFFAQAFRQLNQVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFVLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTHGDFPFMLPSLVWKQLLGQPLTRSDLEGTDAMFIQMLDGIANCENDGISTEEEFATAFA-----GLELRFTASSCTGEEIELVPGGRHLTVGFYNRLEYCRLAERARLEECSAQ 5690
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Match: HECT (domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FIH1_9STRA) HSP 1 Score: 219 bits (558), Expect = 4.290e-61 Identity = 125/308 (40.58%), Postives = 180/308 (58.44%), Query Frame = 1
Query: 1 QRVLPVIDLA-SKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDG---------VAVTLDNMKSMLSRDSGEKDLTSSQCVFAQAFRQLSETDPKVLRTVWDGE-RVFQINFVGEDGVDAGGVFREGMSRMVEDLFSPDLDLLIPCPNGRHAVGQNNEKFVPNPQHSSPLALSMLRFVGRLMGLSLRTRLCLPFQLPGLIWKRMLVRALRRHLAAVVYVSTFLSCDALA----EGLLRSHQCATLWVDAFMYGERLFFTYTGSDGVERELSPGGAARRVTFDNRLAFCRMVEEARTHEFDAQ 879
Q LP++DL +K P T+ +LR+++H + +K+A++EAA+ AT G+ +TLD M+++ SRD E + + S+C FAQAFRQL++ DP +LR D + R+F + F GE+GVD GGV+REG + MV+DLFSP L + CPNG+H G N ++PNP+ +SP+A+ M FVG+L+G+SLRT PF L L+WK++L + L R D +A +G+ + AT + G L FT + G E EL PGG V F NRL +CR+ E AR E AQ
Sbjct: 756 QHCLPLLDLRDTKSPWTIAHRLRQLSHCIFFDVKSALVEAAIEATNVVGETSGSSSQQQTARITLDRMQALESRDDREVEPSVSECFFAQAFRQLNQVDPALLRRQIDSKGRLFSVKFRGEEGVDWGGVYREGATSMVDDLFSPHFSLFVLCPNGQHDTGNNRGMYLPNPKCTSPVAMQMFAFVGQLLGISLRTHGDFPFMLASLVWKQLLGQTLTRSDLEGTDAMFIQMLDGIANCEKDGIFTEEEFATAFA-----GLELRFTASSCTGEEIELVPGGRHLTVEFHNRLEYCRLAERARLEECSAQ 1058 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs78.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs78.1.1 >prot_H-canaliculatus_M_contigs78.1.1 ID=prot_H-canaliculatus_M_contigs78.1.1|Name=mRNA_H-canaliculatus_M_contigs78.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=293bp QRVLPVIDLASKQPDTLGWQLREMNHLVLPHIKNAVLEAALTATQGPGDGback to top mRNA from alignment at H-canaliculatus_M_contigs78:4328..7010+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs78.1.1 ID=mRNA_H-canaliculatus_M_contigs78.1.1|Name=mRNA_H-canaliculatus_M_contigs78.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2683bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78:4328..7010+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs78:4328..7010+ >mRNA_H-canaliculatus_M_contigs78.1.1 ID=mRNA_H-canaliculatus_M_contigs78.1.1|Name=mRNA_H-canaliculatus_M_contigs78.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=879bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs78:4328..7010+ (Hapterophycus canaliculatus Oshoro7m male)back to top |