mRNA_H-canaliculatus_M_contigs778.3.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs778.3.1
Unique NamemRNA_H-canaliculatus_M_contigs778.3.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs778.3.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs778contigH-canaliculatus_M_contigs778:7144..7404 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCN7
Model size261
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.58e-10
EggNOG OGs2D2W6@1|root,2SP8K@2759|Eukaryota
Cds size261
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854114.8382158-CDS-H-canaliculatus_M_contigs778:7143..74041696854114.8382158-CDS-H-canaliculatus_M_contigs778:7143..7404Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs778 7144..7404 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs778.3.1prot_H-canaliculatus_M_contigs778.3.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs778 7144..7404 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs778.3.1

>prot_H-canaliculatus_M_contigs778.3.1 ID=prot_H-canaliculatus_M_contigs778.3.1|Name=mRNA_H-canaliculatus_M_contigs778.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=87bp
DQFEDVIYTLDVITIYKGEPEWIETDACKVSFLTAGNGAACGVSLVIGEE
YLIGLSWRSEGYFTANSCGLARAWNKEDMAVLEADGC
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mRNA from alignment at H-canaliculatus_M_contigs778:7144..7404-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs778.3.1 ID=mRNA_H-canaliculatus_M_contigs778.3.1|Name=mRNA_H-canaliculatus_M_contigs778.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=261bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs778:7144..7404- (Hapterophycus canaliculatus Oshoro7m male)
GACCAGTTCGAGGACGTGATCTACACCCTCGATGTCATCACGATCTACAA
GGGAGAGCCCGAGTGGATCGAGACGGATGCTTGTAAGGTCAGCTTTCTCA
CCGCGGGCAACGGCGCCGCTTGCGGGGTTAGCTTGGTGATCGGAGAGGAA
TACCTGATCGGCCTATCGTGGCGCTCGGAAGGATATTTCACGGCCAACTC
GTGCGGGCTGGCGCGGGCGTGGAACAAAGAGGACATGGCTGTGCTTGAAG
CCGATGGCTGC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs778:7144..7404-

>mRNA_H-canaliculatus_M_contigs778.3.1 ID=mRNA_H-canaliculatus_M_contigs778.3.1|Name=mRNA_H-canaliculatus_M_contigs778.3.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=261bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs778:7144..7404- (Hapterophycus canaliculatus Oshoro7m male)
GACCAGTTCGAGGACGTGATCTACACCCTCGATGTCATCACGATCTACAA
GGGAGAGCCCGAGTGGATCGAGACGGATGCTTGTAAGGTCAGCTTTCTCA
CCGCGGGCAACGGCGCCGCTTGCGGGGTTAGCTTGGTGATCGGAGAGGAA
TACCTGATCGGCCTATCGTGGCGCTCGGAAGGATATTTCACGGCCAACTC
GTGCGGGCTGGCGCGGGCGTGGAACAAAGAGGACATGGCTGTGCTTGAAG
CCGATGGCTGC
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