mRNA_H-canaliculatus_M_contigs77585.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs77585.1.1
Unique NamemRNA_H-canaliculatus_M_contigs77585.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF7_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 3.040e-44
Identity = 78/84 (92.86%), Postives = 80/84 (95.24%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            NVVCLRDS TTERRILIVLEFCGGGDLGQFIQ RGPSPEATARHFMLQLAAGL+FLRSRRLIHRDIKPQNLLLS  SSRASLK+
Sbjct:  123 NVVCLRDSRTTERRILIVLEFCGGGDLGQFIQARGPSPEATARHFMLQLAAGLSFLRSRRLIHRDIKPQNLLLSSRSSRASLKI 206          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBL5_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.130e-43
Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQ RGPSPEATARHFMLQLAAGL+FLRSRRLIHRDIKPQNLLLS  SSRASLK+
Sbjct:   92 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQARGPSPEATARHFMLQLAAGLSFLRSRRLIHRDIKPQNLLLSSRSSRASLKI 175          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EV10_CHRCT)

HSP 1 Score: 102 bits (255), Expect = 4.210e-24
Identity = 51/84 (60.71%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            NVV L D  TTER + +V+EFC GGDL +FI+ RG   E  AR F+LQLA GL +LRS  LIHRD+KPQNLLLS  S+ A+LK+
Sbjct:   74 NVVRLHDVQTTERHVYLVMEFCPGGDLSRFIRSRGAQSEPMARGFLLQLAEGLRYLRSHNLIHRDLKPQNLLLSSLSADATLKI 157          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Protein (kinase domain-containing protein n=3 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JKN6_JATCU)

HSP 1 Score: 103 bits (258), Expect = 5.580e-24
Identity = 51/84 (60.71%), Postives = 60/84 (71.43%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            N++CL D      RI IVLE+C GGDL  +IQ+ G  PEATA+HFM QLAAGL  LR   LIHRD+KPQNLLLS + S A LK+
Sbjct:   72 NIICLHDIIEEPGRIHIVLEYCKGGDLSMYIQRHGRVPEATAKHFMQQLAAGLQILRDNNLIHRDLKPQNLLLSTNDSNAVLKI 155          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Protein (kinase domain-containing protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9VBK9_MANES)

HSP 1 Score: 102 bits (253), Expect = 2.650e-23
Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            N++CL D      RI IVLE+C GGDL  +IQ+ G  PEA A+HFM QLAAGL  LR   LIHRD+KPQNLLLS + S A LK+
Sbjct:   72 NIICLHDIIEVPGRIHIVLEYCKGGDLSMYIQRHGRVPEAIAKHFMQQLAAGLQILRDNNLIHRDLKPQNLLLSTNDSNAVLKI 155          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Serine/Threonine (kinase family protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UIQ0_MEDTR)

HSP 1 Score: 98.6 bits (244), Expect = 4.040e-22
Identity = 48/84 (57.14%), Postives = 60/84 (71.43%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            N++ L D      +I +VLE+C GGDL  +IQ+ G  PEATA+HFMLQLAAGL  LR   LIHRD+KPQNLLLS +  +A LK+
Sbjct:   77 NIISLHDIIQAPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKAVLKI 160          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Kinase-like (domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QA07_9CHLO)

HSP 1 Score: 95.9 bits (237), Expect = 4.310e-22
Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            N+VCL D      R+ IVLEFC GGDLG +I++     EATAR+F+ QLA GL  LR   +IHRD+KPQNLLLSD SS   LK+
Sbjct:   70 NIVCLLDLMQDSNRLFIVLEFCAGGDLGHYIKRYRQVSEATARYFLQQLAEGLKELRRHNVIHRDLKPQNLLLSDSSSTPLLKI 153          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: serine/threonine-protein (kinase ATG1c-like isoform X1 n=2 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E3510)

HSP 1 Score: 98.6 bits (244), Expect = 4.340e-22
Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            N++ L D      RI +VLE+C GGDL  +IQ+ G  PEATA+HFM QLAAGL  LR   LIHRD+KPQNLLLS +   + LK+
Sbjct:   69 NIIALHDIIEAPGRIYLVLEYCRGGDLSMYIQRHGSVPEATAKHFMQQLAAGLQVLRENNLIHRDLKPQNLLLSTYDENSVLKI 152          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Protein (kinase domain-containing protein n=4 Tax=Populus TaxID=3689 RepID=B9HC64_POPTR)

HSP 1 Score: 98.6 bits (244), Expect = 4.350e-22
Identity = 49/84 (58.33%), Postives = 58/84 (69.05%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            N++ L D      RILIVLE+C GGDL  +IQ+ G  PEA A+HFM QLAAGL  LR   LIHRD+KPQNLLLS   + A LK+
Sbjct:   73 NIIRLHDIIKVPGRILIVLEYCEGGDLSMYIQRHGKVPEAIAKHFMQQLAAGLQILRDNNLIHRDLKPQNLLLSTSDNNAVLKI 156          
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Match: Serine/Threonine (kinase family protein n=2 Tax=Trifolieae TaxID=163742 RepID=A0A072UGS9_MEDTR)

HSP 1 Score: 98.6 bits (244), Expect = 4.360e-22
Identity = 48/84 (57.14%), Postives = 60/84 (71.43%), Query Frame = 1
Query:    4 NVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQLAAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKV 255
            N++ L D      +I +VLE+C GGDL  +IQ+ G  PEATA+HFMLQLAAGL  LR   LIHRD+KPQNLLLS +  +A LK+
Sbjct:   77 NIISLHDIIQAPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKAVLKI 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77585.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein3.040e-4492.86kinase domain-containing protein (Fragment) n=1 Ta... [more]
Protein1.130e-4394.05kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Hypothetical4.210e-2460.71protein (Fragment) n=1 Tax=Chrysotila carterae Tax... [more]
Protein5.580e-2460.71kinase domain-containing protein n=3 Tax=Jatropha ... [more]
Protein2.650e-2359.52kinase domain-containing protein n=4 Tax=Crotonoid... [more]
Serine/Threonine4.040e-2257.14kinase family protein n=1 Tax=Medicago truncatula ... [more]
Kinase-like4.310e-2257.14domain-containing protein n=1 Tax=Scenedesmus sp. ... [more]
serine/threonine-protein4.340e-2255.95kinase ATG1c-like isoform X1 n=2 Tax=Asparagus off... [more]
Protein4.350e-2258.33kinase domain-containing protein n=4 Tax=Populus T... [more]
Serine/Threonine4.360e-2257.14kinase family protein n=2 Tax=Trifolieae TaxID=163... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs77585contigH-canaliculatus_M_contigs77585:83..349 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LHF7
PFAMsDUF3543,Pkinase
Model size267
Max annot lvl2759|Eukaryota
KEGG koko:K08269,ko:K21358
KEGG Pathwayko04136,ko04138,ko04139,ko04140,ko04150,ko04212,map04136,map04138,map04139,map04140,map04150,map04212
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.98e-45
EggNOG OGsKOG0595@1|root,KOG0595@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size267
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854113.0599687-CDS-H-canaliculatus_M_contigs77585:82..3491696854113.0599687-CDS-H-canaliculatus_M_contigs77585:82..349Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs77585 83..349 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs77585.1.1prot_H-canaliculatus_M_contigs77585.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs77585 83..349 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs77585.1.1

>prot_H-canaliculatus_M_contigs77585.1.1 ID=prot_H-canaliculatus_M_contigs77585.1.1|Name=mRNA_H-canaliculatus_M_contigs77585.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=89bp
ANVVCLRDSHTTERRILIVLEFCGGGDLGQFIQKRGPSPEATARHFMLQL
AAGLAFLRSRRLIHRDIKPQNLLLSDHSSRASLKVRLC*
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mRNA from alignment at H-canaliculatus_M_contigs77585:83..349-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs77585.1.1 ID=mRNA_H-canaliculatus_M_contigs77585.1.1|Name=mRNA_H-canaliculatus_M_contigs77585.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=267bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77585:83..349- (Hapterophycus canaliculatus Oshoro7m male)
GCGAACGTGGTCTGCTTGCGCGATAGTCACACCACAGAGCGGAGGATCCT GATCGTGCTAGAGTTCTGCGGGGGCGGCGACCTGGGGCAGTTCATCCAGA AGAGAGGGCCGTCCCCGGAGGCTACGGCGCGGCACTTCATGCTGCAGCTG GCGGCCGGGCTCGCGTTCCTCCGCTCTCGGCGGCTCATCCACCGGGACAT TAAGCCGCAGAACCTGCTGCTCAGCGACCACTCGTCGCGCGCCTCGTTGA AGGTGAGGTTGTGTTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77585:83..349-

>mRNA_H-canaliculatus_M_contigs77585.1.1 ID=mRNA_H-canaliculatus_M_contigs77585.1.1|Name=mRNA_H-canaliculatus_M_contigs77585.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=267bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77585:83..349- (Hapterophycus canaliculatus Oshoro7m male)
GCGAACGTGGTCTGCTTGCGCGATAGTCACACCACAGAGCGGAGGATCCT
GATCGTGCTAGAGTTCTGCGGGGGCGGCGACCTGGGGCAGTTCATCCAGA
AGAGAGGGCCGTCCCCGGAGGCTACGGCGCGGCACTTCATGCTGCAGCTG
GCGGCCGGGCTCGCGTTCCTCCGCTCTCGGCGGCTCATCCACCGGGACAT
TAAGCCGCAGAACCTGCTGCTCAGCGACCACTCGTCGCGCGCCTCGTTGA
AGGTGAGGTTGTGTTAG
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