mRNA_H-canaliculatus_M_contigs77572.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs77572.1.1
Unique NamemRNA_H-canaliculatus_M_contigs77572.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: DUF4470 (domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.650e-18
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 1
Query:   13 RFDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTDLRRSGPTDKKTRLARTKDFES 189
            RFDLIDSSYL++ LG+LNVVMA SPLLKPSPHAV+RTDLRRSGP  K  RL R KD E+
Sbjct:  504 RFDLIDSSYLANNLGILNVVMATSPLLKPSPHAVVRTDLRRSGPARK--RLTRAKDVEA 560          
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: MYND-type (zinc finger protein samB n=1 Tax=Diaporthe ampelina TaxID=1214573 RepID=A0A0G2FEC9_9PEZI)

HSP 1 Score: 51.6 bits (122), Expect = 5.840e-6
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 1
Query:   13 RFDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTDLRRSGPTDKKTRLARTKDFESLC 195
            +FD++D+S LSDTLG+LN++++ SPLLK +P A + T+       D+KT     K  E LC
Sbjct:  351 QFDIVDTSTLSDTLGILNILVSGSPLLKAAPWATLYTET-----MDEKTEGKEAKFDEILC 406          
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: MYND-type (zinc finger protein samB n=1 Tax=Magnaporthiopsis poae (strain ATCC 64411 / 73-15) TaxID=644358 RepID=A0A0C4DWY8_MAGP6)

HSP 1 Score: 51.6 bits (122), Expect = 5.860e-6
Identity = 25/61 (40.98%), Postives = 40/61 (65.57%), Query Frame = 1
Query:   16 FDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTDLRRSGPTDKKTRLARTKDFESLCI 198
            FD ID+S L+D+LG LN++ +A PLLKP+P A + T++  S  TD++   A+     +L +
Sbjct:  379 FDAIDTSNLADSLGALNILFSAGPLLKPAPWAALSTEMLTSPATDEREAFAKLLPGGTLAV 439          
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: MYND-type (zinc finger protein samB n=1 Tax=Microdochium bolleyi TaxID=196109 RepID=A0A136IZC0_9PEZI)

HSP 1 Score: 50.8 bits (120), Expect = 1.090e-5
Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 1
Query:    1 APCDRFDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTDLRRSGP 144
            +P  RFD+ID++ L+D  G LNV++AA PLL+PSP +V+ T+  R  P
Sbjct:  362 SPATRFDIIDTTSLADEHGFLNVLVAARPLLRPSPVSVVYTEALRRSP 409          
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1ISJ4_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 5.170e-5
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 1
Query:   16 FDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTD 126
            FD+ID+S L+D LG+LN+++A  PLLKP  HA++ TD
Sbjct:  374 FDVIDTSNLTDHLGLLNILVATGPLLKPVLHAILHTD 410          
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RZW4_9APHY)

HSP 1 Score: 48.9 bits (115), Expect = 5.260e-5
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query:   13 RFDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTDLRRSGPTDKKTRLARTKDFESLCI 198
            RFD+ID+S LSD +G+LN+++AA+PLL  SP +V+ T+   +   D  T L  +K F SL I
Sbjct:  367 RFDVIDTSNLSDHIGMLNMLLAAAPLLAGSPSSVLYTETLLTHADDPSTELE-SKLFASLPI 427          
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W8E5_9FUNG)

HSP 1 Score: 48.1 bits (113), Expect = 9.620e-5
Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 1
Query:   13 RFDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRT---DLRRSGPT 147
            +FD+I+S+ L DT+G+LNV+ A +PLLKP+P +V+ T   DL + G T
Sbjct:  303 KFDVIESANLVDTIGLLNVLSATAPLLKPAPRSVINTASRDLLKRGVT 350          
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Match: MYND-type (zinc finger protein samB n=1 Tax=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) TaxID=554155 RepID=C5FXD7_ARTOC)

HSP 1 Score: 48.1 bits (113), Expect = 9.840e-5
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 1
Query:   16 FDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTDL 129
            FDLID+S L D LG LNV+ AASPLLKP P + + T+L
Sbjct:  369 FDLIDTSNLVDHLGALNVLTAASPLLKPKPTSTICTEL 406          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77572.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
DUF44702.650e-1876.27domain-containing protein (Fragment) n=2 Tax=Ectoc... [more]
MYND-type5.840e-644.26zinc finger protein samB n=1 Tax=Diaporthe ampelin... [more]
MYND-type5.860e-640.98zinc finger protein samB n=1 Tax=Magnaporthiopsis ... [more]
MYND-type1.090e-550.00zinc finger protein samB n=1 Tax=Microdochium boll... [more]
Uncharacterized5.170e-556.76protein n=1 Tax=Blyttiomyces helicus TaxID=388810 ... [more]
MYND-type5.260e-546.77domain-containing protein n=1 Tax=Ganoderma sinens... [more]
Uncharacterized9.620e-550.00protein n=1 Tax=Blyttiomyces helicus TaxID=388810 ... [more]
MYND-type9.840e-563.16zinc finger protein samB n=1 Tax=Arthroderma otae ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs77572contigH-canaliculatus_M_contigs77572:284..481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog148304.MAPG_04523T0
PFAMsDUF4470,zf-MYND
Model size198
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.6e-07
EggNOG OGs2BWBX@1|root,2SE9H@2759|Eukaryota,39W4I@33154|Opisthokonta,3P092@4751|Fungi,3QK9K@4890|Ascomycota,2115D@147550|Sordariomycetes,41IS3@639021|Magnaporthales
DescriptionDomain of unknown function (DUF4470)
Cds size198
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854113.023787-CDS-H-canaliculatus_M_contigs77572:283..4811696854113.023787-CDS-H-canaliculatus_M_contigs77572:283..481Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs77572 284..481 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs77572.1.1prot_H-canaliculatus_M_contigs77572.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs77572 284..481 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs77572.1.1

>prot_H-canaliculatus_M_contigs77572.1.1 ID=prot_H-canaliculatus_M_contigs77572.1.1|Name=mRNA_H-canaliculatus_M_contigs77572.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=66bp
APCDRFDLIDSSYLSDTLGVLNVVMAASPLLKPSPHAVMRTDLRRSGPTD
KKTRLARTKDFESLCI
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mRNA from alignment at H-canaliculatus_M_contigs77572:284..481-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs77572.1.1 ID=mRNA_H-canaliculatus_M_contigs77572.1.1|Name=mRNA_H-canaliculatus_M_contigs77572.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=198bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77572:284..481- (Hapterophycus canaliculatus Oshoro7m male)
GCCCCCTGCGACAGGTTTGATTTGATCGACTCGTCGTACCTGTCCGACAC CCTCGGCGTTCTGAACGTGGTCATGGCAGCGTCGCCGCTGCTCAAGCCAT CGCCACATGCCGTGATGCGCACGGACCTGAGGAGGAGCGGCCCGACCGAC AAGAAAACGCGCCTGGCGCGCACGAAGGATTTTGAGTCCCTTTGTATC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77572:284..481-

>mRNA_H-canaliculatus_M_contigs77572.1.1 ID=mRNA_H-canaliculatus_M_contigs77572.1.1|Name=mRNA_H-canaliculatus_M_contigs77572.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=198bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77572:284..481- (Hapterophycus canaliculatus Oshoro7m male)
GCCCCCTGCGACAGGTTTGATTTGATCGACTCGTCGTACCTGTCCGACAC
CCTCGGCGTTCTGAACGTGGTCATGGCAGCGTCGCCGCTGCTCAAGCCAT
CGCCACATGCCGTGATGCGCACGGACCTGAGGAGGAGCGGCCCGACCGAC
AAGAAAACGCGCCTGGCGCGCACGAAGGATTTTGAGTCCCTTTGTATC
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