mRNA_H-canaliculatus_M_contigs77565.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs77565.1.1
Unique NamemRNA_H-canaliculatus_M_contigs77565.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: PFK (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8I7_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.390e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 1 
Query:   28 QGLNISVTGIPKTIDNDLDIIDRSFGFLTAVE 123
            +GLNISVTGIPKTIDNDLDIIDRSFGFLTAVE
Sbjct:  194 RGLNISVTGIPKTIDNDLDIIDRSFGFLTAVE 225
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: OSJNBa0016O02.24 (protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7FB09_ORYSJ)

HSP 1 Score: 63.2 bits (152), Expect = 1.700e-10
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            V+ F  F  +GLNIS+TGIPKT+DND+ IIDRSFGF TAVE+
Sbjct:  177 VAIFNEFKRRGLNISITGIPKTVDNDIGIIDRSFGFQTAVEI 218
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: ATP-dependent (6-phosphofructokinase n=8 Tax=Oryzinae TaxID=1648021 RepID=A0A0E0H1Y2_ORYNI)

HSP 1 Score: 63.2 bits (152), Expect = 1.710e-10
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            V+ F  F  +GLNIS+TGIPKT+DND+ IIDRSFGF TAVE+
Sbjct:  216 VAIFNEFKRRGLNISITGIPKTVDNDIGIIDRSFGFQTAVEI 257
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: PFK (domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5THC7_ZIZPA)

HSP 1 Score: 63.2 bits (152), Expect = 1.710e-10
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            V+ F  F  +GLNIS+TGIPKT+DND+ IIDRSFGF TAVE+
Sbjct:  209 VAIFEEFKRRGLNISITGIPKTVDNDIGIIDRSFGFQTAVEI 250
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: Os04g0469500 (protein (Fragment) n=3 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q0JCH8_ORYSJ)

HSP 1 Score: 63.2 bits (152), Expect = 1.710e-10
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            V+ F  F  +GLNIS+TGIPKT+DND+ IIDRSFGF TAVE+
Sbjct:  226 VAIFNEFKRRGLNISITGIPKTVDNDIGIIDRSFGFQTAVEI 267
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: ATP-dependent (6-phosphofructokinase n=25 Tax=Poaceae TaxID=4479 RepID=B4FAW1_MAIZE)

HSP 1 Score: 62.4 bits (150), Expect = 3.190e-10
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            ++ F  F  +GLNIS+TGIPKT+DND+ IIDRSFGF TAVEV
Sbjct:  216 LAIFEEFKRRGLNISITGIPKTVDNDIGIIDRSFGFQTAVEV 257
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: 6-phosphofructokinase (2 n=3 Tax=Poaceae TaxID=4479 RepID=M8BSU8_AEGTA)

HSP 1 Score: 60.8 bits (146), Expect = 9.620e-10
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            V+ F  F  +GL IS+TGIPKT+DND+ IIDRSFGF TAVE+
Sbjct:   51 VAIFEEFKRRGLRISITGIPKTVDNDIGIIDRSFGFQTAVEI 92
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BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: 6-phosphofructokinase (2 n=1 Tax=Triticum urartu TaxID=4572 RepID=M7Z149_TRIUA)

HSP 1 Score: 60.8 bits (146), Expect = 1.120e-9
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            V+ F  F  +GL IS+TGIPKT+DND+ IIDRSFGF TAVE+
Sbjct:  204 VAIFEEFKRRGLRISITGIPKTVDNDIGIIDRSFGFQTAVEI 245
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: ATP-dependent (6-phosphofructokinase n=12 Tax=Pooideae TaxID=147368 RepID=A0A3B6B181_WHEAT)

HSP 1 Score: 60.8 bits (146), Expect = 1.120e-9
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    1 VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            V+ F  F  +GL IS+TGIPKT+DND+ IIDRSFGF TAVE+
Sbjct:  210 VAIFEEFKRRGLRISITGIPKTVDNDIGIIDRSFGFQTAVEI 251
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Match: ATP-dependent (6-phosphofructokinase n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5C1E3_AQUCA)

HSP 1 Score: 60.1 bits (144), Expect = 2.090e-9
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 1 
Query:   28 QGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV 126
            + LNISVTGIPKT+DND+ IIDRSFGF+TAVEV
Sbjct:  212 RKLNISVTGIPKTVDNDIGIIDRSFGFITAVEV 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77565.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PFK1.390e-1196.88domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
OSJNBa0016O02.241.700e-1069.05protein n=1 Tax=Oryza sativa subsp. japonica TaxID... [more]
ATP-dependent1.710e-1069.056-phosphofructokinase n=8 Tax=Oryzinae TaxID=16480... [more]
PFK1.710e-1069.05domain-containing protein n=1 Tax=Zizania palustri... [more]
Os04g04695001.710e-1069.05protein (Fragment) n=3 Tax=Oryza sativa subsp. jap... [more]
ATP-dependent3.190e-1069.056-phosphofructokinase n=25 Tax=Poaceae TaxID=4479 ... [more]
6-phosphofructokinase9.620e-1066.672 n=3 Tax=Poaceae TaxID=4479 RepID=M8BSU8_AEGTA[more]
6-phosphofructokinase1.120e-966.672 n=1 Tax=Triticum urartu TaxID=4572 RepID=M7Z149_... [more]
ATP-dependent1.120e-966.676-phosphofructokinase n=12 Tax=Pooideae TaxID=1473... [more]
ATP-dependent2.090e-981.826-phosphofructokinase n=1 Tax=Aquilegia coerulea T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs77565contigH-canaliculatus_M_contigs77565:226..351 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FRM0
Preferred namepfk
PFAMsPFK
Model size126
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00850,ko:K01412
KEGG ReactionR00756,R03236,R03237,R03238,R03239,R04779
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230
KEGG ModuleM00001,M00345
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003872,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009536,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0020015,GO:0022622,GO:0030154,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042579,GO:0042866,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0097159,GO:0097367,GO:0099402,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1905392
Exons1
Evalue2.3e-12
EggNOG OGsCOG0205@1|root,KOG2440@2759|Eukaryota
EC2.7.1.11,3.4.24.64
Description6-phosphofructokinase activity
Cds size126
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01009,ko03019,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854112.8312957-CDS-H-canaliculatus_M_contigs77565:225..3511696854112.8312957-CDS-H-canaliculatus_M_contigs77565:225..351Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs77565 226..351 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs77565.1.1prot_H-canaliculatus_M_contigs77565.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs77565 226..351 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs77565.1.1

>prot_H-canaliculatus_M_contigs77565.1.1 ID=prot_H-canaliculatus_M_contigs77565.1.1|Name=mRNA_H-canaliculatus_M_contigs77565.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=42bp
VSFFLPFFLQGLNISVTGIPKTIDNDLDIIDRSFGFLTAVEV
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mRNA from alignment at H-canaliculatus_M_contigs77565:226..351+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs77565.1.1 ID=mRNA_H-canaliculatus_M_contigs77565.1.1|Name=mRNA_H-canaliculatus_M_contigs77565.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=126bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77565:226..351+ (Hapterophycus canaliculatus Oshoro7m male)
GTCTCTTTTTTTCTTCCTTTCTTTCTTCAGGGGCTGAACATTTCTGTGAC
GGGTATCCCCAAGACCATCGACAACGACCTGGACATCATCGACCGCTCGT
TCGGATTCCTCACGGCTGTGGAGGTA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77565:226..351+

>mRNA_H-canaliculatus_M_contigs77565.1.1 ID=mRNA_H-canaliculatus_M_contigs77565.1.1|Name=mRNA_H-canaliculatus_M_contigs77565.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=126bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77565:226..351+ (Hapterophycus canaliculatus Oshoro7m male)
GTCTCTTTTTTTCTTCCTTTCTTTCTTCAGGGGCTGAACATTTCTGTGAC
GGGTATCCCCAAGACCATCGACAACGACCTGGACATCATCGACCGCTCGT
TCGGATTCCTCACGGCTGTGGAGGTA
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