mRNA_H-canaliculatus_M_contigs7755.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY7_ECTSI) HSP 1 Score: 303 bits (777), Expect = 5.620e-100 Identity = 147/178 (82.58%), Postives = 161/178 (90.45%), Query Frame = 1
Query: 1 PPWLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
P WL V TF HEVWLLLQHANILLNPLCQRLDRSYG+ LLRRRLYWVIAGVLAAYW+RE++SMLIASPYASPLTLKMV ISS+YHVGKI+LISLDA+R+WSPT+GIMRLLMDHWHMSS KD LLC+KRMSLQ FDT THALIVRDMVRWDEESAER L+ +VVS+VW +HAIAN
Sbjct: 161 PAWLVVATFAHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDVLLCLKRMSLQGFDTATHALIVRDMVRWDEESAERTHGLHRKLIVVSVVWAMHAIAN 338
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB7_9PHAE) HSP 1 Score: 298 bits (763), Expect = 9.950e-98 Identity = 144/178 (80.90%), Postives = 160/178 (89.89%), Query Frame = 1
Query: 1 PPWLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
P WL V TFVHEVWLLLQHANILLNPLCQRLDRSYGV LLRRRLYWVIAGVL+AYW+RE++SMLIASPYASPLTLKMV SS+YHVGKI+LIS DA+R+WSPT+GIMRLLMDHWHMSS KD LLC+KRMSLQ FDT THALIVRDMVRWDEESA R L++ ++VS+VW +HAIAN
Sbjct: 161 PAWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGVGLLRRRLYWVIAGVLSAYWSREVLSMLIASPYASPLTLKMVATSSLYHVGKIILISRDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHQKLIIVSVVWAMHAIAN 338
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6P6_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.230e-67 Identity = 105/182 (57.69%), Postives = 134/182 (73.63%), Query Frame = 1
Query: 10 LAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQA-------FDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
L VHEVW++LQH N+LLNPLCQRLDR YG++LL++R YWVIAGVL AYW REI+SML A PY +PLT M+ +S VYH+GKI+L+S+DA+R WSPTLGIMRLL+DHWH+ SL D ++ KR +LQA FD++TH LIVRD+V + +L V+ SLVW +HA+AN
Sbjct: 40 LVALLLVHEVWVMLQHLNVLLNPLCQRLDRGYGISLLKKRQYWVIAGVLGAYWLREILSMLAALPYTAPLTSNMIAVSCVYHLGKIILVSIDAQRGWSPTLGIMRLLIDHWHLRSLADLMISAKRFALQARQLSHCAFDSLTHVLIVRDLVSGRMTRSVASAELERLVVITSLVWALHALAN 221
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KNY6_GUITH) HSP 1 Score: 191 bits (486), Expect = 4.570e-56 Identity = 93/169 (55.03%), Postives = 122/169 (72.19%), Query Frame = 1
Query: 25 FVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIA 531
F HEVW+ +QHAN+LLNP QRLDR YG+ALLR+R YWVIAGVL+AYWARE++SM++ Y S T M+++S +YH+ KI L+SLDA R++SP LGIM LL+D WH+ SL D L+ +KR+ LQ FDT TH IV DM+ D+E L V ++ VW +HA+A
Sbjct: 108 FAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKICLVSLDAARKFSPRLGIMSLLIDQWHLDSLVDALITLKRVLLQGFDTATHCKIVLDMISKDKE-------LLSFAVFIAAVWFVHALA 269
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: CER3 (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V2L4_9DINO) HSP 1 Score: 175 bits (443), Expect = 1.940e-47 Identity = 90/172 (52.33%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 25 FVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEE--SAERKLDLYETFVVVSLVWVIHAIAN 534
F+HE W++LQHAN+LLNP CQRLDR YGV++LR+ +WVIAGVL YW+RE++SML+ + SP T ++ SS YH+ K+ I DA+RQWSP+LGIMRLL+DHWH +L L+ R LQ DT+TH +IVRDM+ +A R L L+ F L+WV+HA N
Sbjct: 331 FLHEAWVMLQHANVLLNPFCQRLDRRYGVSMLRKGQHWVIAGVLVMYWSREVVSMLLCLAFTSPRTQLAILASSGYHLVKMHSICWDAQRQWSPSLGIMRLLIDHWHFDTLAQRLVSALRFFLQGSDTLTHIMIVRDMLTRSGSPITAGRLLPLHGLF----LLWVVHAALN 498
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812Q1W1_9DINO) HSP 1 Score: 163 bits (412), Expect = 8.370e-45 Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 10 LAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
LA +HE W+ LQH N+LLNP CQRLDR+YG+++L++ +WVIA VL YWARE+ SML+ PY S + V +S++YH K+ I LDA R WSPTLGIM+LL+DHWH +L L+ + R LQ +DT+ H IV D++ L+ F LVW++HA+ N
Sbjct: 53 LAALLLLHEAWVTLQHGNVLLNPFCQRLDRNYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFHTLGTQLVSLLRFVLQGYDTMVHVFIVSDLIHHGGLGTGYVWWLHVLF----LVWLLHAVLN 223
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812Z067_9DINO) HSP 1 Score: 160 bits (404), Expect = 4.680e-43 Identity = 79/169 (46.75%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 28 VHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
+HE W+ LQH N+LLNP CQRLDR YG+++L++ +WVIA VL YWARE+ SML+ PY + + V +S++YH K+ I LDA R WSPTLGIM+LL+DHWH +L L+ + R LQ +DT+ H IV D++ L+ F LVW++HA+ N
Sbjct: 61 LHEAWVTLQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYITVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFYTLGTQLVSLLRFLLQGYDTMVHVFIVSDLIHHGGLGTSYVWWLHVLF----LVWLLHAVLN 225
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Caroteno-chlorophyll (a-c-binding protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D0R3_SYMMI) HSP 1 Score: 162 bits (409), Expect = 7.010e-43 Identity = 81/175 (46.29%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 10 LAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
LA +HE W+ +QH N+LLNP CQRLDR YG+++L++ +WVIA VL YWARE+ SML+ PY S + V +S++YH K+ I LDA R WSPTLGIM+LL+DHWH +L L+ + R LQ +DT+ H IV D++ L+ F LVW++HA+ N
Sbjct: 53 LAALLLLHEAWVTMQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFHTLGTQLVSLLRFVLQGYDTMVHVFIVSDLIHHGGLGTGYVWWLHVLF----LVWLLHAVLN 223
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC) HSP 1 Score: 143 bits (361), Expect = 2.250e-36 Identity = 80/177 (45.20%), Postives = 108/177 (61.02%), Query Frame = 1
Query: 25 FVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILL-ISLDAKRQWSPTLGIMRLLMDHWHMSSLK-------DTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIA 531
F HEVW+ +QHAN+LLNP QRLDR YG+ALLR+R YWVIAGVL+AYWARE++SM++ Y S T M+++S +YH+ K++ D LGIM LL+D WH+ SL D L+ +KR+ LQ IV DM+ D+E L V ++ VW +HA+A
Sbjct: 100 FAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKVIKSFDSDEFNDTLQRLGIMSLLIDQWHLDSLVVIHSLDVDALITLKRVLLQ---------IVLDMISKDKE-------LLSFAVFIAAVWFVHALA 260
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TV35_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.070e-35 Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 1
Query: 7 WLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGVLAAYWAREIISMLIASPYASPLTLKMVVISSVYHVGKILLISLDAKRQWSPTLGIMRLLMDHWHMSSLKDTLLCIKRMSLQAFDTVTHALIVRDMVRWDEESAERKLDLYETFVVVSLVWVIHAIAN 534
WLA HE W+ LQH+N+L NPLCQ LDR YG+ALLR +W IAG L+AYW RE + M + +P+ T +V+ S VYH K + LDA R++SP GIMR+++D +H+ + + +L R+ LQ DT HA+I++ + + ++E + + +S +W+ HA N
Sbjct: 62 WLATLLLAHEYWVYLQHSNVLANPLCQHLDRQYGIALLRSNQHWAIAGTLSAYWCRESMCMFLCTPFLPRHTQYLVLYSLVYHTIKSRGVRLDAIRRYSPQFGIMRIVIDKFHLHTTAEAILTAVRLLLQGGDTFIHAMIIKGLFVYLSSTSE--MSMLPMIHWLSFIWITHAAMN 235 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7755.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7755.1.1 >prot_H-canaliculatus_M_contigs7755.1.1 ID=prot_H-canaliculatus_M_contigs7755.1.1|Name=mRNA_H-canaliculatus_M_contigs7755.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=178bp PPWLAVTTFVHEVWLLLQHANILLNPLCQRLDRSYGVALLRRRLYWVIAGback to top mRNA from alignment at H-canaliculatus_M_contigs7755:2430..3941- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7755.1.1 ID=mRNA_H-canaliculatus_M_contigs7755.1.1|Name=mRNA_H-canaliculatus_M_contigs7755.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1512bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7755:2430..3941- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7755:2430..3941- >mRNA_H-canaliculatus_M_contigs7755.1.1 ID=mRNA_H-canaliculatus_M_contigs7755.1.1|Name=mRNA_H-canaliculatus_M_contigs7755.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=534bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7755:2430..3941- (Hapterophycus canaliculatus Oshoro7m male)back to top |