mRNA_H-canaliculatus_M_contigs77502.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs77502.1.1
Unique NamemRNA_H-canaliculatus_M_contigs77502.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0VYM6_9ZZZZ)

HSP 1 Score: 227 bits (579), Expect = 5.100e-73
Identity = 102/130 (78.46%), Postives = 114/130 (87.69%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            SLGPI+TVDDTMKAK+ KK  KR IWAPEVHWLADK  WALVHCPK+HSSLALTSG++LQGPWTHPM G MGQRHDPSIF DDDG R+LLW NT +APL+D LT YTA+PVRIDP+GSRPGP+ +PIS I
Sbjct:   45 SLGPIYTVDDTMKAKSGKKIAKRLIWAPEVHWLADKGCWALVHCPKKHSSLALTSGSELQGPWTHPMAGNMGQRHDPSIFTDDDGTRYLLWDNTFIAPLNDSLTGYTAEPVRIDPAGSRPGPDDKPISHI 174          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Beta-xylosidase (n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8KMZ2_9PLAN)

HSP 1 Score: 228 bits (581), Expect = 5.120e-72
Identity = 104/130 (80.00%), Postives = 116/130 (89.23%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            S+GPIFTVDDTMKAK+ KK VKR IWAPEVHWLAD   WA+VHCPK+HSSLALT+GA+LQGPWTHPM G MGQRHDPSI  DDDGKR+LLW  T VAPLSDDLT+YTA+PVRIDP+GSRPGP+G+PIS I
Sbjct:   84 SMGPIFTVDDTMKAKSGKKIVKRLIWAPEVHWLADIGCWAMVHCPKKHSSLALTNGAELQGPWTHPMAGNMGQRHDPSIXTDDDGKRYLLWEXTFVAPLSDDLTSYTAEPVRIDPAGSRPGPDGKPISYI 213          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Beta-xylosidase (n=3 Tax=PVC group TaxID=1783257 RepID=A0A349VJF1_9PLAN)

HSP 1 Score: 230 bits (586), Expect = 1.200e-71
Identity = 103/130 (79.23%), Postives = 116/130 (89.23%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            S+GPIFTVDDTMKAK+ KK  KR IWAPEVHWLADK  WALVHCPK+HSSLALTSGA+LQGPWTHPM G MGQRHDPSIF DDDG R++LWGNT VAPL++DLT Y ++PVRIDP+GSRPGP+G+PIS I
Sbjct:  191 SMGPIFTVDDTMKAKSGKKISKRLIWAPEVHWLADKGCWALVHCPKKHSSLALTSGAELQGPWTHPMAGNMGQRHDPSIFTDDDGTRYMLWGNTFVAPLNNDLTGYISEPVRIDPAGSRPGPDGKPISHI 320          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Glycoside (hydrolase family 2 sugar binding protein n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5U6H5_9BACT)

HSP 1 Score: 229 bits (585), Expect = 2.560e-67
Identity = 104/130 (80.00%), Postives = 113/130 (86.92%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            SLGPIFTVDDTMKAK+ KK  KR IWAPEVHWLADK RWALVHCP  HSSLA T G +L+ PWTHPM+G MG+RHDPSIF DDDGKR+LLW NT +APLSDDLT YTA PVRIDP+GSRPGP+GEPISRI
Sbjct:  870 SLGPIFTVDDTMKAKSGKKIPKRLIWAPEVHWLADKGRWALVHCPGMHSSLAFTEGKELRAPWTHPMNGAMGKRHDPSIFTDDDGKRYLLWANTSIAPLSDDLTGYTAKPVRIDPAGSRPGPDGEPISRI 999          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: family (43 glycosylhydrolase n=2 Tax=unclassified Rhodopirellula TaxID=2624920 RepID=UPI001E63D9DE)

HSP 1 Score: 202 bits (513), Expect = 7.140e-62
Identity = 91/130 (70.00%), Postives = 106/130 (81.54%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            SLGP+F V DTMKA++ KK  K  IWAPE+HWL D  RWALVHCPKQHSSLAL+ G+DL+GPWTHPM G++G RHDPSIF DDDG R+LLW NTLVA L+ DL+ Y   PVRIDP+G+RPGPNG  I+RI
Sbjct:   84 SLGPVFQVSDTMKARSGKKIGKPLIWAPELHWLGD--RWALVHCPKQHSSLALSEGSDLKGPWTHPMQGKLGPRHDPSIFTDDDGSRYLLWSNTLVAKLASDLSGYETQPVRIDPAGTRPGPNGTSIARI 211          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Choline-sulfatase (n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZAM0_9PLAN)

HSP 1 Score: 212 bits (539), Expect = 2.480e-61
Identity = 92/130 (70.77%), Postives = 116/130 (89.23%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            +LG +FTV+DTMKA++ ++  +R IWAPEVHWL D  RWA++HCP++HSSLAL++G +L+GPWTHPM G+MGQRHDPS+F DDDG R+LLWGNT VAPLSDDL+ YTA+PVRIDP+GSRPGP+G+PISRI
Sbjct:  760 NLGAVFTVEDTMKARSGQEINRRLIWAPEVHWLGD--RWAVLHCPRRHSSLALSAGRELKGPWTHPMQGKMGQRHDPSLFTDDDGTRYLLWGNTFVAPLSDDLSRYTAEPVRIDPAGSRPGPDGKPISRI 887          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Arylsulfatase (n=1 Tax=Planctomycetes bacterium CA13 TaxID=2527986 RepID=A0A5C5Z5R1_9BACT)

HSP 1 Score: 206 bits (525), Expect = 3.080e-59
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRR-IWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            SLGPIFTVDDT KA N  K +K R IWAPE+HW+ D  RWALVHCPK HSSLA+++G +L GPWTHPMDG MG RHDPS+F DDDG  ++LW NTL+APLS+DLT YTA+P+RIDPSG+RP P+G+PISRI
Sbjct: 1429 SLGPIFTVDDTHKAANQNKKMKSRLIWAPEIHWMGD--RWALVHCPKSHSSLAVSAGKELSGPWTHPMDGGMGPRHDPSLFTDDDGAVYMLWQNTLIAPLSEDLTQYTAEPIRIDPSGTRPAPDGKPISRI 1557          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Beta-galactosidase (n=2 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C5ZFZ5_9BACT)

HSP 1 Score: 204 bits (519), Expect = 4.520e-59
Identity = 96/131 (73.28%), Postives = 110/131 (83.97%), Query Frame = 1
Query:    1 SLGPIFTVDDTM-KAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            SLG IF+ DD   +A N KK    RIWAPEVHWL D  RWA+VHCPKQ SSLAL+SG +L+GPW+HPM G MG RHDPS+F DDDG R+LLWGNT+VAPLSDDLT+YTA+PVRIDPSGSRPGP+G+PISRI
Sbjct:  564 SLGVIFSTDDLYERANNKKKQDAGRIWAPEVHWLGD--RWAVVHCPKQVSSLALSSGKELKGPWSHPMKGSMGPRHDPSLFTDDDGTRYLLWGNTMVAPLSDDLTSYTAEPVRIDPSGSRPGPDGKPISRI 692          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Glycoside (hydrolase family 2 n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353B1L9_9PLAN)

HSP 1 Score: 204 bits (520), Expect = 1.280e-58
Identity = 95/130 (73.08%), Postives = 108/130 (83.08%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            S+GPIF+  D ++ +  KK   R IWAPEVHWLADK RWALVHCPKQ SSLALT GADL+GPW HPM  ++GQRHDPSIF D+DG R+LLWGNT VAPLSDDLT YTA+PVRIDPSGSR GPNG+ I+RI
Sbjct:  860 SIGPIFSSRDILQKRKGKKNAGR-IWAPEVHWLADKGRWALVHCPKQVSSLALTEGADLKGPWFHPMGNKIGQRHDPSIFTDEDGTRYLLWGNTYVAPLSDDLTRYTAEPVRIDPSGSRLGPNGKQINRI 988          
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Match: Glycoside (hydrolase family 2 sugar binding protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=F0SS04_RUBBR)

HSP 1 Score: 202 bits (514), Expect = 8.390e-58
Identity = 90/130 (69.23%), Postives = 105/130 (80.77%), Query Frame = 1
Query:    1 SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSSLALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLSDDLTNYTADPVRIDPSGSRPGPNGEPISRI 390
            SLG +FT++DT KA   KK   RRIWAPEVHW+   NRWALVHCPK HSSLAL++G  L GPWTHPM+G+MG RHDPS+F DDDG  +LLWGNTLVAPL++DL+ YTADPVRIDP+GSR  P+G PI  I
Sbjct:  859 SLGVVFTLEDTWKAGQGKKIGNRRIWAPEVHWMEHLNRWALVHCPKMHSSLALSAGESLSGPWTHPMNGKMGPRHDPSLFTDDDGVTYLLWGNTLVAPLNEDLSGYTADPVRIDPAGSRLSPDGNPIRHI 988          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77502.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.100e-7378.46protein (Fragment) n=1 Tax=marine sediment metagen... [more]
Beta-xylosidase5.120e-7280.00n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 ... [more]
Beta-xylosidase1.200e-7179.23n=3 Tax=PVC group TaxID=1783257 RepID=A0A349VJF1_9... [more]
Glycoside2.560e-6780.00hydrolase family 2 sugar binding protein n=2 Tax=R... [more]
family7.140e-6270.0043 glycosylhydrolase n=2 Tax=unclassified Rhodopir... [more]
Choline-sulfatase2.480e-6170.77n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepI... [more]
Arylsulfatase3.080e-5970.99n=1 Tax=Planctomycetes bacterium CA13 TaxID=252798... [more]
Beta-galactosidase4.520e-5973.28n=2 Tax=Rhodopirellula pilleata TaxID=2714738 RepI... [more]
Glycoside1.280e-5873.08hydrolase family 2 n=1 Tax=Planctomycetaceae bacte... [more]
Glycoside8.390e-5869.23hydrolase family 2 sugar binding protein n=3 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs77502contigH-canaliculatus_M_contigs77502:53..442 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog756272.Plabr_3752
PFAMsGlyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N,Glyco_hydro_43
Model size390
Max annot lvl203682|Planctomycetes
KEGG rclassRC00049,RC00452
KEGG koko:K01190
KEGG ReactionR01105,R01678,R03355,R04783,R06114
KEGG Pathwayko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.37e-58
EggNOG OGsCOG3250@1|root,COG3507@1|root,COG3250@2|Bacteria,COG3507@2|Bacteria,2IWTW@203682|Planctomycetes
EC3.2.1.23
DescriptionGlycosyl hydrolases family 2
Cds size390
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854112.3246582-CDS-H-canaliculatus_M_contigs77502:52..4421696854112.3246582-CDS-H-canaliculatus_M_contigs77502:52..442Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs77502 53..442 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs77502.1.1prot_H-canaliculatus_M_contigs77502.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs77502 53..442 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs77502.1.1

>prot_H-canaliculatus_M_contigs77502.1.1 ID=prot_H-canaliculatus_M_contigs77502.1.1|Name=mRNA_H-canaliculatus_M_contigs77502.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=130bp
SLGPIFTVDDTMKAKNSKKTVKRRIWAPEVHWLADKNRWALVHCPKQHSS
LALTSGADLQGPWTHPMDGEMGQRHDPSIFADDDGKRFLLWGNTLVAPLS
DDLTNYTADPVRIDPSGSRPGPNGEPISRI
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mRNA from alignment at H-canaliculatus_M_contigs77502:53..442-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs77502.1.1 ID=mRNA_H-canaliculatus_M_contigs77502.1.1|Name=mRNA_H-canaliculatus_M_contigs77502.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=390bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77502:53..442- (Hapterophycus canaliculatus Oshoro7m male)
TCACTGGGCCCGATCTTCACCGTCGACGACACGATGAAGGCGAAAAACAG CAAGAAAACTGTGAAGCGTCGGATTTGGGCGCCGGAAGTTCACTGGCTGG CTGACAAGAACCGCTGGGCACTCGTGCACTGCCCGAAACAACATTCCAGC CTGGCGCTGACCAGCGGTGCGGACTTGCAAGGTCCCTGGACGCACCCGAT GGATGGTGAGATGGGGCAACGGCACGATCCTTCCATTTTTGCCGACGACG ATGGCAAACGTTTTCTGTTGTGGGGCAATACGTTGGTTGCACCACTCAGC GACGACTTGACCAACTACACCGCCGATCCGGTTCGCATCGATCCATCCGG CTCTCGCCCAGGGCCCAACGGCGAGCCAATTAGTCGCATC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77502:53..442-

>mRNA_H-canaliculatus_M_contigs77502.1.1 ID=mRNA_H-canaliculatus_M_contigs77502.1.1|Name=mRNA_H-canaliculatus_M_contigs77502.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=390bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77502:53..442- (Hapterophycus canaliculatus Oshoro7m male)
TCACTGGGCCCGATCTTCACCGTCGACGACACGATGAAGGCGAAAAACAG
CAAGAAAACTGTGAAGCGTCGGATTTGGGCGCCGGAAGTTCACTGGCTGG
CTGACAAGAACCGCTGGGCACTCGTGCACTGCCCGAAACAACATTCCAGC
CTGGCGCTGACCAGCGGTGCGGACTTGCAAGGTCCCTGGACGCACCCGAT
GGATGGTGAGATGGGGCAACGGCACGATCCTTCCATTTTTGCCGACGACG
ATGGCAAACGTTTTCTGTTGTGGGGCAATACGTTGGTTGCACCACTCAGC
GACGACTTGACCAACTACACCGCCGATCCGGTTCGCATCGATCCATCCGG
CTCTCGCCCAGGGCCCAACGGCGAGCCAATTAGTCGCATC
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