prot_H-canaliculatus_M_contigs77471.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs77471.1.1
Unique Nameprot_H-canaliculatus_M_contigs77471.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length78
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs77471.1.1 vs. uniprot
Match: A0A6H5KYG2_9PHAE (APC1_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYG2_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.230e-20
Identity = 52/80 (65.00%), Postives = 54/80 (67.50%), Query Frame = 0 
Query:    1 GDSHDVTLPCEARLLQPLGEGLLIQRFAGGNGDGSEFSSAAAYGGEDEQED--DGLDPLFSVPSLFTLLHPLDELRPVAL 78
            GDSHDVTLPCEARLLQ LGEGLL+QR+AG                        DGLDP FSVPSLFTLLHPLDELRPVAL
Sbjct:  181 GDSHDVTLPCEARLLQSLGEGLLVQRYAGXXXXXXXXXXXXXXXXXXXXXXXXDGLDPSFSVPSLFTLLHPLDELRPVAL 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77471.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYG2_9PHAE2.230e-2065.00APC1_C domain-containing protein n=2 Tax=Ectocarpu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs77471contigH-canaliculatus_M_contigs77471:12..245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs77471.1.1mRNA_H-canaliculatus_M_contigs77471.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs77471 12..245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs77471.1.1 ID=prot_H-canaliculatus_M_contigs77471.1.1|Name=mRNA_H-canaliculatus_M_contigs77471.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=78bp
GDSHDVTLPCEARLLQPLGEGLLIQRFAGGNGDGSEFSSAAAYGGEDEQE
DDGLDPLFSVPSLFTLLHPLDELRPVAL
back to top