mRNA_H-canaliculatus_M_contigs7746.1.2 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7746.1.2
Unique NamemRNA_H-canaliculatus_M_contigs7746.1.2
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ94_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 3.070e-149
Identity = 227/314 (72.29%), Postives = 244/314 (77.71%), Query Frame = 1
Query:    1 MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGV---GNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAM-KPHEEGPERQPQQSSQRGAQ-------------EGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPPPAGFVPSSS 891
            MRQEIEVMRH+YHRSVVLLFEVLEE+DEWE     DG EGRVCMV+EYMEGG TMTFDDESGLFKRP G   G  A       G+ YSEDEAKPLFRDLLQGLLYLHGKNIVHRD+KPDNLLIFENGTLRICDFGCAR+VK   RQPS   DA  S+AM + HEE                            EG LT SVGTYTFHSPE + GDG+ YSG+AADAWAAACTLYCW FGCLPFHD SLERVFEKIKEQ++DVG+AVSPEL SLL+GMLCKDP  R+GLQAALEHPWMRGVPDPPPPAGF+P SS
Sbjct:  136 MRQEIEVMRHLYHRSVVLLFEVLEEQDEWE-----DGQEGRVCMVEEYMEGGPTMTFDDESGLFKRPDGGGSGTKAXXXXXXXGSFYSEDEAKPLFRDLLQGLLYLHGKNIVHRDVKPDNLLIFENGTLRICDFGCARYVKIVRRQPSKSKDATGSEAMGRCHEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXEG-LTGSVGTYTFHSPESVMGDGKTYSGRAADAWAAACTLYCWTFGCLPFHDPSLERVFEKIKEQQVDVGKAVSPELTSLLRGMLCKDPLQRIGLQAALEHPWMRGVPDPPPPAGFIPKSS 443          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH8_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 3.360e-147
Identity = 224/316 (70.89%), Postives = 242/316 (76.58%), Query Frame = 1
Query:    1 MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVG----GCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQ---------------EGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPPPAGFVPSSS 891
            MRQEIEVMRH+YHRSVVLLFEVLEE+D WE     DG EGRVCMVQEYMEGG TMTFDDESGLFKRP G   G            + YSEDEAKPLFRDLLQGLLYLHGKNIVHRD+KPDNLLIFENGTLRICDFGCAR+VK   RQPS   DA  S+AM   +   ++QP                        EG LT SVGTYTFHSPE + GDG+ YSG+AADAWAAACTLYCW FGCLPFHD SLERVFEKIK QE+DVG+AVSP+LASLL+GMLCKDP  R+GLQAALEHPWMRGVPDPPPPAGF+P SS
Sbjct:  149 MRQEIEVMRHLYHRSVVLLFEVLEEQDGWE-----DGQEGRVCMVQEYMEGGPTMTFDDESGLFKRPDGGGSGTXXXXXXXXXXXSFYSEDEAKPLFRDLLQGLLYLHGKNIVHRDVKPDNLLIFENGTLRICDFGCARYVKIVRRQPSKSKDANGSEAMGRCQGEDQQQPXXXXXXXXXXXXXXXXXXXXXXXXEG-LTGSVGTYTFHSPESVMGDGKTYSGRAADAWAAACTLYCWTFGCLPFHDPSLERVFEKIKGQEVDVGKAVSPDLASLLRGMLCKDPLQRIGLQAALEHPWMRGVPDPPPPAGFIPKSS 458          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Kinase-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED4_9STRA)

HSP 1 Score: 215 bits (547), Expect = 6.490e-64
Identity = 125/286 (43.71%), Postives = 163/286 (56.99%), Query Frame = 1
Query:    4 RQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPP 861
            R+EI++MRH+YHR+VVLLFEVLE  D +    DDD H   +CMV E ME G TM    + G F   +G      AGV     + E  A+ +F DL++G+ YLHG+ I HRDIKPDNL+I+ENGTLRI DFGCA +  P            A DA                        L D+ G YTF +PE I     PY G  AD W+A  TLY WIFG +PF+  S E ++E I+   +++G+A+S +L  LL  +L KDPR R+ LQ  L H W++ VP+PP
Sbjct:  126 RREIDIMRHLYHRNVVLLFEVLESADTY----DDDSH---ICMVLELMERGPTMVCGAD-GTFVAERGE-----AGV-----WPEAAAQLMFADLVRGMQYLHGRGICHRDIKPDNLMIYENGTLRITDFGCAVYFPPGP----------ARDAAL----------------------LRDTAGAYTFLAPECINLKADPYCGYGADIWSAGVTLYTWIFGEVPFYSDSPEPLYEAIRNDPVELGEALSADLLDLLARLLDKDPRSRITLQQCLSHAWLKDVPEPP 361          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPN3_PHYSP)

HSP 1 Score: 150 bits (378), Expect = 6.060e-39
Identity = 97/285 (34.04%), Postives = 135/285 (47.37%), Query Frame = 1
Query:   10 EIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTF-DDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDV--------GQAVSPELASLLQGMLCKDPRGRVGLQAALEHPW 837
            EIE+MR +YHR++VLLFEV+E  D             ++ MV EYM  G  M +  D    + R  G T+             E+ A+    D+L GL YLH + I HRDIKPDN+L+ + G   + DFGCA+     G         + S+AM+                      LTD+VGTY F +PE  +G+  PY     D WA     + ++FG LPF  +S   +F++I   E+ +         Q VSPE   LL  +L KDP  R+ +  A  HPW
Sbjct:  142 EIEIMRSLYHRNIVLLFEVIEADDS-----------DKLYMVLEYMARGPCMVYRPDAKDFYSRVTGGTL------------PEELARSYLSDILLGLQYLHQRQICHRDIKPDNVLLNDTGRCHLTDFGCAKAFAAYGH--------DGSEAMR----------------------LTDTVGTYQFLAPECCSGE--PYDPFKVDIWAVGVVYFIFLFGRLPFTSESARELFDEITRAEVVLPGPDESRRDQPVSPEARDLLHRLLEKDPAQRITIDEAFRHPW 371          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Predicted (protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SLT3_PHYPA)

HSP 1 Score: 145 bits (366), Expect = 3.520e-38
Identity = 91/279 (32.62%), Postives = 130/279 (46.59%), Query Frame = 1
Query:    7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVG-VGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
            +E+ +M+ + H ++V L EV+           DD       MV EY+EGG    F+               GC   G +G+A     A+  FRD++ GL+YLH  NI+H DIKP+NLL+  +G ++ICDFG +R  +    +                                    L  S GT  + +PE     G  Y GKAAD WA  CTLYC + G  PF   +L+  ++KI    L +   V P+LA LL+G+LCKD   R+ L+A   H W+
Sbjct:   67 REVMIMKQLDHPNIVKLIEVI-----------DDPQSDNYYMVLEYVEGG--WIFE---------------GCGPAGGIGDA----RARQYFRDVVAGLIYLHKNNIIHGDIKPENLLVSSDGHIKICDFGVSRKFEDGNDE------------------------------------LRRSPGTPVYTAPECCL--GLTYHGKAADVWALGCTLYCMVLGSYPFKGDNLQSTYDKIVNDPLHISGHVEPDLADLLRGLLCKDATKRLSLEAVANHSWV 275          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Hypothetical (protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LB82_SPIIN)

HSP 1 Score: 147 bits (372), Expect = 5.650e-38
Identity = 90/278 (32.37%), Postives = 130/278 (46.76%), Query Frame = 1
Query:    7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
            +E+ +M+ + H ++V L EV+           DD +     MV EY+EG                       C G G  +   ED ++   RD++ GL+YLH  NI+H DIKPDNLL+  +G ++I DF  ++  +    +                                    L  S GT  F +PE     G  YSG+AAD WA   TLYC +FG  PF  +SL+  ++KI    L + + VSP L  L++G+LCKDPR R+ L+A  EHPW+
Sbjct:  168 REVSIMKILDHPNIVKLVEVI-----------DDPNSDHFYMVLEYIEGKWV--------------------CEGSGPASGIGEDASRTYLRDIIAGLMYLHSNNIIHGDIKPDNLLVTSSGRVKIGDFSVSQVFEDDNDE------------------------------------LRRSPGTPVFTAPECC--QGLTYSGRAADTWAVGVTLYCMLFGQYPFLGESLQDTYDKIVNDPLMIPEGVSPLLKDLVEGLLCKDPRRRLTLKAVSEHPWV 376          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5CRV6_AMBTC)

HSP 1 Score: 147 bits (372), Expect = 6.720e-38
Identity = 92/278 (33.09%), Postives = 129/278 (46.40%), Query Frame = 1
Query:    7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
            +E+ +M+ + H ++V L EV+++       PD D       MV EY+EG                       C G G      E  ++  FRD++ GL+YLH  NIVH DIKP+NLL+  NG ++ICDF  +R  +    +                                    L  S GT  F +PE     G  Y GKAAD WA   TLYC  FGC PF   +L+  +++I    L + + + PEL  LL+G+LCKDP+ R  L A +EHPW+
Sbjct:  155 REVLIMKMLGHPNIVNLIEVIDD-------PDTD----YFYMVLEYVEGKWI--------------------CEGSGPPGGIGETTSRRYFRDVVAGLMYLHAHNIVHGDIKPENLLVTSNGRVKICDFSVSRIFEDDNDE------------------------------------LRRSPGTPVFTAPECCL--GLTYHGKAADVWALGVTLYCMTFGCYPFLGDTLQDTYDRIVNNPLHLPEDMDPELKDLLEGLLCKDPKQRFTLDAIVEHPWV 363          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IP02_PHYPA)

HSP 1 Score: 145 bits (366), Expect = 4.460e-37
Identity = 91/279 (32.62%), Postives = 130/279 (46.59%), Query Frame = 1
Query:    7 QEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVG-VGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWM 840
            +E+ +M+ + H ++V L EV+           DD       MV EY+EGG    F+               GC   G +G+A     A+  FRD++ GL+YLH  NI+H DIKP+NLL+  +G ++ICDFG +R  +    +                                    L  S GT  + +PE     G  Y GKAAD WA  CTLYC + G  PF   +L+  ++KI    L +   V P+LA LL+G+LCKD   R+ L+A   H W+
Sbjct:  182 REVMIMKQLDHPNIVKLIEVI-----------DDPQSDNYYMVLEYVEGG--WIFE---------------GCGPAGGIGDA----RARQYFRDVVAGLIYLHKNNIIHGDIKPENLLVSSDGHIKICDFGVSRKFEDGNDE------------------------------------LRRSPGTPVYTAPECCL--GLTYHGKAADVWALGCTLYCMVLGSYPFKGDNLQSTYDKIVNDPLHISGHVEPDLADLLRGLLCKDATKRLSLEAVANHSWV 390          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LDE2_CHEQI)

HSP 1 Score: 141 bits (356), Expect = 4.660e-37
Identity = 92/288 (31.94%), Postives = 132/288 (45.83%), Query Frame = 1
Query:    1 MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPP 864
            ++Q + +M+ + H ++V L EV+ +       PD D       MV EY+EG     +D                C G G      E  A+   RD++ GL+YLH  NIVH DIKP NLL+  NGT++I DF  ++  +    +                                    L  S GT    +PE     G  Y GKAAD WA   TLYC I G  PF  ++L+  ++KI    +D+ + ++P+L +LL+G+LCKDP  R+ L    EHPW+ G   P P
Sbjct:    9 LQQFVLIMKIVSHPNIVNLIEVIND-------PDTD----HFYMVLEYVEG----KWD----------------CEGAGPPGGLGEAIARKYLRDIVSGLMYLHSHNIVHMDIKPQNLLVSRNGTVKIADFSVSQVFEEDNDE------------------------------------LRRSPGTPVITAPECCL--GLTYRGKAADTWAVGITLYCMIMGKFPFIGETLQDTYDKIVNDPIDLPENINPQLRNLLEGLLCKDPDQRLTLNMVAEHPWVIGEEGPLP 227          
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SXF8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.810e-37
Identity = 101/297 (34.01%), Postives = 143/297 (48.15%), Query Frame = 1
Query:   10 EIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYMEGGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGLLYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDAEASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGRPYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQEL------DVGQ--AVSPELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPPPAGF 876
            EIE+MR +YHR++VLLFEV+E  D             ++ MV EYM  G  M +        RP           GV    SE+ A+    D+L GL YLH + + HRDIKPDN+L+ ++G   I DFGCA+ V       +   D   + A +P                     L+D+VGTY F SPE  +G+  PY     D WA     + ++FG LPF  +S   +F++I   E+      + G+  ++SPE  +LL+ +L KDP  R+ +  AL HPW     D   P  F
Sbjct:  155 EIEIMRSLYHRNIVLLFEVIEASDS-----------DKLYMVLEYMACGPCMIY--------RPDTKDFYSRVTEGV---LSEELARSYLSDILLGLQYLHQRQVCHRDIKPDNILLNDSGRCHITDFGCAKAVN------NISDDVSDNSAAEPV-------------------FLSDTVGTYQFLSPECCSGE--PYDPFKVDIWAVGVVFFIFLFGRLPFTSESTRELFDEIIRAEIVLPGTEESGRELSLSPEGQNLLRRLLEKDPEQRITIVEALSHPWFTQDEDDEEPLSF 402          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7746.1.2 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein3.070e-14972.29kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein3.360e-14770.89kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Kinase-like6.490e-6443.71domain-containing protein n=1 Tax=Tribonema minus ... [more]
Protein6.060e-3934.04kinase domain-containing protein n=1 Tax=Phytophth... [more]
Predicted3.520e-3832.62protein (Fragment) n=1 Tax=Physcomitrium patens Ta... [more]
Hypothetical5.650e-3832.37protein n=2 Tax=Spirodela intermedia TaxID=51605 R... [more]
Protein6.720e-3833.09kinase domain-containing protein n=2 Tax=Amborella... [more]
Protein4.460e-3732.62kinase domain-containing protein n=1 Tax=Physcomit... [more]
Protein4.660e-3731.94kinase domain-containing protein n=1 Tax=Chenopodi... [more]
Protein4.810e-3734.01kinase domain-containing protein n=2 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7746contigH-canaliculatus_M_contigs7746:57..1637 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHH8
PFAMsPkinase
Model size894
Max annot lvl2759|Eukaryota
KEGG koko:K07298,ko:K07359
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04530,ko04920,ko04921,ko05034,map04068,map04140,map04150,map04151,map04152,map04211,map04530,map04920,map04921,map05034
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.51e-148
EggNOG OGsKOG0585@1|root,KOG0585@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-11_004020.1
EC2.7.11.1,2.7.11.17
Descriptionpeptidyl-threonine phosphorylation
Cds size894
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854112.0861058-CDS-H-canaliculatus_M_contigs7746:56..3981696854112.0861058-CDS-H-canaliculatus_M_contigs7746:56..398Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7746 57..398 +
1696854112.1044126-CDS-H-canaliculatus_M_contigs7746:1085..16371696854112.1044126-CDS-H-canaliculatus_M_contigs7746:1085..1637Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7746 1086..1637 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7746.1.2prot_H-canaliculatus_M_contigs7746.1.2Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7746 57..1637 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7746.1.2

>prot_H-canaliculatus_M_contigs7746.1.2 ID=prot_H-canaliculatus_M_contigs7746.1.2|Name=mRNA_H-canaliculatus_M_contigs7746.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=298bp
MRQEIEVMRHIYHRSVVLLFEVLEERDEWEGGPDDDGHEGRVCMVQEYME
GGATMTFDDESGLFKRPQGSTVGGCAGVGVGNAYSEDEAKPLFRDLLQGL
LYLHGKNIVHRDIKPDNLLIFENGTLRICDFGCARFVKPAGRQPSCGTDA
EASDAMKPHEEGPERQPQQSSQRGAQEGSLTDSVGTYTFHSPEMIAGDGR
PYSGKAADAWAAACTLYCWIFGCLPFHDQSLERVFEKIKEQELDVGQAVS
PELASLLQGMLCKDPRGRVGLQAALEHPWMRGVPDPPPPAGFVPSSS*
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mRNA from alignment at H-canaliculatus_M_contigs7746:57..1637+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7746.1.2 ID=mRNA_H-canaliculatus_M_contigs7746.1.2|Name=mRNA_H-canaliculatus_M_contigs7746.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1581bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7746:57..1637+ (Hapterophycus canaliculatus Oshoro7m male)
ATGCGTCAAGAGATAGAGGTGATGCGACATATTTACCATCGCAGCGTAGT TCTTCTATTCGAGGTGTTGGAAGAGCGAGATGAGTGGGAGGGCGGCCCGG ACGACGACGGCCATGAGGGCCGTGTTTGCATGGTTCAGGAGTATATGGAA GGCGGAGCAACGATGACGTTCGACGACGAATCGGGATTGTTCAAGCGCCC TCAGGGGAGCACGGTCGGCGGATGCGCAGGCGTGGGTGTGGGAAACGCCT ACTCGGAGGATGAGGCCAAGCCGCTCTTCCGCGACCTCCTGCAAGGGCTG CTTTACCTGCACGGAAAGAACATCGTGCACCGTGATATTAAGGTGTGCGC GCGTCGCGTCAGTAAATGCTTCGCAGGGTAGTCGATGTAAATGTATCGAA TCTCAGTTGAGAAGAGGCCCTCGACTCCAGATAGAAAAGAGGTTCTGCGT ACGATGGCGGCTTGATTAGTCGCCAGAGGTAAGCCAGTTTTCTACGGTAT ATGTGGCGAGGAATGCCAGGCGATGACCGAGCGGACTCGATTGGGGAAAG GGTAAGGTAGAGAGTTATAGGGTGCCATCGTGGACATTCGTGCCTCGCAA GGATCGGTCGCACTTCGGAGGAGCGACCAGAGTTGAGCATAGAGATCCAC GAAGAGTTGGGTTACTTCCCGACGATACGTAGATGGATGCTTATTTAGTT GTGCTCAGGGTTGCTAGGAAGAAACCACATCCTGATCTCCACATAGCCCT CCTCTTTTTTGCCGGAAGTCCGTGTGGCACGGTCTTTTCGTGCTCACTCA GAGATAAGTGAAGAGTTAATGCGCCATCTTGTATCAGAGAAAGGTGGCAA GGCGGAGACTCGGGCTGCTCAGGGCTCCATGACACCGCCAAGACACGAAA GCCATTTTGATTCGCCCTTTGCCACTCCTCTTCCCCCACCAATCCCTATC CTTCTTTGGTTCCTCTTCCCCCACCAATCCCTATCCTTCTTTGGCCTTCC TCCTGTCAACGGAACGTACCAAACACCAGCCGGATAATCTGCTAATCTTC GAAAACGGGACCCTCCGGATTTGCGACTTCGGTTGCGCCCGATTCGTGAA ACCCGCGGGCCGACAACCTTCTTGCGGCACGGACGCTGAAGCCTCGGACG CGATGAAGCCTCACGAAGAAGGCCCAGAACGACAACCGCAACAATCTTCA CAAAGGGGAGCGCAGGAAGGGAGCCTGACCGATTCTGTGGGGACCTATAC CTTTCACTCCCCGGAGATGATCGCGGGAGACGGCAGGCCCTACTCTGGAA AGGCAGCCGACGCCTGGGCGGCGGCGTGCACTCTTTACTGCTGGATCTTC GGGTGCCTGCCGTTTCATGACCAATCCCTCGAGCGGGTCTTCGAGAAGAT CAAGGAGCAGGAGTTGGACGTCGGGCAGGCGGTGTCACCAGAGCTGGCCT CGCTACTCCAGGGGATGCTCTGCAAGGATCCCCGCGGACGCGTTGGTCTG CAGGCTGCCCTTGAACACCCTTGGATGCGGGGAGTTCCAGACCCGCCCCC ACCTGCAGGATTTGTCCCTAGTTCCTCGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7746:57..1637+

>mRNA_H-canaliculatus_M_contigs7746.1.2 ID=mRNA_H-canaliculatus_M_contigs7746.1.2|Name=mRNA_H-canaliculatus_M_contigs7746.1.2|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=894bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7746:57..1637+ (Hapterophycus canaliculatus Oshoro7m male)
ATGCGTCAAGAGATAGAGGTGATGCGACATATTTACCATCGCAGCGTAGT
TCTTCTATTCGAGGTGTTGGAAGAGCGAGATGAGTGGGAGGGCGGCCCGG
ACGACGACGGCCATGAGGGCCGTGTTTGCATGGTTCAGGAGTATATGGAA
GGCGGAGCAACGATGACGTTCGACGACGAATCGGGATTGTTCAAGCGCCC
TCAGGGGAGCACGGTCGGCGGATGCGCAGGCGTGGGTGTGGGAAACGCCT
ACTCGGAGGATGAGGCCAAGCCGCTCTTCCGCGACCTCCTGCAAGGGCTG
CTTTACCTGCACGGAAAGAACATCGTGCACCGTGATATTAAGCCGGATAA
TCTGCTAATCTTCGAAAACGGGACCCTCCGGATTTGCGACTTCGGTTGCG
CCCGATTCGTGAAACCCGCGGGCCGACAACCTTCTTGCGGCACGGACGCT
GAAGCCTCGGACGCGATGAAGCCTCACGAAGAAGGCCCAGAACGACAACC
GCAACAATCTTCACAAAGGGGAGCGCAGGAAGGGAGCCTGACCGATTCTG
TGGGGACCTATACCTTTCACTCCCCGGAGATGATCGCGGGAGACGGCAGG
CCCTACTCTGGAAAGGCAGCCGACGCCTGGGCGGCGGCGTGCACTCTTTA
CTGCTGGATCTTCGGGTGCCTGCCGTTTCATGACCAATCCCTCGAGCGGG
TCTTCGAGAAGATCAAGGAGCAGGAGTTGGACGTCGGGCAGGCGGTGTCA
CCAGAGCTGGCCTCGCTACTCCAGGGGATGCTCTGCAAGGATCCCCGCGG
ACGCGTTGGTCTGCAGGCTGCCCTTGAACACCCTTGGATGCGGGGAGTTC
CAGACCCGCCCCCACCTGCAGGATTTGTCCCTAGTTCCTCGTAA
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