mRNA_H-canaliculatus_M_contigs7745.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-canaliculatus_M_contigs7745.1.1
Unique Name	mRNA_H-canaliculatus_M_contigs7745.1.1
Type	mRNA
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSQ9_9PHAE)

HSP 1 Score: 652 bits (1682), Expect = 1.550e-225
Identity = 342/613 (55.79%), Postives = 424/613 (69.17%), Query Frame = 1

Query:   34 QVGCTPGKNCWAGVYVDWTTNEVLHLEAGGRASISPG-ASADTRWGCLWWWTEEDLLHVHDCSNKSVTWAGASSELQRAPAQAGKPAGF--ELNTNKSDMQREAMPYHKTDGIGKILLVRDPFGFLFPGCLYALSMHSEASRREGKNQQVMVVINRDGAVTNAASGDRIASWAFLGADSVRSSSAESWVSGDSILLVFKTDHHQV----QASSMI*SREVKVSTLDGGRTWLSGSR-QSQVALKSSYDVHSRIVLSLLVP-TVSMFPLTAAVAPSLSHLLGDGPVVSEEEVTKSTSPFGNKVEPLIEVFEAVPTRSPSDDGRSPQDFNAIIVISRAVPRP-KERNELSCVIDGGRVRAVWLSWSMVLCSTAHVRANRVTIYIAFQDRRFSEDFVFLHARAPRHVRLGWPATESFDSTIRGLSWEPGGVESANPAKGGVPGSSGEKLLRTNLVICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDPAPDLPISSEGESAQDETVRLDGGQVHSFDSFMSARRKRLRYLLEEWAPERHTHCMPWVNYCS 1842
              GC  GK CWAGVYVD  TNE+ HLE GGR  +SPG A+AD   GCL WW EEDLLH  DC+ K  +     S+++R PA+AG  AGF  E+++    ++ +      + GIGKI LVRDPFGF+FPGC+Y LSM S +S +   +  V VV+NRDG VT+ A G+R+A W F    S+  ++ ESW SG+ +LL F TD  QV     A  +  SR+V++S+ DGGRTWL  S   SQ  L+   DV SRI+LSL+ P T+SMFPLTAAV+P + +L GD      +E+    +   N ++PL+EVFE  P R   D G +P++  AIIVISRAVPRP K   +LSCVI+G + RAVWLSW MVLCSTA V+A   T+YI F+D+RFS DF FLHA APRH+R+GWPATESF +  RG S +  G+E A  A+ GV    GE  L T LV+CT+FKNEA YLEEWLQYHQLLG+S+        VYLYDNGS+D SRDLLRK+ERS FV+VRDWPY GAQT+ALNDCLCRFRH+ARWMSFIDVDEFIDPAP LP+  + +S +    +LD  +    D +MSARRKRLR+LLE+  P RHTHCM WVNYCS
Sbjct:    1 MYGCVEGKRCWAGVYVDMATNEIWHLETGGRVYLSPGTAAADPLRGCLRWWAEEDLLHTADCNEKVFSRVDVVSKMRRDPARAGTLAGFTAEVSSTIDAVRGDGSAPANSGGIGKIRLVRDPFGFVFPGCMYVLSMQSGSSSKMANSDGVSVVLNRDGTVTSTAGGERVARWLFPRKKSLAGTNDESWASGNQVLLRFNTDFLQVGLPATAWEVGGSRDVRLSSSDGGRTWLPVSECNSQFKLEKDCDVDSRIILSLVAPLTLSMFPLTAAVSPLVRYLNGDNNF--NQEMAPPIATLRNNLQPLVEVFEIQPIRLDGDHGGAPKNIEAIIVISRAVPRPTKGEGDLSCVINGVQTRAVWLSWGMVLCSTARVKAKEATVYITFEDKRFSMDFSFLHAPAPRHLRVGWPATESFGALTRGFSQKAVGLEHA--AEIGVSDGFGEGPLETELVLCTMFKNEATYLEEWLQYHQLLGVSR--------VYLYDNGSSDRSRDLLRKFERSKFVQVRDWPYDGAQTEALNDCLCRFRHTARWMSFIDVDEFIDPAPGLPLRRKMDSVEGNLRQLDAHRFEFVDGYMSARRKRLRHLLEQSIPRRHTHCMAWVNYCS 601

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V6_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 4.820e-29
Identity = 71/157 (45.22%), Postives = 98/157 (62.42%), Query Frame = 1

Query:  256 LQRAPAQAGKPAGF--ELNTNKSDMQREAMPYHKTDGIGKILLVRDPFGFLFPGCLYALSMHSEASRREGKNQQVMVVINRDGAVTNAASGDRIASWAFLGADSVRSSSAESWVSGDSILLVFKTDHHQVQASSMI*----SREVKVSTLDGGRTWL 708
            ++R  AQAG  AGF  E+++    +  +      + GIGKI LVRDPFGF+FPGC+Y LSM S +SR+   +  V VV+NRDG VT+   G+R+A W F    S+  ++ ESW SG+ +LL F TD  QV  ++       SR+V +S+ DGGRTWL
Sbjct:    1 MRRDRAQAGTLAGFTAEVSSTIDAVGGDGSAPANSGGIGKIRLVRDPFGFVFPGCMYVLSMQSGSSRKMANSDGVSVVLNRDGTVTSTTGGERVARWFFPWKKSLGGTNDESWASGNEVLLRFNTDFSQVGLTATAWEVGGSRDVTLSSSDGGRTWL 157

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H1_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.370e-28
Identity = 166/670 (24.78%), Postives = 237/670 (35.37%), Query Frame = 1

Query:   61 CWAGVYVDWTTNEVLHLEAGGRASISPGASADTRWGCLWWWTEEDLLHVHDCSNKSVTWAGASSELQRAPAQAGKPAGFELNTNKSDMQREAMPYHKTDGIGKILLVRDPFGFLFPGCLYALSMHSEASRREGKNQQVMVVINRDGAVTNAASGDRIASWAFL---------------GADSVRSSSAESWVSGDSILLVFKTDHHQVQASSMI*SREVKVSTLDGGRTWLSGSRQSQVALKSSYDVHSRIVLSLLVPT--VSMFPLTAAVAPSLSHLL-GDGPVVSEEEVTKSTSPFGNKVEPLIEVFEAVPTRSPSDDGRSPQDFNAIIVISRAVPRP-KERNELSCVIDGGRVRAVWLSWSMVLCSTAH----VRANRVTIYIAFQDRRFSEDFVFLHARA--PRHVRLGWPATESFDSTIRGLSWEPGGVESANP--------------------------------------AKGGVPGSSGEKLLRTN-----------LVICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDPAPDLPISSEGESAQDETVRLDGGQVHSFDSFMSARRKRLRYLLEEWAPER--HTHCMPWVNYCS 1842
            CWAGVY D  +   L L   GRA++S GA A T               VH  +                 A    P  F     KS ++              + LV D  GF+FP   Y L   SE     G  + V V + RD ++ +  +      W                  G     +++A + ++ D  L        QV           ++ T D G  W     +   A          +VL L  PT  VS+FP T A+ P L +L  G+G     +    +  P  NK      +   +  +     G     F  +IV+   +  P K+ +   C I     RA W+SWSM +C+  H      A    + +     + ++D+      A  PRH  L W A +   +   G +W+   + + +                                       A  G P                      + +C   K EA YL+EW+ YH  LG+  A+ +                  +L  + R   V V  WP+  AQTQAL +CL R RHS RWM+FIDVDEFIDPAP  PI+ E   A+D                       L  +LE   P+R    HCMPWV YC+
Sbjct:  277 CWAGVYYDLQSQTSLLLSRVGRATVS-GAHA-TXXXXXXXXXXAGGAPVHSAAXXXXXXXXXXXXXXXXAASDRSPRTF-FERKKSSLE------------SAVRLVEDMEGFVFPDSAYELWRPSEGVGVAG-GEWVRVALRRDCSIVSPTNPSLKGMWPGCKTPQRTPSLTLEIHNGTAPAAANAAAASLAADPPLAPPSQLQLQVH----------RLWTADHGGEWWEDPPEGAPA-----GARPVLVLRLEQPTLQVSLFPATDALRPYLEYLADGEG-----DAQGPAGPPLANKPAHPPPILRVMAPQLEWRSGERAPSFPFLIVLGTGLQNPGKDLHRFQCKIGERWSRAWWVSWSMAVCAVPHDASASAAAAAPLSLWLDGVKVADDYEVDAGTAIRPRHAGL-WLAQQGLSTN--GRAWDHHNIRARSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXIGCAWAQREWAHLGPPRHKXXXXXXXXXXXXXXXXXXXMSVCATIKGEAPYLDEWIAYHTNLGVRGATAR------------------VLEPWVRRGLVTVELWPHVAAQTQALTECLNRHRHSTRWMTFIDVDEFIDPAPARPIA-EPRHAED-----------------------LLPILEPNGPDRGADVHCMPWVAYCA 865

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: glycosyltransferase (family 92 protein n=1 Tax=Limosilactobacillus reuteri TaxID=1598 RepID=UPI000BEECF63)

HSP 1 Score: 102 bits (254), Expect = 3.660e-20
Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 1

Query: 1351 NLVICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDPAPDLPI 1674
            N+ IC IFKNEA YL EWL+Y+ ++G+           YLY+N S DE R++L+ Y  S  V + D+P+  AQ +A  DC+ +F++ A+W+ F+D+DEFI P  D  I
Sbjct:   54 NVAICAIFKNEAPYLREWLEYNLIIGVEH--------FYLYNNNSNDEYREVLKPYVESGKVTLIDFPFEHAQIRAYKDCIEKFKNKAKWIGFLDIDEFIVPIKDNSI 153

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Limosilactobacillus reuteri TaxID=1598 RepID=A0A1S9API0_LIMRT)

HSP 1 Score: 100 bits (250), Expect = 6.080e-20
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 1

Query: 1351 NLVICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDPAPDLPI 1674
            N+ +C IFKNEA YL+EW++YH L+G+           YLY+N S D    +L+ Y   N V + D+PY  AQ +A  +C+ ++++ +RW+ FID+DEF+ P  D  I
Sbjct:   11 NVSLCAIFKNEAPYLKEWIEYHSLIGVDH--------FYLYNNNSNDNYMSILKPYVEKNKVTIIDFPYEHAQMKAYGNCIKKYKNESRWIGFIDIDEFVVPIKDNDI 110

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: glycosyltransferase (family 92 protein n=1 Tax=Lactococcus lactis subsp. cremoris TaxID=1359 RepID=UPI0007B26746)

HSP 1 Score: 96.7 bits (239), Expect = 1.370e-19
Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1

Query: 1360 ICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDP 1656
            IC IFK+EA YL+EW++YH+  G+          +YLY+N STD    +++ Y    ++++ DWP   AQ +A +DC  RFR+   W+ FID+DEFI P
Sbjct:   56 ICGIFKDEAFYLKEWIEYHKKAGVDH--------IYLYNNNSTDNYLTVIKPYLEERYIDLIDWPKSQAQMEAYHDCFNRFRNETSWLGFIDIDEFIVP 146

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: glycosyltransferase (family 92 protein n=1 Tax=Lactobacillus delbrueckii TaxID=1584 RepID=UPI00155ED8CC)

HSP 1 Score: 98.6 bits (244), Expect = 6.540e-19
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 1

Query: 1360 ICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDPAPDLPISS 1680
            +C IFKNEA YL+EW++Y++++G+          +YLY+N S D   +++  Y    FV + DWPY   Q +A  DC  RFR    W+ FID+DEF+ P  D  I S
Sbjct:   54 LCGIFKNEAPYLKEWIEYYKIVGVDH--------IYLYNNNSDDNFMEIIAPYVDEGFVTLVDWPYNQKQMEAYKDCAKRFRSETYWLGFIDIDEFVVPVVDDNIKS 152

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bacteroides xylanisolvens TaxID=371601 RepID=A0A1Y4VSQ0_9BACE)

HSP 1 Score: 98.6 bits (244), Expect = 7.080e-19
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 1

Query: 1321 GSSGEKLLRTNLVICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFI 1650
            G    ++L+  L +C IFKNEA +L+EWL +H +LG+           Y+Y+N STD  R++++ Y     + + +WPY  +Q  A  DC  RFR    W+SF+D DEFI
Sbjct:   37 GCKDSRILKYRLSLCLIFKNEAPFLKEWLDFHFMLGVEH--------FYMYNNNSTDNFREIIQPYIEKGIITLIEWPYEQSQFMAYKDCYDRFRFETNWLSFLDADEFI 138

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BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: Glycosyltransferase (n=1 Tax=Roseburia sp. AM51-8 TaxID=2292366 RepID=A0A3R6LKV0_9FIRM)

HSP 1 Score: 94.7 bits (234), Expect = 8.940e-19
Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 1

Query: 1360 ICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDP 1656
            I  IFKNEA YL+EW+++H+++G+           YLY+N S D  R++L  Y + N V + DWP   AQ +A  DC+ ++    RWM F+D+DEF+ P
Sbjct:   58 IGAIFKNEALYLKEWIEFHRIVGVEH--------FYLYNNNSDDNYREVLEPYIKRNIVTLVDWPKNQAQIEAYKDCIHKYAKETRWMGFVDIDEFVVP 148

[Close]

BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Match: glycosyltransferase (family 92 protein n=1 Tax=Limosilactobacillus fermentum TaxID=1613 RepID=UPI0020260576)

HSP 1 Score: 97.8 bits (242), Expect = 1.310e-18
Identity = 44/108 (40.74%), Postives = 69/108 (63.89%), Query Frame = 1

Query: 1333 EKLLRTNLVICTIFKNEAAYLEEWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRDWPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDP 1656
            +K  + ++V+C IFKNEA YL EW++YH ++G+           YLY+N S D  + +L+ Y     V + D+PY+ AQ +A  DC+ +FR SA+W+ F+D+DEF+ P
Sbjct:   50 DKQKKYDVVLCAIFKNEAPYLREWIEYHLIVGVDH--------FYLYNNNSDDNYKKVLKPYIDEEKVTLIDFPYKHAQMKAYCDCIEKFRKSAKWIGFLDIDEFVVP 149

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.

BLAST of mRNA_H-canaliculatus_M_contigs7745.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Uncharacterized	1.550e-225	55.79	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	4.820e-29	45.22	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	4.370e-28	24.78	protein n=1 Tax=Tribonema minus TaxID=303371 RepID...	[more]
glycosyltransferase	3.660e-20	43.52	family 92 protein n=1 Tax=Limosilactobacillus reut...	[more]
Uncharacterized	6.080e-20	40.74	protein n=2 Tax=Limosilactobacillus reuteri TaxID=...	[more]
glycosyltransferase	1.370e-19	42.42	family 92 protein n=1 Tax=Lactococcus lactis subsp...	[more]
glycosyltransferase	6.540e-19	41.12	family 92 protein n=1 Tax=Lactobacillus delbruecki...	[more]
Uncharacterized	7.080e-19	39.09	protein n=1 Tax=Bacteroides xylanisolvens TaxID=37...	[more]
Glycosyltransferase	8.940e-19	41.41	n=1 Tax=Roseburia sp. AM51-8 TaxID=2292366 RepID=A...	[more]
glycosyltransferase	1.310e-18	40.74	family 92 protein n=1 Tax=Limosilactobacillus ferm...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs7745	contig	H-canaliculatus_M_contigs7745:504..5204 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	1002367.HMPREF0673_01304
PFAMs	Glyco_transf_92
Model size	1842
Max annot lvl	976\|Bacteroidetes
Hectar predicted targeting category	other localisation
Exons	7
Evalue	3.06e-19
EggNOG OGs	COG0463@1\|root,COG0463@2\|Bacteria,4NW1M@976\|Bacteroidetes,2G2GR@200643\|Bacteroidia
Description	Glycosyltransferase family 92
Cds size	1044
COG category	M

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs7745.1.1	prot_H-canaliculatus_M_contigs7745.1.1	Hapterophycus canaliculatus Oshoro7m male	polypeptide	H-canaliculatus_M_contigs7745 1536..5204 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1696854111.9592724-UTR-H-canaliculatus_M_contigs7745:503..1162	1696854111.9592724-UTR-H-canaliculatus_M_contigs7745:503..1162	Hapterophycus canaliculatus Oshoro7m male	UTR	H-canaliculatus_M_contigs7745 504..1162 +
1696854111.9733899-UTR-H-canaliculatus_M_contigs7745:1396..1535	1696854111.9733899-UTR-H-canaliculatus_M_contigs7745:1396..1535	Hapterophycus canaliculatus Oshoro7m male	UTR	H-canaliculatus_M_contigs7745 1397..1535 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1696854111.9916205-CDS-H-canaliculatus_M_contigs7745:1535..1769	1696854111.9916205-CDS-H-canaliculatus_M_contigs7745:1535..1769	Hapterophycus canaliculatus Oshoro7m male	CDS	H-canaliculatus_M_contigs7745 1536..1769 +
1696854112.0046635-CDS-H-canaliculatus_M_contigs7745:2707..2784	1696854112.0046635-CDS-H-canaliculatus_M_contigs7745:2707..2784	Hapterophycus canaliculatus Oshoro7m male	CDS	H-canaliculatus_M_contigs7745 2708..2784 +
1696854112.0172696-CDS-H-canaliculatus_M_contigs7745:3087..3439	1696854112.0172696-CDS-H-canaliculatus_M_contigs7745:3087..3439	Hapterophycus canaliculatus Oshoro7m male	CDS	H-canaliculatus_M_contigs7745 3088..3439 +
1696854112.0318768-CDS-H-canaliculatus_M_contigs7745:4567..4722	1696854112.0318768-CDS-H-canaliculatus_M_contigs7745:4567..4722	Hapterophycus canaliculatus Oshoro7m male	CDS	H-canaliculatus_M_contigs7745 4568..4722 +
1696854112.0458055-CDS-H-canaliculatus_M_contigs7745:4835..4985	1696854112.0458055-CDS-H-canaliculatus_M_contigs7745:4835..4985	Hapterophycus canaliculatus Oshoro7m male	CDS	H-canaliculatus_M_contigs7745 4836..4985 +
1696854112.0574646-CDS-H-canaliculatus_M_contigs7745:5128..5204	1696854112.0574646-CDS-H-canaliculatus_M_contigs7745:5128..5204	Hapterophycus canaliculatus Oshoro7m male	CDS	H-canaliculatus_M_contigs7745 5129..5204 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-canaliculatus_M_contigs7745:504..5204+
coding sequence from alignment at H-canaliculatus_M_contigs7745:504..5204+

protein sequence of mRNA_H-canaliculatus_M_contigs7745.1.1

>prot_H-canaliculatus_M_contigs7745.1.1 ID=prot_H-canaliculatus_M_contigs7745.1.1|Name=mRNA_H-canaliculatus_M_contigs7745.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=348bp
MFPLTAAVAPSLSHLLGDGPVVSEEEVTKSTSPFGNKVEPLIEVFEAVPT
RSPSDDGRSPQDFNAIIVISRAVPRPKERNELSCVIDGGRVRAVWLSWSM
VLCSTAHVRANRVTIYIAFQDRRFSEDFVFLHARAPRHVRLGWPATESFD
STIRGLSWEPGGVESANPAKGGVPGSSGEKLLRTNLVICTIFKNEAAYLE
EWLQYHQLLGISKASLKRNHLVYLYDNGSTDESRDLLRKYERSNFVEVRD
WPYRGAQTQALNDCLCRFRHSARWMSFIDVDEFIDPAPDLPISSEGESAQ
DETVRLDGGQVHSFDSFMSARRKRLRYLLEEWAPERHTHCMPWVNYCS

mRNA from alignment at H-canaliculatus_M_contigs7745:504..5204+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-canaliculatus_M_contigs7745.1.1 ID=mRNA_H-canaliculatus_M_contigs7745.1.1|Name=mRNA_H-canaliculatus_M_contigs7745.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4701bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7745:504..5204+ (Hapterophycus canaliculatus Oshoro7m male)
AGCTCGCTACACCTAGGTGGCATTCCGGATTATCAAGTTGGATGCACTCC
GGGCAAGAATTGCTGGGCGGGGGTGTATGTGGACTGGACGACGAACGAGG
TGCTGCATCTCGAAGCTGGTGGGCGTGCATCTATCTCTCCAGGCGCAAGC
GCCGACACTCGATGGGGGTGCCTCTGGTGGTGGACAGAAGAAGATCTACT
ACACGTCCACGATTGCAGCAACAAGTCTGTCACATGGGCTGGTGCCTCCA
GCGAACTCCAGCGCGCTCCGGCACAAGCCGGGAAACCGGCTGGATTTGAA
CTCAACACGAACAAATCTGACATGCAGCGGGAAGCAATGCCATACCACAA
GACCGATGGCATCGGCAAGATCCTTCTTGTTCGCGATCCATTCGGGTTTT
TGTTTCCTGGTTGTCTCTACGCGCTCTCCATGCATTCAGAGGCTTCGCGC
AGGGAAGGAAAAAACCAACAAGTTATGGTGGTGATCAACAGGGACGGAGC
CGTCACAAACGCAGCAAGCGGAGATCGCATTGCGAGCTGGGCTTTTCTTG
GGGCTGATTCCGTTAGAAGTTCAAGCGCTGAGTCCTGGGTTTCAGGAGAT
TCAATACTGCTCGTGTTCAAGACGGATCACCATCAGGTGCAAGCAAGCTC
GATGATTTGGTAAGGTGCTCGCAGCTGAGGCGAACTCTTCATGCTTTCAC
CGGTTCCCACTAACTTTGTTGTACTGACCTGTTTGTGTTCCTTCCTTTTT
GTGTATTGAACGTCTAGGGTAAGCATGCGTCTTCGTGCCTAGAAAAATAT
TCGGTGTAACCCTGACGGACGGCCTCGATGTTCTTGTATGCTTTTCTACT
GGCCCCATTCCGGCGGAGCTGCATCAACTGCAAAGGATGAAAGAAGTCGC
GAGGTCAAAGTTTCAACATTGGATGGTGGAAGGACATGGCTTTCGGGATC
GAGACAGAGCCAAGTGGCACTGAAAAGCAGCTACGACGTCCACTCAAGGA
TTGTCCTGTCCCTACTGGTGCCTACGGTTTCAATGTTCCCCCTGACTGCG
GCAGTGGCGCCGTCACTAAGCCACCTCCTCGGAGACGGCCCTGTAGTCTC
TGAGGAGGAAGTGACGAAGTCAACGTCTCCTTTTGGCAACAAAGTGGAAC
CTCTTATTGAAGTTTTCGAAGCCGTGCCAACCCGGTCACCTAGCGACGAC
GGCCGATCACCACAGGATTTCAACGCTATAATCGTTATCTCGAGGGCTGT
GCCGCGGCCTAAGGAGGTGGGTCGTATGATTTTGCTTCATTGGTGAGCTT
TCTTACGTGGAGGTGGAGTGGGAATTGATCATCCCAAGGTGTCCGTGCGG
CTAATTGTGAAGGGTGTCTCCTGCCGTCCCAAACGCAAAATGCGTCTGTG
AAGGTAGTTGTTATTTTCATAATCCGACCATCAACGGAGAACAATTGCTG
ACTTGTACCATCGGTTGCATGAGGTGCCCACAACTTCGTAACCAAATGTC
AAAGCTGTATAACTCGCCCATCAGGATGCTGCCGCTAACGGTGCATGTTG
GAAAATCTGCAGATGAGATGGTTGTGCACCATTTGTGTTGGCAAAGTGTA
AAGCTCTTGAGAATACGTTCGCGAGGTTTGTCCTTGCGGGGGAGCCGCCG
TTGTGTGGTCTGCAGAGCTTGTGATAACTCGTAGGTCCTGCCGCGAAATA
CTTCTCAAGGTGACCACGGTGGCGTGGGAACCAGGTTGTTTTAAGTGTAG
TTTGAGTGTGACGACTAGCACAAGTCGCGTAAATATCACACACACAAGGA
ACTCTTGCCTTGCACGCAACAACTCCATTACCTCATGTACGGTTCGTGCG
GTACGTCGCAGAGTGAGCAAAACGGTGGTAGGGAGTCATTCGCTCTCTGT
TCGGGCGAGTCTGACAACATCGTGTAGTCAGATGAAAGCGCCCAAGTCAG
AGATACAGAGTTCATCTCCAATATCCACAAAGCTGCTGCCATGTGACAAT
AGGCCATCGCCACATCTGACAAGATTCGCCGAGGAAGCTCGGCAACTTTG
AAATGGCAACTGGGTCCACTGCAGCAGTGCCAACATTACTGACATTGTGG
TCATTGGATCCTTAAGGCGAGTTGTTCTTCATCCGTCTGCACGAGGTTAG
ATACTTCGACAAGGAAATCCCAACCATCTTCATTCGTTTTATGTTTTTCT
GCAGAGAAACGAGCTATCATGTGTGATTGACGGTGGTCGAGTGCGGGCAG
TCTGGTTGTCGTGGAGTATGGTGCTCTGCAGGTGAGAGACGTGCCGTCTG
GTTCTTAGTTGGGGTGTCAAAAAGACAAGCGTCTAGTTTATTGCTTGAAC
GTGTTGCTACCGAGCGTGCTTTCAAGAACGCGCACTTTAGAGCACGCACG
CAATGGGTCGAAAATGCTTCAGCAGAGCCGAAGGCATAACGGAAGGGTCG
ATCCTTCCTTGGTTCAGAACATCTTGACCGCACATCAACATCTGCCACTC
GAAACAAGTTCCAGTTTATCTGCCACTCCAAACAATTCCCAGTTTGTTGA
CCGGAGAGTATTTCTCCGCTTCCCTTCTCCGCAGTACTGCACATGTACGA
GCGAACAGGGTCACCATATACATCGCATTTCAAGACAGGCGATTCAGCGA
AGATTTTGTTTTCCTGCATGCGCGTGCGCCCCGCCACGTGCGCCTGGGAT
GGCCAGCAACTGAATCATTCGATTCGACGATCCGTGGTCTTTCTTGGGAA
CCTGGTGGAGTTGAATCTGCAAATCCAGCGAAAGGCGGTGTGCCAGGTAG
CTCTGGCGAGAAGCTGTTACGTACTAATTTGGTCATTTGCACCATTTTCA
AGAACGAAGCAGCTTACTTGGAGGAGTGGTTGCAATACCATCAGCTACTT
GGAATTTCGAAGGCAAGTTTGAAGCGTAATCATCTCGTTGCCCGAACATT
TCGGTTGGTTTCTATTGGCGAATTTCGATTGAGATGTTGTAAATGTGAAT
CATTTCAACAGTTCCGAGACTATGGAAGCGCTTTCTTTTTCATCTATGAA
GTTATCGTGAAAGGAGAGTCGAAGCTTCGTTTCACATGTTCCATTTTAGC
CCTGAAACAAAGTGCATCCAACTGGCAGGGATCTCGTACCACCTTAATAA
GCACTCTGAACTAAAGCAATCTTCACTCCAAAGTGCCACAAATCGGGGGT
GACTGGTACGATAGGGGCAAAGACGCTGTGAACGTGGGTCTTACACAAAA
CTTGCTCCAAATCATCGCTTGCGCACAATCTTGAGAAACGAAAGTACGAG
TCAGCGCGAAGTCCCTCTCCAGACGTGAAAGATTGCAAATGTACGACAGC
ATCCCGGGCGAAAAGGTAGAGAAGGCCACGACGAACTTCCGCGACCACAG
CTATGATTGGGGTTCATATTTTGGTCCGATGAGGTCGTCTGAGTTCCCGC
GCTGCTGTCACGCTCCTAGTTTCATGGGCGCGTAGCGCTGCCTGTCTCAT
GTCTGCCTCTACTCTTAAAAATAAGCAGTTTTGTTTTTTGCCACCTCTCC
AGGTCAGCCCCCCGGGCTCGCTTGCGCTCCAAAACGAGTAGGGCTTTATA
CCAGGCGTCAAGTCCTGCTTACAGCTCGCGTTATCCGATTGCCACTTGCC
GTGGAAATTGTCTAGGTTCGCGCTTAAAAAGCTCCGCATTGGTTGCTCGT
CTTCCTTTCTTGTAAAAAAAACAAACCGCCACAGAGGTGGCGCAGCAACA
AGTTTTCTCTGAAAGCGGCCATACGCACCTGCTTTGCGATGGTTGAAGTC
ATAAAGAGATATATTATTTACCCCAAGATAGATATCTCGTGACACACAAG
CACACTGAGGTGATTACCCGGCGAAGTTTCGCTTGCCGAGTGAACGGCGA
AATGCTTGACTTGGATGATGTGGAGCATGCTGAATAATTGCTTCGTAGAG
CAGCAAGGTAAAAGGGGAAGGGAACCCCTACAGCGTGCGCACTCTCCTAC
TTGAAATACTTGATAATCACGTGCCATCTACCCTTCACCATGCCCAATGC
TTGTTCCGCTGCAGGTTTATCTCTACGACAATGGGTCGACTGACGAGTCC
AGGGATCTTTTGAGGAAATATGAACGATCAAACTTCGTCGAGGTTCGCGA
CTGGCCTTACAGAGGCGCGCAAACTCAGGCTCTGAATGACTGCCTTTGTC
GTTTTCGGCATTCAGCAAGGTTTGTTCCATGCTTGTCACTCAAACAACGT
ACGTGAAGCGTGAATCTTCATGTAGCCTTGTGTGCTCTGCCGGAATTTTT
GTTCTCAGTCGCCACTCTTGCTCGCCGAACAGGTGGATGTCATTCATTGA
TGTTGACGAGTTCATCGATCCTGCGCCAGATCTGCCGATATCGTCTGAAG
GAGAATCCGCTCAGGACGAAACCGTCCGCCTGGACGGTGGTCAAGTCCAC
TCCTTTGACAGCTTCATGTCGGCACGGCGAAAGTGAGAATGCGTACTCCA
GGGTCGTATGCCTTTGCCCAACTGTAGGCGTAGAGCCCGCTCGTACTTAC
GGGGACCCACAAGGTCGTAAAGCAACCGTCATCTTTTGAATATTTCAACC
GTTGAAAATTCCCGTTTTCTGGCAGACGGTTGCGATATTTATTGGAGGAG
TGGGCCCCGGAGCGGCATACACATTGTATGCCGTGGGTGAACTATTGCTC
C

Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7745:504..5204+

>mRNA_H-canaliculatus_M_contigs7745.1.1 ID=mRNA_H-canaliculatus_M_contigs7745.1.1|Name=mRNA_H-canaliculatus_M_contigs7745.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1044bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7745:504..5204+ (Hapterophycus canaliculatus Oshoro7m male)
ATGTTCCCCCTGACTGCGGCAGTGGCGCCGTCACTAAGCCACCTCCTCGG
AGACGGCCCTGTAGTCTCTGAGGAGGAAGTGACGAAGTCAACGTCTCCTT
TTGGCAACAAAGTGGAACCTCTTATTGAAGTTTTCGAAGCCGTGCCAACC
CGGTCACCTAGCGACGACGGCCGATCACCACAGGATTTCAACGCTATAAT
CGTTATCTCGAGGGCTGTGCCGCGGCCTAAGGAGAGAAACGAGCTATCAT
GTGTGATTGACGGTGGTCGAGTGCGGGCAGTCTGGTTGTCGTGGAGTATG
GTGCTCTGCAGTACTGCACATGTACGAGCGAACAGGGTCACCATATACAT
CGCATTTCAAGACAGGCGATTCAGCGAAGATTTTGTTTTCCTGCATGCGC
GTGCGCCCCGCCACGTGCGCCTGGGATGGCCAGCAACTGAATCATTCGAT
TCGACGATCCGTGGTCTTTCTTGGGAACCTGGTGGAGTTGAATCTGCAAA
TCCAGCGAAAGGCGGTGTGCCAGGTAGCTCTGGCGAGAAGCTGTTACGTA
CTAATTTGGTCATTTGCACCATTTTCAAGAACGAAGCAGCTTACTTGGAG
GAGTGGTTGCAATACCATCAGCTACTTGGAATTTCGAAGGCAAGTTTGAA
GCGTAATCATCTCGTTTATCTCTACGACAATGGGTCGACTGACGAGTCCA
GGGATCTTTTGAGGAAATATGAACGATCAAACTTCGTCGAGGTTCGCGAC
TGGCCTTACAGAGGCGCGCAAACTCAGGCTCTGAATGACTGCCTTTGTCG
TTTTCGGCATTCAGCAAGGTGGATGTCATTCATTGATGTTGACGAGTTCA
TCGATCCTGCGCCAGATCTGCCGATATCGTCTGAAGGAGAATCCGCTCAG
GACGAAACCGTCCGCCTGGACGGTGGTCAAGTCCACTCCTTTGACAGCTT
CATGTCGGCACGGCGAAAACGGTTGCGATATTTATTGGAGGAGTGGGCCC
CGGAGCGGCATACACATTGTATGCCGTGGGTGAACTATTGCTCC