mRNA_H-canaliculatus_M_contigs7741.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: G-patch_2 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L2_ECTSI) HSP 1 Score: 206 bits (525), Expect = 8.850e-60 Identity = 143/238 (60.08%), Postives = 155/238 (65.13%), Query Frame = 1
Query: 10 GGKRDYVTGIGGGKVVTKELVVERGPRVISLVSNPWAKGSSXXXXXXXXXXXXXXXXXXXXXXTLATPAARPAHEQPAAEN-----------------------------------------------------TGSRKKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKPP 564
GGKRDYVTGIGGGKVVTKE+VV+RGPRVI+L SNPWA GS+ XXXXXXXXXXXXX T PA + +Q AAE GS++ TGLLEQNMIPG+M+VDGEDAKF+HDLGHRAED SARSKAYVDVPVAEFGAALLRGMGW GPEG+GXXXXXXXX L DIEPRHHRLGLGAQPKPP
Sbjct: 58 GGKRDYVTGIGGGKVVTKEVVVDRGPRVIALASNPWANGSNAAAAAXXXXXXXXXXXXXRPP-TAEEPAGEKSLDQLAAEAIAKESVRGDGSSADAFGLGLDSDRVIGMIGKNPAAGEGDSSNGAATAKTTPDAAGSKRNTGLLEQNMIPGLMEVDGEDAKFRHDLGHRAEDFSARSKAYVDVPVAEFGAALLRGMGWKGPEGDGXXXXXXXXGPD-LSKDIEPRHHRLGLGAQPKPP 293
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: DExH-box (splicing factor binding site-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA3_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.340e-23 Identity = 61/114 (53.51%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 241 AAENTGSRKKTGLLEQNMIPGIMDVDGED-AKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGP-----EGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKPP 564
AAE +K G+LE MIPG+ +V G D AK KHDL RA D+ A+S Y VPV EFGAALLRGMGW GP EGN EPRHHRLGLGA PKPP
Sbjct: 56 AAEQAAGARKRGILEAAMIPGLNEVAGGDGAKLKHDLAIRAADIDAKSDVYRHVPVEEFGAALLRGMGWAGPAPEDKEGNANPL-----------GTAEPRHHRLGLGAAPKPP 158
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: Aste57867_21911 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.370e-22 Identity = 66/185 (35.68%), Postives = 85/185 (45.95%), Query Frame = 1
Query: 16 KRDYVTGIG-GGKVVTKELVVERGPRVISLVSNPWAKGSSXXXXXXXXXXXXXXXXXXXXXXTLATPAAR--PAHEQPAAENTGSRKKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKP 561
K+D V G G V K+ GP VI + W TL P A P++ +T S K+ LL +N IPG+ +V G+ KFKHDL R ++L S A+ VP+ EFGAALLRGMGWTG + A ++ RH+RLGLGA PKP
Sbjct: 35 KKDIVLGFSTSGDAVLKDPSAASGPLVIPCIKQNWTADEEAAEALLADIRASSSKAEDAEESTLVIPIAGGDTKTSDPSSSSTAS-KEAPLLSRNRIPGMENVAGDKNKFKHDLSMRPDELDIHSDAFDAVPIEEFGAALLRGMGWTGKD-----------RVEPTGAKVQMRHYRLGLGATPKP 207
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: G-patch_2 (domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I1_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.830e-20 Identity = 61/184 (33.15%), Postives = 85/184 (46.20%), Query Frame = 1
Query: 19 RDYVTGIG-GGKVVTKELVVERGPRVISLVSNPWAK-GSSXXXXXXXXXXXXXXXXXXXXXXTLATPAARPAHEQPAAENTGSRKKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKPP 564
+D V G G GK + K V P VI L+ W+K G+S + P + + K +L +N +PG + E+ KFKHD+ HR +D+ S+AY VP+ EFGAALLRGMGW+G + A + ++ RH RLGLGA P+PP
Sbjct: 33 KDIVLGFGTSGKALLKNPVAANAPLVIPLIEQNWSKQGASEADQEAAAALLADIQLTTGDETKYESSLVIPVDAK-------TEKDAPILFRNKVPGADGMTNENDKFKHDISHRPDDMDIHSEAYEAVPIEEFGAALLRGMGWSGKD-----------RVKATGSKVQMRHQRLGLGATPRPP 198
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: G-patch_2 (domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSD4_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 4.140e-20 Identity = 63/185 (34.05%), Postives = 82/185 (44.32%), Query Frame = 1
Query: 16 KRDYVTGIG-GGKVVTKELVVERGPRVISLVSNPWAKGSSXXXXXXXXXXXXXXXXXXXXXXTLATPAARPAHEQPAAENTGSR--KKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKP 561
K+D V G G V K+ V GP VI + W TL P A + +N + K LL +N IPG+ V G+ KFKHD+ R ++L S A+ VP+ EFGA LLRGMGWTG + A + ++ RH+RLGLGA PKP
Sbjct: 31 KKDIVVGFSTDGDAVLKDPSVANGPLVIPCIKENWGADQEAADALLADIRASSTKDPNAEGSTLVIPIA---NNDETRDNKKPKLDKDAPLLSRNRIPGMDKVVGDKDKFKHDVAMRPDELDIHSDAFEAVPIEEFGAGLLRGMGWTGKD-----------RIEATGSKVQMRHYRLGLGATPKP 201
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: G-patch_2 (domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMB8_SAPPC) HSP 1 Score: 92.0 bits (227), Expect = 3.340e-19 Identity = 61/190 (32.11%), Postives = 88/190 (46.32%), Query Frame = 1
Query: 1 AAGGGKRDYVTGIG-GGKVVTKELVVERGPRVISLVSNPWA-KGSSXXXXXXXXXXXXXXXXXXXXXXTLATPAARPAHEQPAAENTGSRKKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKPP 564
AA +D V G G GK + K+ V + VI L+ W KG++ + P ++PA + +L +N +PG+ ++ E+ KFKHD+ R +D+ S AY VP+ EFGAALLRGMGW+G + + ++ RH RLGLGA PKPP
Sbjct: 29 AAAPASKDLVLGFGTSGKALLKDPVAAKAKLVIPLIEQTWTEKGATEADSAAAEALLADIRSSAMGESAEDSTMVIPVAKKPAVGDDAP-----ILFRNKLPGLENLTNENDKFKHDISMRPDDMDIHSDAYEAVPIEEFGAALLRGMGWSGKD-----------RVQPTGSKVQMRHQRLGLGATPKPP 202
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXE9_HETAK) HSP 1 Score: 90.1 bits (222), Expect = 4.180e-19 Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 241 AAENTGSRKKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGP-EGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKP 561
AA K L N IPG+ ++ + +F D+G RAED+ +S+AY VPV EFGAA+LRGMGW GP EG+G A + PRH RLGLGA+PKP
Sbjct: 102 AAAEAARDKSLPTLIANAIPGLKEIADDQERFLKDVGMRAEDMDFKSEAYRAVPVEEFGAAMLRGMGWAGPPEGDGEP---------AEEEPLAPRHFRLGLGAEPKP 200
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: G-patch_2 (domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW8_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.120e-18 Identity = 67/188 (35.64%), Postives = 89/188 (47.34%), Query Frame = 1
Query: 19 RDYVTGIGG-GKVVTKELVVERGPRVISLVSNPWA-KGSSXXXXXXXXXXXXXXXXXXXXXXTLATPAARPAHEQ----PAAENTGSRKKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKPP 564
+D V G GK + K+ V + VI L+ WA KG+S AT A A E P A+ + T +L +N +PGI ++ E+ KFKHD+ R +D+ S AY VP+ EFGAALLRGMGWTG + + ++ RH RLGLGA PKPP
Sbjct: 34 KDIVLGFASTGKALLKDPVAAKAQLVIPLIEQNWAEKGASEADSAAATALLADIR---------ATTAGDTAEESTLVIPVAKVIKAND-TPILFRNKLPGIENLANENDKFKHDISLRPDDMDIHSDAYEAVPIEEFGAALLRGMGWTGKD-----------RVQPTGSKVQMRHQRLGLGATPKPP 200
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.170e-18 Identity = 46/93 (49.46%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 277 LLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQP 555
LL Q M+PG+ +++ EDAKFKHDL +RAEDL A+ +AY + + +FGAA+LRGMGWTGP RHHRLGLGA P
Sbjct: 50 LLLQGMVPGLNEIESEDAKFKHDLRYRAEDLGAKDEAYQRIKIDDFGAAMLRGMGWTGPTKEEEELHKKQHGA---------RHHRLGLGAAP 133
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Match: G-patch_2 (domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHW1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.410e-18 Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 247 ENTG--SRKKTGLLEQNMIPGIMDVDGEDAKFKHDLGHRAEDLSARSKAYVDVPVAEFGAALLRGMGWTGPEGNGXXXXXXXXXXSALPADIEPRHHRLGLGAQPKP 561
ENT ++K +L +N IPG+ + GE KFKHDL R ++L S A+ VP+ EFGAALLRGMGWTG + + ++ RH+RLGLGA PKP
Sbjct: 116 ENTSDINKKDAPMLTRNRIPGMDKIVGETNKFKHDLSMRPDELDIHSDAFDAVPIEEFGAALLRGMGWTGKD-----------RVEPTGSKVQMRHYRLGLGATPKP 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7741.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7741.1.1 >prot_H-canaliculatus_M_contigs7741.1.1 ID=prot_H-canaliculatus_M_contigs7741.1.1|Name=mRNA_H-canaliculatus_M_contigs7741.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=188bp AAGGGKRDYVTGIGGGKVVTKELVVERGPRVISLVSNPWAKGSSSSSSSNback to top mRNA from alignment at H-canaliculatus_M_contigs7741:1520..2293+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7741.1.1 ID=mRNA_H-canaliculatus_M_contigs7741.1.1|Name=mRNA_H-canaliculatus_M_contigs7741.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=774bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7741:1520..2293+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7741:1520..2293+ >mRNA_H-canaliculatus_M_contigs7741.1.1 ID=mRNA_H-canaliculatus_M_contigs7741.1.1|Name=mRNA_H-canaliculatus_M_contigs7741.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=564bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7741:1520..2293+ (Hapterophycus canaliculatus Oshoro7m male)back to top |