mRNA_H-canaliculatus_M_contigs77356.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: ABC (transporter substrate-binding protein n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A3D2FBX6_9RHOB) HSP 1 Score: 261 bits (666), Expect = 1.860e-84 Identity = 117/170 (68.82%), Postives = 135/170 (79.41%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQKAPDPTPLQQADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
+V VG L IPCP GSV DPTPLQQ DAELTLVT SNYAPFTD WPG+GMVTELVNAA EE+P P+ +AIVWED+WS+HL+PML+EK VDMGFPW+RP+CE NP RC NFHFSDPL+DLV+L F TD MRFE D+DV GK +CRP G+ T+DLD RNWL+
Sbjct: 66 DVAVGKELVIPCPAGSVVVEADPTPLQQVDAELTLVTGSNYAPFTDRGWPGNGMVTELVNAAFEETPEPVTFAIVWEDDWSQHLNPMLEEKVVDMGFPWYRPNCEANPSQYRCANFHFSDPLLDLVMLFFVNTDNPMRFETDNDVFGKNICRPKGFLTYDLDQDGRNWLA 235
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: transporter (substrate-binding domain-containing protein n=1 Tax=Tateyamaria omphalii TaxID=299262 RepID=UPI0016766E4E) HSP 1 Score: 258 bits (659), Expect = 2.650e-83 Identity = 121/178 (67.98%), Postives = 140/178 (78.65%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQ-KAP------DPTPLQQAD-AELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
++P GTVL IPCPEG+ Q +AP DP PLQQ D AE+ LVTASNYAPFTD +WPG GM+TELVNAA EE+P+P+ Y+I WE++WSKHL PMLD K+ DMGFPWF+PDC NP + RC NFHFS+PLVDLVILLFAR D F D+D+ GKTLCRPAGYFTHDLD DR WLS
Sbjct: 65 DLPAGTVLTIPCPEGAAQPQAPAPTVQADPKPLQQKDEAEIKLVTASNYAPFTDLDWPGQGMLTELVNAAFEETPNPLTYSIEWENDWSKHLFPMLDSKEFDMGFPWFKPDCAGNPSNERCANFHFSEPLVDLVILLFARADDRFTFAQDADLHGKTLCRPAGYFTHDLDRADRRWLS 242
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: transporter (substrate-binding domain-containing protein n=1 Tax=Shimia sp. WX04 TaxID=2582893 RepID=UPI0011BDAA0C) HSP 1 Score: 249 bits (636), Expect = 7.310e-80 Identity = 108/170 (63.53%), Postives = 131/170 (77.06%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQKAPDPTPLQQADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
++P GTVL +PCP + TPLQ DAE+ L+T SNYAPFTD WPG GM+TELVNAA+EE+PSP+ Y+I WED+WSKHL PMLD K+ DMGFPWFRPDCEN P + RCVNFHFSDP+V+L+ LLF + F+ DSD+ GKTLCRPAGYFT DLD+ +R WL+
Sbjct: 71 QIPAGTVLTVPCPLDGSDFVAEATPLQVEDAEMMLITGSNYAPFTDRAWPGQGMITELVNAAMEETPSPVTYSITWEDDWSKHLFPMLDSKEFDMGFPWFRPDCENTPGNERCVNFHFSDPIVELLQLLFVANGSDLTFDQDSDLFGKTLCRPAGYFTFDLDSAERQWLT 240
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: Transporter (substrate-binding domain-containing protein n=1 Tax=Pseudohalocynthiibacter aestuariivivens TaxID=1591409 RepID=A0A6G6FKA4_9RHOB) HSP 1 Score: 248 bits (632), Expect = 2.530e-79 Identity = 111/171 (64.91%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQKAPDPTPLQQ-ADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
+VP G + IPCP GSVQ PDPTPL+Q ++AE+TL+T NY+PFTD NWPG+GMVTELVNAALE +P+P+PYAI WED+WSKHL P+LD+K DMGFPW RPDC+ P++ RC NFHFS PL+DL I+LF + + D+DVIG++LCRPAGYFTHDLD DR WLS
Sbjct: 67 DVPPGADIFIPCPAGSVQ--PDPTPLRQDSNAEMTLLTGGNYSPFTDRNWPGNGMVTELVNAALEMTPAPVPYAITWEDDWSKHLFPLLDDKVHDMGFPWLRPDCDATPENERCANFHFSAPLMDLPIMLFVAAGSNFNYSGDADVIGRSLCRPAGYFTHDLDRADRRWLS 235
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: ABC (transporter substrate-binding protein n=1 Tax=Roseovarius sp. TE539 TaxID=2249812 RepID=A0A365U248_9RHOB) HSP 1 Score: 242 bits (617), Expect = 5.630e-77 Identity = 108/170 (63.53%), Postives = 130/170 (76.47%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQKAPDPTPLQQADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
E+ G + +PCP G V APD TPL+QADA++TL+T SNY+PFTD WPG GMV ELVNAALE SPSP+PY+I WED+WS+HL PMLD K+ DMGFPW RPDCE P RC FHFSDPL++L ++LF R +E+D+D+ G+TLCRPAGYFTHDLD DR WLS
Sbjct: 74 ELEPGREVYVPCPAGDV--APDATPLRQADAQMTLLTGSNYSPFTDRAWPGRGMVIELVNAALELSPSPVPYSIGWEDDWSRHLFPMLDGKEYDMGFPWLRPDCEATPDDERCAGFHFSDPLMELPVMLFTRAASDFTYESDADIPGRTLCRPAGYFTHDLDRDDRRWLS 241
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: ABC (transporter substrate-binding protein n=1 Tax=Pelagicola sp. LXJ1103 TaxID=2175247 RepID=A0A2U2CZL7_9RHOB) HSP 1 Score: 239 bits (611), Expect = 3.380e-76 Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQKAPDPTPLQQADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
+V G + +PCP G + APD TPL Q DAE+TL+T NYAPFTD WPG+G+VTELVNAALE +P P+PYAI WED WS+ L P+LDEK DMGFPW RPDCE P + C +FHFS+PL+DL I+LF R +G M + +D+DV+GKTLCRP G+FTHDLD DR WLS
Sbjct: 64 DVAPGAQVYVPCPAGEI--APDDTPLLQPDAEMTLLTGGNYAPFTDQTWPGNGLVTELVNAALEMTPEPVPYAITWEDQWSQDLLPLLDEKTHDMGFPWQRPDCEGTPDDALCASFHFSEPLIDLPIMLFVRAEGGMVYASDADVVGKTLCRPKGFFTHDLDRADRRWLS 231
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: transporter (substrate-binding domain-containing protein n=1 Tax=Roseobacteraceae TaxID=2854170 RepID=UPI001C443050) HSP 1 Score: 239 bits (611), Expect = 4.970e-76 Identity = 107/150 (71.33%), Postives = 123/150 (82.00%), Query Frame = 1
Query: 64 DPTPLQQ-ADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
DP PLQQ +AE+ LVTASNYAPFTD +WPG GM+TELVNAA E +P+P+ Y+I WE++WSKHL PMLD K+ DMGFPWF+PDC NP + RC NFHFSDPLVDLVILLFAR+D F+ DSD+ GKTLCRPAGYFTHDLD DR WLS
Sbjct: 94 DPKPLQQDTEAEIRLVTASNYAPFTDLSWPGQGMLTELVNAAFEATPNPLTYSIEWENDWSKHLFPMLDSKEFDMGFPWFKPDCAGNPSNERCANFHFSDPLVDLVILLFARSDNPFNFDQDSDLHGKTLCRPAGYFTHDLDRADRRWLS 243
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: Amino (acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A239B6C1_9RHOB) HSP 1 Score: 237 bits (605), Expect = 4.250e-75 Identity = 105/172 (61.05%), Postives = 130/172 (75.58%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQKAPDPTPLQQA--DAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
+V G VLD+PC EG V+ D TPL+Q +AE+ L+T SNYAPFTD WPG GMVTELVNAALE +PSP+ Y+I W+D+WSKHL P+LD K+ DMGFPW +P+C P + RC NFHFSDPLV++++LLF R D ++ D+DVIGK LCRP GYFTHDLD P R WL+
Sbjct: 75 QVSPGDVLDLPCQEGEVRA--DATPLRQGPDNAEMKLITGSNYAPFTDREWPGQGMVTELVNAALEATPSPVTYSITWQDDWSKHLFPILDSKEADMGFPWLKPNCAQTPDNERCANFHFSDPLVEILVLLFTRPDSGFVYDTDADVIGKVLCRPKGYFTHDLDRPGREWLN 244
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: transporter (substrate-binding domain-containing protein n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF4C239) HSP 1 Score: 236 bits (603), Expect = 7.360e-75 Identity = 106/170 (62.35%), Postives = 127/170 (74.71%), Query Frame = 1
Query: 1 EVPVGTVLDIPCPEGSVQKAPDPTPLQQADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
+V G VL IPC GS Q D TPL+ +AEL L+T SNYAPFTD WPG GMVTELVNAA+E +P+P+ Y+I WED+WSKHL P LD K+ DMGFPW +PDC+ P RC NFHFSDPLV+++ILLF R +E+D+D++GK LCRP GYFTHDLD PDR WLS
Sbjct: 72 QVAPGDVLKIPCEPGSQQA--DATPLRVDNAELKLLTGSNYAPFTDREWPGQGMVTELVNAAMEATPAPVTYSIDWEDDWSKHLFPKLDAKEFDMGFPWLKPDCDQTPDDERCANFHFSDPLVEILILLFVREGSGFTYESDADILGKRLCRPKGYFTHDLDRPDRQWLS 239
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Match: ABC (transporter substrate-binding protein n=3 Tax=Tateyamaria TaxID=299261 RepID=A0A0B4CFR6_9RHOB) HSP 1 Score: 233 bits (594), Expect = 1.840e-73 Identity = 102/144 (70.83%), Postives = 118/144 (81.94%), Query Frame = 1
Query: 79 QQADAELTLVTASNYAPFTDWNWPGHGMVTELVNAALEESPSPIPYAIVWEDNWSKHLSPMLDEKQVDMGFPWFRPDCENNPQHSRCVNFHFSDPLVDLVILLFARTDGSMRFEADSDVIGKTLCRPAGYFTHDLDTPDRNWLS 510
Q+A+AE+ LVTASNYAPFTD +WPG GM+TELVNAA E +P+P+ Y+I WE++WSKHL PMLD K+ DMGFPWF+PDC NP + RC NFHFSDPLVDLVILLFA D F+ DSD+ GKTLCRPAGYFTHDLD DR WLS
Sbjct: 100 QEAEAEIKLVTASNYAPFTDLDWPGQGMLTELVNAAFEATPNPLTYSIEWENDWSKHLFPMLDSKEFDMGFPWFKPDCAGNPSNERCANFHFSDPLVDLVILLFAHGDNPFTFDQDSDLHGKTLCRPAGYFTHDLDRSDRRWLS 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77356.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs77356.1.1 >prot_H-canaliculatus_M_contigs77356.1.1 ID=prot_H-canaliculatus_M_contigs77356.1.1|Name=mRNA_H-canaliculatus_M_contigs77356.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=170bp EVPVGTVLDIPCPEGSVQKAPDPTPLQQADAELTLVTASNYAPFTDWNWPback to top mRNA from alignment at H-canaliculatus_M_contigs77356:3..512- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs77356.1.1 ID=mRNA_H-canaliculatus_M_contigs77356.1.1|Name=mRNA_H-canaliculatus_M_contigs77356.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=510bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77356:3..512- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77356:3..512- >mRNA_H-canaliculatus_M_contigs77356.1.1 ID=mRNA_H-canaliculatus_M_contigs77356.1.1|Name=mRNA_H-canaliculatus_M_contigs77356.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=510bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77356:3..512- (Hapterophycus canaliculatus Oshoro7m male)back to top |