mRNA_H-canaliculatus_M_contigs77151.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77151.1.1 vs.
Match: Peptidase (M12B domain-containing protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848U6V4_9GAMM) HSP 1 Score: 244 bits (624), Expect = 7.550e-74 Identity = 126/169 (74.56%), Postives = 144/169 (85.21%), Query Frame = 1
Query: 7 QTRIAVLHESADAGDSLPVFLNALSLRDDGRIEQALAELDVIAKAYPAGALTDDALYISAYLQVMDRYDFAAARVALNTLQQRFPESAYSDSAQYLDAIAMEQLGDTQGARQALIELRDRHTALSLPLDFRWPAGSVLSRYWFDRAHRRLAIVEERIAGACTVSTQEQR 513
QTRIAVL ESADAG SLPVFL ALSLRD G +++AL L IA A PAG+LTDDALYISAYL VMDRYDFAAAR AL+TL QRFP+SAYSDSAQYLDAIA+EQLGDT AR L+ LRDRHTAL+LPL+FRWP GSVLSRYWFDRA RRLAIVE+R+A A + +++++
Sbjct: 86 QTRIAVLQESADAGQSLPVFLKALSLRDAGEMDKALLALGTIASADPAGSLTDDALYISAYLLVMDRYDFAAARKALHTLDQRFPDSAYSDSAQYLDAIALEQLGDTLAARDQLMRLRDRHTALNLPLEFRWPRGSVLSRYWFDRADRRLAIVEQRLASASRLDSRQRQ 254
BLAST of mRNA_H-canaliculatus_M_contigs77151.1.1 vs.
Match: Outer (membrane protein assembly factor BamD n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2P5E2_9GAMM) HSP 1 Score: 237 bits (604), Expect = 1.190e-70 Identity = 122/169 (72.19%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 7 QTRIAVLHESADAGDSLPVFLNALSLRDDGRIEQALAELDVIAKAYPAGALTDDALYISAYLQVMDRYDFAAARVALNTLQQRFPESAYSDSAQYLDAIAMEQLGDTQGARQALIELRDRHTALSLPLDFRWPAGSVLSRYWFDRAHRRLAIVEERIAGACTVSTQEQR 513
QTRIAVL ES+DAG SLPVFL ALSLRD G +E AL LD IA A PAG LTDDALYISAYLQVMDRYDF +AR L L+QRFP+SAYSDSA YLDAIA+EQLG+TQ AR+ L+ELR RHTAL LP++FRWP GSVLSRYWFDRA RRLAIV++R+A A + + E++
Sbjct: 83 QTRIAVLQESSDAGQSLPVFLRALSLRDAGDMEAALQALDTIASADPAGTLTDDALYISAYLQVMDRYDFKSARSVLAILEQRFPDSAYSDSAYYLDAIALEQLGETQQAREKLVELRARHTALDLPMNFRWPRGSVLSRYWFDRADRRLAIVDQRLASASQLGSVEEQ 251
BLAST of mRNA_H-canaliculatus_M_contigs77151.1.1 vs.
Match: Peptidase (M12B domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2G6ENC8_9GAMM) HSP 1 Score: 186 bits (473), Expect = 5.210e-52 Identity = 96/166 (57.83%), Postives = 123/166 (74.10%), Query Frame = 1
Query: 7 QTRIAVLHESADAGDSLPVFLNALSLRDDGRIEQALAELDVIAKAYPAGALTDDALYISAYLQVMDRYDFAAARVALNTLQQRFPESAYSDSAQYLDAIAMEQLGDTQGARQALIELRDRHTALSLPLDFRWPAGSVLSRYWFDRAHRRLAIVEERIAGACTVSTQ 504
QTRIAVLHE+ DAGD L FL AL RDDG + +L+ LD +A G L DDALY+ AYLQ+M+ +DF AR L L++RFP++AY+DSA YL AIA+EQ G+T+ AR+ L +LR RHT+LSLPL FRWP G+ LSRYWFDRA RR+ I++ER+A A V ++
Sbjct: 88 QTRIAVLHEARDAGDDLEPFLAALDARDDGDWQASLSLLDELAADDAGGVLVDDALYLRAYLQLMELHDFPGARDTLVELRRRFPDTAYADSADYLAAIALEQSGETRAARRMLDDLRHRHTSLSLPLGFRWPRGTALSRYWFDRADRRIDIIDERLATAGRVKSE 253
BLAST of mRNA_H-canaliculatus_M_contigs77151.1.1 vs.
Match: ASH (domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A357I6Z5_9GAMM) HSP 1 Score: 114 bits (285), Expect = 2.280e-27 Identity = 64/158 (40.51%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 4 AQTRIAVLHESADAGDS--LPVFLNALSLRDDGRIEQALAELDVIAKAYPAGALTDDALYISAYLQVMDRYDFAAARVALNTLQQRFPESAYSDSAQYLDAIAMEQLGDTQGARQALIELRDRHTALSLPL-DFRWPAGSVLSRYWFDRAHRRLAIVE 468
A R+ VL ES+ GDS + + AL+ RD GR E A+ +LD + AG + DDALY+ Y+ + D + A + L+ RFPES+Y D+A Y++AIA +++GD AR+ ELR RHT LS+ + + WP + LSR WF+R + LA ++
Sbjct: 188 ASVRVPVLTESSRQGDSGVMHHYTRALAFRDIGRSEDAIQDLDTLLDQDDAGYMADDALYLKGYIYLADLKAYQDAYDTMLELRFRFPESSYYDTALYVEAIAQQEMGDVDLARELFDELRRRHTGLSIEMFNLEWPKDNYLSRLWFERGSQALAALD 345
BLAST of mRNA_H-canaliculatus_M_contigs77151.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Granulosicoccus TaxID=437504 RepID=A0A2Z2NSE7_9GAMM) HSP 1 Score: 79.3 bits (194), Expect = 2.300e-14 Identity = 45/137 (32.85%), Postives = 69/137 (50.36%), Query Frame = 1
Query: 46 GDSLPVFLNALSLRDDGRIEQALAELDVIAKAYPAGALTDDALYISAYLQVMDRYDFAAARVALNTLQQRFPESAYSDSAQYLDAIAMEQLGDTQGARQALIELRDRHTALSLPLDFRWPAGSVLSRYWFDRAHRRL 456
GD ++L+AL +RD+G +E A +LDV+ +P G L DDALY+ Y+Q+M +AIA +Q+G+ AR+ ++LR RHT + L +++SR WFDRA+ L
Sbjct: 206 GDDFDLYLSALDMRDEGDLEGASMQLDVVHTLFPDGYLADDALYLQGYIQLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEAIAQQQIGNDSVAREIFLDLRYRHTGIDT-LGITMAKDNLVSRLWFDRANSAL 341
BLAST of mRNA_H-canaliculatus_M_contigs77151.1.1 vs.
Match: Outer (membrane protein assembly factor BamD (Fragment) n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M2GKL3_9BACT) HSP 1 Score: 70.1 bits (170), Expect = 3.420e-11 Identity = 45/147 (30.61%), Postives = 72/147 (48.98%), Query Frame = 1
Query: 43 AGDSLPVFLNALSLRDDGRIEQALAELDVIAKAYPAGALTDDALYISAYLQVMDRYDFAAARVALNTLQQRFPESAYSDSAQYLDAIAMEQLGDTQGARQALIELRDRHTALSLPL-DFRWPAGSVLSRYWFDRAHRRLAIVEERIA 480
A L FL AL+LR+ G+ +A+A D + + +P L DDA ++ A++ + D+A Y IA+E++G AR+ L+DRHTA+ LPL +P + SR WF +A ++L ++ R A
Sbjct: 126 AAPVLRPFLKALNLRERGKFAEAIAVCDSLIENFPRSYLADDARHLIAFIYLTXXXXXXXXXXXXXXXXXXXXXXXXXDNAYYGLGIALEKMGQFDRARKMFQTLKDRHTAIKLPLGQVSFPRDNYFSRLWFRKAEQQLEMLAVRRA 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77151.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs77151.1.1 >prot_H-canaliculatus_M_contigs77151.1.1 ID=prot_H-canaliculatus_M_contigs77151.1.1|Name=mRNA_H-canaliculatus_M_contigs77151.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=171bp AAQTRIAVLHESADAGDSLPVFLNALSLRDDGRIEQALAELDVIAKAYPAback to top mRNA from alignment at H-canaliculatus_M_contigs77151:4..516- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs77151.1.1 ID=mRNA_H-canaliculatus_M_contigs77151.1.1|Name=mRNA_H-canaliculatus_M_contigs77151.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=513bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77151:4..516- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs77151:4..516- >mRNA_H-canaliculatus_M_contigs77151.1.1 ID=mRNA_H-canaliculatus_M_contigs77151.1.1|Name=mRNA_H-canaliculatus_M_contigs77151.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=513bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs77151:4..516- (Hapterophycus canaliculatus Oshoro7m male)back to top |