mRNA_H-canaliculatus_M_contigs771.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs771.1.1
Unique NamemRNA_H-canaliculatus_M_contigs771.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY1_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 5.930e-131
Identity = 194/257 (75.49%), Postives = 226/257 (87.94%), Query Frame = 1
Query:   19 LSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSVA 789
            L+AS AI+ S    ASSRLDVIDLP GF+PEGITNGEGWTA+VGSL  GNIWKGDLETG+G+V EL APGPAVGLD+DRRS YLFVAGGPVGTARVYDE F LVADLAL++ G+S+FVNDVIITKTAAFFTDSFQ K+YKV+LDR +GALV G   VHT++LS+NVPV+EGAFN NG+EA DDGS L++VN  SQQL+ +DPDTG A L+DLGGELLPG  GDGLVLRKNTLW+VDN++EQ++EVSL+ADL+CGS+A
Sbjct:    8 LAASWAIIAS---EASSRLDVIDLPTGFFPEGITNGEGWTAFVGSLLNGNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSDYLFVAGGPVGTARVYDEDFALVADLALSD-GNSSFVNDVIITKTAAFFTDSFQPKIYKVNLDRETGALVDGLA-VHTLVLSDNVPVLEGAFNVNGIEATDDGSALVIVNMESQQLFAVDPDTGAATLIDLGGELLPGR-GDGLVLRKNTLWVVDNALEQILEVSLAADLSCGSLA 258          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ69_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 3.290e-109
Identity = 173/263 (65.78%), Postives = 204/263 (77.57%), Query Frame = 1
Query:    1 MKLSGFLSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSVA 789
            M++SG L A+L  +     SASSRLDVIDLP GF PEGIT+G GWTA+VGSL  GNIWKGDL+TGEG+VMEL APGPA GL +DRRSGYLFVAG   GT RVYDE F LVADL   + G S  +NDV++TK AAF+TDSFQ  +YKV+LDR +GALV G     T++L +N P VE A N NG+E  DDGS LIVVNS SQQ+Y +DPDTG A ++DLGG++L G  GDGLVLRKNTLW+ DN +EQ+ EVSLSADL+CGSVA
Sbjct:   23 MRVSGGLLATLVTV----TSASSRLDVIDLPTGFSPEGITSGGGWTAFVGSLVDGNIWKGDLKTGEGEVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLDFGDVGTS-IINDVVVTKGAAFYTDSFQPHIYKVNLDRETGALVDGSS-FETLVLGDNFPFVEEAINLNGIEVTDDGSALIVVNSESQQVYAVDPDTGDATVIDLGGDVL-GPRGDGLVLRKNTLWVSDNVLEQIYEVSLSADLSCGSVA 278          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZGA0_9CHLR)

HSP 1 Score: 213 bits (541), Expect = 1.470e-64
Identity = 127/260 (48.85%), Postives = 164/260 (63.08%), Query Frame = 1
Query:   13 GFLSASLAILGSAFVSASSRL-DVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPG-PAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
            G +  +L  L  A  +A+ R  +VI LPNGF PEGI  GEG TAY GSL  G+I+  DL TG G+++ L  PG PAVGLD+DRR+GYLFV+GGP G  R+Y+ H G   DL  + +    FVNDVI+T  AA+FTDSF   +YKVDLD       G  G   T+ LS +   V G FNTNG+ A  +G+ LI+V+S   +LY +DP TG A L+DLGGE +    GDGLVL    L++V NS+ Q+ E  LS + T  S+
Sbjct:   10 GLILLTLLTLAVASPAAAQRYPEVIPLPNGFQPEGIVVGEGNTAYAGSLADGDIYTVDLSTGAGEIL-LEGPGTPAVGLDFDRRTGYLFVSGGPNGDGRIYNTHTG---DLVTSYDFAGGFVNDVIVTPHAAYFTDSFMPVLYKVDLDDS-----GTPGADSTLSLSGDFVFVPGGFNTNGIVATPNGNALIIVHSSRGELYKVDPQTGEATLIDLGGENVNS--GDGLVLVARKLFVVQNSLNQIAEFHLSRNYTAASL 258          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A643JWK0_9EURY)

HSP 1 Score: 197 bits (502), Expect = 1.560e-58
Identity = 121/256 (47.27%), Postives = 156/256 (60.94%), Query Frame = 1
Query:   25 ASLAILGSAFVSASSRLD-VIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFG-LVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
            A LA++G+   +A S    VI LP GF PEGI  G G   +VGSL  G I++GDL TG G V      GPAVGL +D RS YLFVAGGP G A VYD   G LVAD  L    DS FVNDV++T+TAA+FTDS +  +Y++ L   +G  V  +  V  I LS +   V G FN NG++A  +G  LIVVN+ +  LY +DP +G A  +DLGGE +    GDG++L   TL++V N + Q+  V+L  D T G V
Sbjct:   25 AGLAVVGTGTAAAKSAFPAVIPLPIGFQPEGIVTGLGTDFFVGSLAGGAIYRGDLRTGSGDVFVPPTGGPAVGLSHDARSNYLFVAGGPTGRASVYDADTGALVADYELQ---DSQFVNDVVVTRTAAYFTDSARPSLYRIPLG--AGGDVPNQSAVEEIPLSGDFTSVAG-FNANGIDAPPNGKYLIVVNTSTGLLYKVDPASGDATEIDLGGETVTA--GDGILLAGRTLYVVRNQLNQIAVVTLDPDATAGEV 272          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5S5I5_9CHLR)

HSP 1 Score: 195 bits (496), Expect = 1.170e-57
Identity = 113/245 (46.12%), Postives = 154/245 (62.86%), Query Frame = 1
Query:   76 DVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPG-PAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGL-VADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPV------VEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
            +VI LPNGF PEGI +G G T YVGS+ TG +++GD+ +GEG+V+  +  G  A+GL YD RSG LFV+GG  G A VYD   G  VA++ L+     +F+NDV+ITK AA+FT+SFQ   Y+V L RH        GG+     SE VP+      +  AFN+NG+ A  +G  LI+VNS    LY +DP TG A  +DLGG  +P   GDGL+L+  TL++V N + Q+  + L +D T GS+
Sbjct:   36 EVIPLPNGFQPEGIASGRGNTFYVGSIPTGAVYRGDVRSGEGEVLVPAQEGRSAIGLKYDSRSGLLFVSGGNTGFAYVYDGKTGANVAEIQLSTT--PSFINDVVITKDAAYFTNSFQPVFYRVSLARH--------GGLPPAPTSEEVPLGGDFQFIPDAFNSNGIAATPNGKALIIVNSSEGALYKVDPATGDAKRIDLGGGSVPN--GDGLLLQGKTLYVVQNQLNQIAVIRLKSDFTSGSI 268          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=3 Tax=Haloferacaceae TaxID=1644056 RepID=A0A6A8G917_9EURY)

HSP 1 Score: 195 bits (495), Expect = 1.180e-57
Identity = 122/255 (47.84%), Postives = 156/255 (61.18%), Query Frame = 1
Query:   31 LAILGSAFVSASSRL-DVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGP-AVGLDYDRRSGYLFVAGGPVGTARVYDEHFG-LVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
            LA++GS   SA++    VI LP GF PEGI  G G   +VGSL  G I++GDL TG G+V      G  AVGL +D RS YLFVAGGP G A VYD + G LVAD  L  +G  TFVNDV++T+TAA+FTDSF+  +Y+V L   +G  V  +  V  I LS +   V G FN NG++A  +G  LIVVNS +  LY +DP TG A  +DLGG  L    GDG++L   TL++V N +  +  V L  + T G V
Sbjct:   10 LAVVGSGSASAAAAYPSVIPLPTGFRPEGIVTGLGNEFFVGSLAAGAIYRGDLRTGSGEVFVPPVEGGVAVGLSHDARSNYLFVAGGPTGQASVYDANTGALVADYGL--QGPPTFVNDVVVTRTAAYFTDSFRPALYRVPLG--AGGDVPDQSAVEEIPLSGDFTSV-GGFNANGIDAPPNGEYLIVVNSSTGLLYKVDPATGDATEIDLGGASLTA--GDGILLEGRTLYVVRNQLNLIAVVQLDPEATAGEV 257          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 3.450e-57
Identity = 123/270 (45.56%), Postives = 166/270 (61.48%), Query Frame = 1
Query:   34 AILGSAFVSA--SSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGP-AVGLDYDRRSGYLFVAGGPVGTARVYD--EHFGLVADLALAEEGDSTFVNDVIITKTA--AFFTDSFQRKMYKVDLDRHSGALVGGEGGV-HTIMLSENVP------VVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSI-----EQVIEVSLSADLTCGSV 786
            ++L  A V A  + RLD+IDLP GF PEG+T G G   YV +   G+IWKGDLETG G V+     G  A+G+D+DRRS YL+V G   G+  +YD  + F LVA++ L   G S  VNDVII   +  A+ T+S Q + Y++ LD + G L  G   V   I LS +        + + A N+NG+   DD S LI+VN  S +L+ +DPDTG A L+DLGG+L+   GGDGLVLRKNTLW+  N +     + V+EV LS DL+CG++
Sbjct:    6 SLLSLAIVPAVLAGRLDLIDLPVGFQPEGVTLGHGQEVYVSAFTGGSIWKGDLETGVGSVVIEGGNGTTALGIDFDRRSDYLWVCGAFSGSLAIYDTTDDFSLVAEIQLGTVGAS-LVNDVIIHPRSEYAYITESSQLQFYRIALDEY-GRLPNGPNTVAEVIPLSSDFSFQPGEIIADQALNSNGIVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLI--LGGDGLVLRKNTLWVCQNRLFGTPDQGVVEVLLSEDLSCGTI 271          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Superoxide (dismutase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UU31_9CHLR)

HSP 1 Score: 189 bits (480), Expect = 2.220e-55
Identity = 112/261 (42.91%), Postives = 163/261 (62.45%), Query Frame = 1
Query:   28 SLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPG-PAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGL-VADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPV------VEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIEVSLSADLTCGSV 786
            SL ++G+A  S  +  +VI LPNGF PEGI +G+G T YVGS+ TG +++GDL +GEG+V+  +  G  A+GL YD RSG LFV+GG  G A  YD   G  VA++ L+     +F+NDV+ITK AA+FT+SFQ  +++V L +        +GG+     SE +P+        GAFN NG+ A  +G  LI+VNS    LY +DP TG A  +DLGG  +P   GDGL+L+  TL++V N + ++  + L +D + G++
Sbjct:   21 SLTMIGAA-PSHQTFPEVIPLPNGFQPEGIASGKGTTFYVGSIPTGAVFRGDLRSGEGEVLVPAQAGRSAIGLKYDERSGLLFVSGGNTGYAYFYDGKTGANVAEIQLSTL--PSFINDVVITKEAAYFTNSFQPVLHRVPLAK--------KGGLPPAPTSEEIPLGGDYQFTPGAFNANGIAATPNGKTLIIVNSTEGALYKVDPGTGNATRIDLGGGSVPN--GDGLLLQGKTLYVVQNQLNRIAVIRLKSDFSAGTI 268          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM39_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.670e-55
Identity = 103/176 (58.52%), Postives = 119/176 (67.61%), Query Frame = 1
Query:  163 GNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYK------------------------------------------VDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVD 564
            GNIWKGDLETG+G+V EL APGPAVGLD+DRRSGYLFVAGGPVGTARVYDE F LVADL L++ G+S+FVNDVIITKTAA+FTDSFQ K+YK                                          V+LDR +GALV G   VHT++LS+NVPV+EGAFN NG+E  D
Sbjct:    7 GNIWKGDLETGQGEVFELGAPGPAVGLDHDRRSGYLFVAGGPVGTARVYDEDFALVADLVLSD-GNSSFVNDVIITKTAAYFTDSFQPKIYKARQLRPSLNEFRPREWGHSMSSRQHPVLQFEQVSTVSIEEKNVNLDRETGALVDGLA-VHTLVLSDNVPVLEGAFNVNGIEVSD 180          
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L833_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 3.430e-55
Identity = 128/265 (48.30%), Postives = 157/265 (59.25%), Query Frame = 1
Query:    1 MKLSGFLSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVGSLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTARVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLDRHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFSQQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQV--IEVSLSADLTCGSVA 789
            M++SG L A+L  + S     SSRLD       FY          +A V + + GN WK DL+TGEG VMEL APGPA GL +DRRSGYLFVAG   GT RVYDE F LVADLA  + G S  +NDV++TKTAAF+TDS    + KV                                        D+ S LIVVNS SQQ+Y +DPDTG A +VDLGG++L G  GDGLVLRK+TL + DN +E++  ++VSLSADL+CGSVA
Sbjct:    1 MRVSGGLLATLVTVAST----SSRLDP------FYN---------SASVRAPE-GNNWKDDLKTGEGGVMELDAPGPAAGLSHDRRSGYLFVAGAFSGTGRVYDEDFALVADLAFGDVGTS-MINDVVVTKTAAFYTDSIHPHINKV---------------------------------------TDNDSPLIVVNSESQQVYAVDPDTGDATVVDLGGDVL-GPRGDGLVLRKDTL-VSDNVLEKIYEVQVSLSADLSCGSVA 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs771.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Superoxide5.930e-13175.49dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Superoxide3.290e-10965.78dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Superoxide1.470e-6448.85dismutase n=1 Tax=Anaerolineaceae bacterium TaxID=... [more]
Superoxide1.560e-5847.27dismutase n=2 Tax=Haloferax TaxID=2251 RepID=A0A64... [more]
Superoxide1.170e-5746.12dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026... [more]
Superoxide1.180e-5747.84dismutase n=3 Tax=Haloferacaceae TaxID=1644056 Rep... [more]
Superoxide3.450e-5745.56dismutase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Superoxide2.220e-5542.91dismutase (Fragment) n=1 Tax=Chloroflexi bacterium... [more]
Uncharacterized2.670e-5558.52protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.430e-5548.30protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs771contigH-canaliculatus_M_contigs771:3..5463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LPY1
Model size789
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons7
Evalue9.73e-132
EggNOG OGs2D5U8@1|root,2SZPX@2759|Eukaryota
Cds size789
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs771.1.1prot_H-canaliculatus_M_contigs771.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs771 3..5463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854108.8814688-CDS-H-canaliculatus_M_contigs771:2..411696854108.8814688-CDS-H-canaliculatus_M_contigs771:2..41Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs771 3..41 -
1696854108.8956714-CDS-H-canaliculatus_M_contigs771:470..5271696854108.8956714-CDS-H-canaliculatus_M_contigs771:470..527Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs771 471..527 -
1696854108.910014-CDS-H-canaliculatus_M_contigs771:814..9521696854108.910014-CDS-H-canaliculatus_M_contigs771:814..952Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs771 815..952 -
1696854108.9274373-CDS-H-canaliculatus_M_contigs771:2343..24601696854108.9274373-CDS-H-canaliculatus_M_contigs771:2343..2460Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs771 2344..2460 -
1696854108.9373536-CDS-H-canaliculatus_M_contigs771:4141..42871696854108.9373536-CDS-H-canaliculatus_M_contigs771:4141..4287Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs771 4142..4287 -
1696854108.947159-CDS-H-canaliculatus_M_contigs771:4638..47701696854108.947159-CDS-H-canaliculatus_M_contigs771:4638..4770Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs771 4639..4770 -
1696854108.9571667-CDS-H-canaliculatus_M_contigs771:5303..54631696854108.9571667-CDS-H-canaliculatus_M_contigs771:5303..5463Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs771 5304..5463 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs771.1.1

>prot_H-canaliculatus_M_contigs771.1.1 ID=prot_H-canaliculatus_M_contigs771.1.1|Name=mRNA_H-canaliculatus_M_contigs771.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=263bp
MKLSGFLSASLAILGSAFVSASSRLDVIDLPNGFYPEGITNGEGWTAYVG
SLQTGNIWKGDLETGEGQVMELSAPGPAVGLDYDRRSGYLFVAGGPVGTA
RVYDEHFGLVADLALAEEGDSTFVNDVIITKTAAFFTDSFQRKMYKVDLD
RHSGALVGGEGGVHTIMLSENVPVVEGAFNTNGVEAVDDGSKLIVVNSFS
QQLYTIDPDTGVAVLVDLGGELLPGAGGDGLVLRKNTLWIVDNSIEQVIE
VSLSADLTCGSVA
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mRNA from alignment at H-canaliculatus_M_contigs771:3..5463-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs771.1.1 ID=mRNA_H-canaliculatus_M_contigs771.1.1|Name=mRNA_H-canaliculatus_M_contigs771.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=5461bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs771:3..5463- (Hapterophycus canaliculatus Oshoro7m male)
ATGAAGCTTTCTGGATTTTTGTCGGCGTCGCTGGCGATCCTCGGCTCAGC CTTCGTCTCCGCAAGTTCGAGATTGGACGTGATCGATCTTCCCAACGGCT TCTATCCCGAAGGCATCACGAACGGCGAAGGCTGGACAGCATACGTTGGA TCTCTCCAGAGTGAGTTAGCACAGCATCATGGGTCAGCAATGGTTGGCGG GAGGGAGAGAGAGGAGGAAGACTGGCCCTAGATGACAGCCAGAGCTTACG ACTGATCGGCCCACGCTGACACCGCTCTGTCTTGCTCTTGGTACAGGATT GGTGGTCGGTGGGGTAATTCCCCGAAGTCCCCGAGAAAGCGAAGTTGATT GCTGTCTTGTTGGTGCTGGGGTGCAACTCAGACCCAGCTTTGATACTCAG TACCTGTGATATCGACCACAAGAAGCATTCGACCCCTCGTGCAATGTGTG GCGGAGGCAATTCCTGAGAACAAAACACAAAGGTCCTGCACTCAGAACCG TATGTTTCCCCCGCCGACTTCATCTTCAACGTGCCGGGCGAGCGGACGAA ATCAGGAACCTCGAAAATCCTTTCGTCCTTTCATCTCCTCGGAGTCGTGC GCATGGGTGACCTGCCGTCCCGTCACCCAGTCTCCGAAGCCATTCAACCC ACGATACTCGGACTCTCACTTCTCTTGCGCCGCCGCGACTCAGCTGGGAA CATTTGGAAGGGTGATCTCGAAACCGGGGAGGGCCAAGTGATGGAGCTCT CTGCACCTGGACCTGCTGTCGGCCTGGACTACGACCGCCGGTCCGGATAC TTGTTCGTCGCAGGCGGCCCCGTAGGTGGGCTCCGCATACGTCTGTGTTT GCAGTAGGAGTGACGGCGTATCGATTGAATGCACTCGCTCTGGTGGGTTT TACTTCAACGGATTCTTTCGTTCTGAAGGTTGGCTTCCTTTTTTCCGTTG GTCGTTTGCCTTGCTTGCCCTTTTGATTGGTCGTTTCCTGTCCCCACCAA AATTCGATCTGTTTTAGGGTCCTTCGGCCCGCCACCCCTCATGCTATAGC CCCTTCAAGGGGTAACGTCCATCGCCGCGCTCAGCAGCTCTTGTCTTTCC TTATGGTAAGCGTTGTTTTTCTCCGCTCTGATCGATTTCACCCGCCTCGA CCACCAAACTCGGATACGGCTTCTAGGTACTGCCCGCGTTTATGACGAAC ATTTCGGGCTGGTCGCCGACTTGGCCCTTGCCGAGGAAGGAGACTCAACC TTCGTGAACGACGTGATCATCACCAAGACTGCCGCCTTCTTCACGGACTC CTTCCAGCGAAAGATGTACAAGGTGCCCGTGAGAGTACTCCGTTGAGTGG GCGAAGTGTACAGCAGCCTTTGTGGCAGTATCTGTGTGCCTTGATCCTGG CGCACGTTTTTATGTTCGCCCACTGCAACTGGTGCTGCTTATTGCTCCTG GTGTTGGGTTTGTTCGTGTCGTTGCTGTGATTGAAGTTGCTGCTGCTGTA GTTGCTGCTTCTGAGCTGTTGGTGGCGCATGTTTTAAAGAAGACATTGCA ACACCGTTGGAAGACCTCCTGAGGTACGTCTTGCGAGGCGTAGCTCGAGG CTTCTCGAGGCGTAGCTCGAGGCTTCTACTGAGCTCCAAACAATGAGGGT TAATCGATTTGTAAGGTTAGGACAAAAGCACGAACATAACAGGTGATGAA TTGTGCAAATAACTTCAATTTTATGTGATAACATCCTTCGAAAATCAACT TTGTATCATCGTGTAACAGGCCATATGATGTAGGCGAGTGTAAACTCTCG AAAAATACTTCCTGTGATGAGACTCGAAGATGTCAGTACGTGAAAGAGTT CACTGTAGCCCAGGCAGTACTTGGTATAGCCCATCCCGAGAGCATGTCAG GGGCCGAGCAGAAAGAAGCAGAAAGTGACCCAGACGAGAGGGTGCATGCA GGCGACTCTCCTCATCATCATCCGCGATTGCACAAGTTGAGCTGCCGACT AACATACCTCAATTTGGTACACACCTGTATGTATGCAAGCGTGGTTGGAA GGAGAGATCTTGGGACAAGAGCACATGTAACGAGATAGGATGCACACTCC AACGCTTTTCCACATCACCTCAAATCTCTAGCGGAGAGACCTACGTATAG TACCACGGCGATATCCAAATGCCGGGTACTCCGAAAGTGAATGGTTGGGG GAGCGGTGTTATTTGGTGAGATCAACGACGTAAACTCGCACTGACCTCTG TACCTACACAGGACCATCTCGCAACAGAGACGTCCGCCGCGGCGTTTTGA TGCGCAAATATCTAGTACAGATCACGAAACGGTTTTCACGCTCGCACGTA AAGAAAGGCCAGCGAGAGCTTGGTGCTTGGTGCCATTTTGTGGGCAAGGG ACCCCCCTTTGCCCCCGCTGCTCCTGGTGAGGCTTCTGAAGGCTTGCCTC CGGCGTTGACCGGGTCCGACAGCTATCAGTATCTTCCAGAGAGAGAGAGA AAAGGTCCCCGCAGTTTTCTGATTGGCCAATTTTTTTGAAAGGAAATTTC TGGGTTGGCGAAAATTCCATGGTCGGCCGATGACGTCAGCCACGTTCGTG AAGACACTCTTCGCTTAGATTCAATTTTTTCAAATTGACCGTGGACGACT GAATGGATTGATTGGATTGAATGAAGACACCTGCTGATGACACCTACCTG TTTCTCGCTATTAATGAATATTTGCCTGTCTCTGTACTCTGTGTTTGTTG GTTGGTTGTGCCCGACACGGGCTCTGTCTATTTTGTCTACCGAATCGCTC AAAAACAACTTTCAACGTTTCCAGCGGTCGGACGGTGCATCGCGTCGCGC ATCCACTTCTTGGCTCTCGATCTATCTCCTCATCTTTCTCGTCGCGTTTC ATGCAGCGCTGTCAGCGCTGTCCATCGTTGAGCACCACACGCGAGAGCTA TGCACGGCACCATCACTTCGTACTTTTGCTGGATTGTTCCTCAAATTCAT CAGGTAGATCTGGACAGACACAGCGGAGCTTTGGTGGGCGGAGAAGGCGG TGTGCACACCATTATGCTGAGTGAGAATGTGCCCGTGGTGGAGGGGGCGT TCAACACCAACGGCGTCGAGGTCAGCAGTCTTATACATGAACATGTTGTT GTGTTTTCCTTTGGTTACGAAGCAAGCTATGGCGAACAGAGGGACGGCCG TACCTGCGTGTGGCGTTCCTTTCTTCAGAGTTGTACGATGTACGTCCATG TCATACGTTAGACCGGTTTTCATGGGGGAGAAACGTTTCGTTATGTGAAA AAGTTGTTCTTGCGCTACTTTCAGGCGATCCACCTCGCAGAGTACTCGTG ATCAGCTATTTTAGTCTCGAGACAAAATGAAGCTCTCATCGAGGGCTCGA CGCATCGACTGCCTGTTGCGACCGGGTCCGGGTTCTCGTTTTTTCCATAG AGTAATATTTGTCGATTCTTGCTCAAGATTCGTCCAAGACCAACTTTTCT CCAATGTTTGGTCACAAAATAAAAAAAAAACTTTCGGTGCAAATCTTGTT CGAGATGCATAGATTCTGCTACATGGACGAACGTAAAGCCTAGACACCAA GACAACAGCCATCTGACGTACTGAGTCCTTGATGAGAGCTTCAATTTGTC TAGAGGTTGAAATAACTGATTCAGAGTACTTGGCGAGGCAAAGCGGCTGA AAGGTGGGAAATGACATGTTTTTCGCAACGAACTTTTCTCTCCCATAAAA ACCGGTCTTAGGACCGATTATACGTCTCGACTCCCTTCGACGAAGCCGGG TGGTCTTGTCCATAATTTCCGGTCGCCACGTATCAAGGCGCGCAGCAACA TCGGCGTACGCGCCCGCGTCCATTATCATCTCGTACCTGAGACACAGTGA CAGACGAGCATGACGAGCATGACTCGACAGCGGTGCCCTTTCGGCGCATG GATGTTTTTCGCATGAGGATAGTGTTTTCAAGTCGGAGCCTACTCTTGGG AACCTCCGCAGATATTGACTGGCCGAGACGGGTCGGTGCAGAACAACGTC GTCGGACATCCCTAGGCTATTGGACGACCGGCCATGACCCGCCTCGACGA GAGCCTGAGGTCGATTTTTTTTTCTTGCACGAGATTCAGGGCTCCCAAGG ATCTGATTGCTGGAAACCTTAGATGCACTCCGATCATGGCGGCACTCGCA TCTGCCCCGGCGGAATCAAGCAATGCCAGTCATGAGCAGTTGTCTTCAGC GTGCTACGAAACACCAACGCAGATAATTCATTCGCCGAGAAAAAGATTTG CACACAGTTGGGCCAATTCAACGCAACCGTGGCCTGAAAACCATCGTCGT TCCGATGTCGATGACGCGAGGAACTTGCGACGGTTGAGCACCACTTTTCC CCTCGGGCTTTGCTGGATGCTGACGATGAAAATCCAAGTTGTGCTCAACC CACGAGCAACTATCACTCATGCATTGCCGCTCTTGCCTTTTGTCCGGAAA CCTCAACCCAGGCCGTCGATGATGGGTCGAAGCTTATCGTGGTCAACAGT TTTTCGCAGCAGCTGTACACTATCGACCCCGACACCGGCGTCGCCGTTCT TGTCGATCTCGGAGGAGAGCTACTTCCCGGAGCGGGCGGTGATGGCCTGG TGAGTCAGACGAGGTCCTGAGGACGCGTAAAAACAATGCGCCTGATCTGA TTAGATGTAGGAAGATGTTGATGGTGCCCACGTTTTAGCATCCCATACAA CTGAAGAGCTTTGACAGACACATGGGGATGTTTTGCAAAACAAACTGAGA TGCTTGAACCGTTGGTCACCTAAAGCACACCTAAAATAGAGCGACTGGGG CAGAGTCCAACAAGAAGCTTCAAAAATCTCTATCGAAAACGTATTTTCGG GGCTGGATCAACCTCACCCATTCCCCGTTGTTCCAGGTCTTGCGCAAGAA CACGCTGTGGATCGTCGACAACAGCATTGAACAAGTGATCGAGGTAATAT CTAACACCTGCCTTCGCCATCAAGCTTTAACATTCACGTAGTAGTCTCTT TGTCTCCGCCTTGTGCTTCGATCAAGTTGGAGTGCCGTCGAAGGACCGGT ATCTCGTACGCGTGGTCGTCGTCATCGCCGTTGTCCTTGTCGTTGTCGTT ATCAAATTTGTTGTTGTTGTTGTTGTTGTTGTTGTGGTGGTGGTGGTGGT GGTGGTGATGGTTACTGCTGTTGCTGTTTGCCGAGGTCGGCTTCTCCCAA GTCGACTTGCAGAGGCCATACAGGCACTATCACGTGCACGACAGGCGAAC GGCGAACGCACAGCGAAAATCACATCCGATCGCCCTACCGGTAGGATACG TTCGTCCGTCAGTGAGAAACTCGAGGATCATTCAATTCCTGAAAGCAACC TTTGGTCAAAACGAAAAAACAGGTTTCCCTTTCGGCCGACCTAACCTGCG GGTCCGTGGCC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs771:3..5463-

>mRNA_H-canaliculatus_M_contigs771.1.1 ID=mRNA_H-canaliculatus_M_contigs771.1.1|Name=mRNA_H-canaliculatus_M_contigs771.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=789bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs771:3..5463- (Hapterophycus canaliculatus Oshoro7m male)
ATGAAGCTTTCTGGATTTTTGTCGGCGTCGCTGGCGATCCTCGGCTCAGC
CTTCGTCTCCGCAAGTTCGAGATTGGACGTGATCGATCTTCCCAACGGCT
TCTATCCCGAAGGCATCACGAACGGCGAAGGCTGGACAGCATACGTTGGA
TCTCTCCAGACTGGGAACATTTGGAAGGGTGATCTCGAAACCGGGGAGGG
CCAAGTGATGGAGCTCTCTGCACCTGGACCTGCTGTCGGCCTGGACTACG
ACCGCCGGTCCGGATACTTGTTCGTCGCAGGCGGCCCCGTAGGTACTGCC
CGCGTTTATGACGAACATTTCGGGCTGGTCGCCGACTTGGCCCTTGCCGA
GGAAGGAGACTCAACCTTCGTGAACGACGTGATCATCACCAAGACTGCCG
CCTTCTTCACGGACTCCTTCCAGCGAAAGATGTACAAGGTAGATCTGGAC
AGACACAGCGGAGCTTTGGTGGGCGGAGAAGGCGGTGTGCACACCATTAT
GCTGAGTGAGAATGTGCCCGTGGTGGAGGGGGCGTTCAACACCAACGGCG
TCGAGGCCGTCGATGATGGGTCGAAGCTTATCGTGGTCAACAGTTTTTCG
CAGCAGCTGTACACTATCGACCCCGACACCGGCGTCGCCGTTCTTGTCGA
TCTCGGAGGAGAGCTACTTCCCGGAGCGGGCGGTGATGGCCTGGTCTTGC
GCAAGAACACGCTGTGGATCGTCGACAACAGCATTGAACAAGTGATCGAG
GTTTCCCTTTCGGCCGACCTAACCTGCGGGTCCGTGGCC
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