mRNA_H-canaliculatus_M_contigs76835.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: hypothetical (protein n=1 Tax=Lacinutrix algicola TaxID=342954 RepID=UPI000B0EEBAD) HSP 1 Score: 99.0 bits (245), Expect = 9.460e-24 Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 10 LTRGAINTAEEIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
L +GA +T++EI+ + EW KFK SETTI+N+EKEIK LREKI+KA+ EQ+N LK+KL R++ F + I FNE + +E+ FEREF H+M EL ALKDL +NV+
Sbjct: 44 LRQGAADTSKEIKTKVSSEWQKFKAESETTIENSEKEIKVLREKIAKASKSEKEKWTKQLDNLEQKNNELKEKLGKRAKAFTDGVISFNEASIANEQKFEREFLHDMSELGTALKDLFKNNVN 166
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Winogradskyella TaxID=286104 RepID=S7WZY2_9FLAO) HSP 1 Score: 97.1 bits (240), Expect = 4.130e-23 Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 1
Query: 31 TAEEIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
T+EEI+ +K +W+ FKT SET ++NTE IK+LREKI+KA+ E +N LA R+ +FK++ +EFNE E EK FEREFNH+MKE+ ALKDL +N D
Sbjct: 41 TSEEIKTTVKADWENFKTASETAVENTENNIKDLREKIAKASQNEKTRLTVQLDKLELKNXXXXXXLAERAVEFKQDIVEFNESTIESEKRFEREFNHDMKEMGTALKDLFKNNED 156
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: TolA-binding (protein n=1 Tax=Frigoriflavimonas asaccharolytica TaxID=2735899 RepID=A0A8J8K6G9_9FLAO) HSP 1 Score: 90.1 bits (222), Expect = 3.880e-20 Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 1 NEDLTRGAINTAEEIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
N+D+ +GA +T +EI+ + +W+KFKT SE IK++EK+I+ LR KI +AN E A+R + FKE+ IEFN AKE+EK FEREF H+ EL A+KD +NV+
Sbjct: 56 NQDVKQGAKDTNDEIKTAVNSDWEKFKTNSEIAIKDSEKQIQELRIKIDQANKNDKEKLTKQLDKLEXXXXXXXXXXALRGKAFKEDMIEFNASAKENEKEFEREFKHDTDELGTAIKDFFKNNVN 181
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: hypothetical (protein n=1 Tax=Winogradskyella ludwigii TaxID=2686076 RepID=UPI0015C94019) HSP 1 Score: 73.9 bits (180), Expect = 5.080e-14 Identity = 54/113 (47.79%), Postives = 67/113 (59.29%), Query Frame = 1
Query: 40 EIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
EI+ + +W KFKT SETTI+N+EKEIK LREKI+KA+XXXXXX FK+ I FNE + E+ FEREF H+M EL ALKDL +NV+
Sbjct: 54 EIKTAVSADWQKFKTESETTIENSEKEIKLLREKIAKASXXXXXXLTQQLDKLXXXXXXXXXXXXXXXXAFKDGVISFNEASIATERKFEREFTHDMNELGTALKDLFKNNVN 166
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: hypothetical (protein n=1 Tax=Bizionia gelidisalsuginis TaxID=291188 RepID=UPI0011D82AD7) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-12 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 1
Query: 34 AEEIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
+EEI++ + +W +FKT SET I N E +I+ LR KI+KAN XXXXXXXX + I+F+E AK +EK+F+REFNH+M EL ALKDL +NV+
Sbjct: 52 SEEIKMTMTSDWQQFKTASETAIDNAENQIEELRTKIAKANKNEKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMIDFSEAAKANEKSFKREFNHDMDELGTALKDLFKNNVE 166
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: hypothetical (protein n=1 Tax=Winogradskyella helgolandensis TaxID=2697010 RepID=UPI0015C174EF) HSP 1 Score: 67.4 bits (163), Expect = 1.680e-11 Identity = 56/105 (53.33%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 64 EWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
+W KFK SET I+NTE E + XXXXXXXXXXXXXX K+A R++ F E+ I+FN+ AK +EK FEREFNH+M+EL NALKDL +NV+
Sbjct: 62 DWKKFKATSETAIENTENEXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXKVAQRAKAFNEDMIDFNDTAKANEKKFEREFNHDMQELGNALKDLFKNNVN 166
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) TaxID=688270 RepID=E6XED8_CELAD) HSP 1 Score: 64.7 bits (156), Expect = 1.810e-10 Identity = 54/125 (43.20%), Postives = 69/125 (55.20%), Query Frame = 1
Query: 4 EDLTRGAINTAEEIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
EDL N EE + ++ W KF+ SE I +TE +IKNLREKI+K+ XXXXXXXXXX +EFNE A+E EK+FEREF H+ EL ALK + +NV+
Sbjct: 42 EDLKEAVSNATEENKTYVEANWKKFENESEVAIADTETQIKNLREKITKSAKNDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEFNEDAREKEKSFEREFKHDTDELGTALKGIFKNNVE 166
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Winogradskyella eximia TaxID=262006 RepID=A0A3D9H2E4_9FLAO) HSP 1 Score: 63.2 bits (152), Expect = 5.480e-10 Identity = 45/112 (40.18%), Postives = 53/112 (47.32%), Query Frame = 1
Query: 43 IRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
I+ +K +W KFKT SE TI+NTEKEI LR KISKAN E AK +E+ FEREF H+ EL ALKDL DNV+
Sbjct: 42 IKTTVKADWQKFKTASEATIENTEKEIAALRLKISKANDNEKERLTTALDKLXXXXXXXXXXXXXXXXXXXXXXXXXXETAKANEQKFEREFTHDTNELGTALKDLFKDNVN 153
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Winogradskyella TaxID=286104 RepID=A0A1G8JEZ0_9FLAO) HSP 1 Score: 62.0 bits (149), Expect = 1.970e-9 Identity = 61/126 (48.41%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 1 NEDLTRGAINTAEEIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNVD 378
N+DLTRGAI+TAEEI+I + QEWDKFK SE I+ T +EIK LR XXXXXXXXXXXXXX EREF+H+MK LN ALKDL DNV+
Sbjct: 41 NKDLTRGAIDTAEEIKIAVTQEWDKFKASSEKAIEKTGEEIKKLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREFDHDMKTLNQALKDLFKDNVN 166
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Match: Uncharacterized (protein n=2 Tax=Cyclobacterium qasimii TaxID=1350429 RepID=S7V8X8_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 2.540e-8 Identity = 51/107 (47.66%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 55 LKQEWDKFKTVSETTIKNTEKEIKNLREKISKANXXXXXXXXXXXXXXEQRNIVLKDKLAVRSRKFKENKIEFNEKAKEDEKTFEREFNHNMKELNNALKDLLMDNV 375
+++ W KF+ SE I NT+ +IKNLREKISK+ XXXXXXXXXXX +NE A E EK+FEREF H+M EL N+LKD+ DNV
Sbjct: 52 VEENWKKFEGESEVVIANTDTQIKNLREKISKSAKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNEAAGEKEKSFEREFKHDMDELGNSLKDIFKDNV 158 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76835.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76835.2.1 >prot_H-canaliculatus_M_contigs76835.2.1 ID=prot_H-canaliculatus_M_contigs76835.2.1|Name=mRNA_H-canaliculatus_M_contigs76835.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=127bp NEDLTRGAINTAEEIRIVLKQEWDKFKTVSETTIKNTEKEIKNLREKISKback to top mRNA from alignment at H-canaliculatus_M_contigs76835:141..521- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76835.2.1 ID=mRNA_H-canaliculatus_M_contigs76835.2.1|Name=mRNA_H-canaliculatus_M_contigs76835.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=381bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76835:141..521- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76835:141..521- >mRNA_H-canaliculatus_M_contigs76835.2.1 ID=mRNA_H-canaliculatus_M_contigs76835.2.1|Name=mRNA_H-canaliculatus_M_contigs76835.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=381bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76835:141..521- (Hapterophycus canaliculatus Oshoro7m male)back to top |