mRNA_H-canaliculatus_M_contigs76682.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76682.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76682.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: Rhodanese (domain-containing protein n=4 Tax=Roseovarius TaxID=74030 RepID=A3SNN2_ROSNI)

HSP 1 Score: 226 bits (576), Expect = 1.870e-74
Identity = 105/126 (83.33%), Postives = 118/126 (93.65%), Query Frame = 1
Query:    1 KSSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQD-KKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            K++A+MVAEAR+RI E+ETP LI MLD PDVVVVDIRD+RERQRGG+IPGS+HAPRGM+EFWVDPDSPYFKEVFGQ+ K+YVFHCASGWRSALTVATLQDMGFDAAHL+EGFSTWE QGGPV+  E
Sbjct:    6 KTAAEMVAEARARITEIETPDLIKMLDDPDVVVVDIRDVRERQRGGYIPGSVHAPRGMVEFWVDPDSPYFKEVFGQEGKRYVFHCASGWRSALTVATLQDMGFDAAHLREGFSTWEAQGGPVEKAE 131          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: Rhodanese-related (sulfurtransferase n=1 Tax=Primorskyibacter sedentarius TaxID=745311 RepID=A0A4V6NYE4_9RHOB)

HSP 1 Score: 226 bits (576), Expect = 1.940e-74
Identity = 107/125 (85.60%), Postives = 115/125 (92.00%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQD-KKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            SSAQMV  AR+RI E++T  LIAMLD PDVVVVDIRDIRERQRGG+IPGS HAPRGMIEFWVDPDSPY+KEVFGQ+ KKYVFHCASGWRSA+T ATLQDMGFDAAHLKEGFSTWEKQGGPV+ PE
Sbjct:    6 SSAQMVQNARARITEIDTADLIAMLDDPDVVVVDIRDIRERQRGGYIPGSFHAPRGMIEFWVDPDSPYYKEVFGQEGKKYVFHCASGWRSAITTATLQDMGFDAAHLKEGFSTWEKQGGPVEFPE 130          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: rhodanese-like (domain-containing protein n=1 Tax=Roseobacter litoralis TaxID=42443 RepID=UPI001652D4C4)

HSP 1 Score: 224 bits (570), Expect = 1.590e-73
Identity = 103/124 (83.06%), Postives = 113/124 (91.13%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQDKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            +SAQMVA AR+RIEE+ET  LI ML+ P+VVVVDIRD+RERQRGGFIPGS HAPRGMIEFWVDPDSPYFK++F QDKK+VFHCASGWRSALT ATLQDMGF+AAHLKEGFSTWEK GGPV  PE
Sbjct:    7 TSAQMVAAARARIEEIETADLITMLEDPNVVVVDIRDVRERQRGGFIPGSFHAPRGMIEFWVDPDSPYFKDIFAQDKKFVFHCASGWRSALTTATLQDMGFEAAHLKEGFSTWEKHGGPVAFPE 130          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: Sulfurtransferase (n=1 Tax=Thalassococcus sp. S3 TaxID=2017482 RepID=A0A4P6MIA0_9RHOB)

HSP 1 Score: 223 bits (569), Expect = 2.340e-73
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQD-KKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPEE 378
            ++A+MVA AR+RIEEVET  LIAM D PDVVVVDIRD+RERQR GFIPGS HAPRGMIEFWVDPDSPY+K+VFGQ+ KKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPV  P++
Sbjct:    7 TAAEMVAAARARIEEVETKDLIAMHDDPDVVVVDIRDVRERQRSGFIPGSFHAPRGMIEFWVDPDSPYYKDVFGQEGKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVDFPDQ 132          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: Rhodanese-related (sulfurtransferase n=10 Tax=root TaxID=1 RepID=A0A1H2TG49_9RHOB)

HSP 1 Score: 223 bits (568), Expect = 3.110e-73
Identity = 102/124 (82.26%), Postives = 112/124 (90.32%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQDKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            SSA MVA AR+RI E+ETP L+AML  PDVVVVD+RDIRERQR G+IPGS HAPRGMIEFWVDPDSPYFKE+FGQDK +VFHCASGWRSA+T ATLQDMGFDAAHL+EGFSTWEK GGPV+ PE
Sbjct:    6 SSADMVAAARARIREIETPDLMAMLKDPDVVVVDLRDIRERQRSGYIPGSFHAPRGMIEFWVDPDSPYFKEIFGQDKTFVFHCASGWRSAITTATLQDMGFDAAHLREGFSTWEKHGGPVEYPE 129          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: rhodanese-like (domain-containing protein n=1 Tax=Oceaniglobus ichthyenteri TaxID=2136177 RepID=UPI000D3BEBF3)

HSP 1 Score: 223 bits (568), Expect = 3.210e-73
Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQD-KKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            S+A MVA AR+RI+E+E P LIAMLD PDVVVVDIRDIRERQR G+IPG++HAPRGMIEFWVDPDSPYFKEVFGQ+ KKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTW  QGGP++ PE
Sbjct:    8 SAAAMVAAARNRIDEIEAPDLIAMLDDPDVVVVDIRDIRERQRDGYIPGAVHAPRGMIEFWVDPDSPYFKEVFGQEGKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWAAQGGPIEKPE 132          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: Rhodanese-like (domain-containing protein n=1 Tax=Boseongicola sp. CCM32 TaxID=2552942 RepID=A0A4P7JG46_9RHOB)

HSP 1 Score: 223 bits (567), Expect = 5.570e-73
Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQ-DKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            SSAQMVA+AR+RIEE+ET  LIAML+ PDVVVVDIRDIRERQR GFIPGS HAPRGMIEFWVDPDSPYFK++F Q DKK+VFHCASGWRSA+T ATLQDMGF AAHLKEGFSTWEKQGGP+  PE
Sbjct:    7 SSAQMVADARARIEEIETTDLIAMLEDPDVVVVDIRDIRERQRSGFIPGSFHAPRGMIEFWVDPDSPYFKDIFAQEDKKFVFHCASGWRSAITTATLQDMGFKAAHLKEGFSTWEKQGGPIAFPE 131          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: rhodanese-like (domain-containing protein n=1 Tax=Actibacterium sp. 188UL27-1 TaxID=2786961 RepID=UPI00195EC077)

HSP 1 Score: 222 bits (566), Expect = 6.480e-73
Identity = 103/124 (83.06%), Postives = 113/124 (91.13%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQDKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            ++AQMVA+AR+RIEE ETPA+IAM+D PDVV+VDIRD RERQR G+IPGS HAPRGMIEFWVDPDSPYFKE FGQDKKYVFHCASGWRSALTVA LQDMGF+AAHLKEGFSTW   GGPV+ PE
Sbjct:    7 TAAQMVADARARIEEAETPAVIAMVDDPDVVIVDIRDPRERQRTGYIPGSFHAPRGMIEFWVDPDSPYFKEEFGQDKKYVFHCASGWRSALTVAMLQDMGFEAAHLKEGFSTWADHGGPVEKPE 130          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: rhodanese-like (domain-containing protein n=2 Tax=Marinovum algicola TaxID=42444 RepID=UPI0008CAF639)

HSP 1 Score: 222 bits (566), Expect = 6.700e-73
Identity = 103/124 (83.06%), Postives = 116/124 (93.55%), Query Frame = 1
Query:    7 SAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQ-DKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMPE 375
            +AQMVA+AR+RIEE+ET  LIAMLD P++VVVDIRD+RERQR G+IPGS HAPRGMIEFWVDPDSPYFK++FGQ DKK+VFHCASGWRSALT ATLQDMGF+AAHLKEGFSTWEKQGGPV+ PE
Sbjct:    8 AAQMVADARARIEEIETADLIAMLDDPNLVVVDIRDVRERQRSGYIPGSFHAPRGMIEFWVDPDSPYFKDIFGQQDKKFVFHCASGWRSALTTATLQDMGFEAAHLKEGFSTWEKQGGPVEYPE 131          
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Match: Rhodanese-related (sulfurtransferase n=1 Tax=Cognatiyoonia sediminum TaxID=1508389 RepID=A0A1M5T2X9_9RHOB)

HSP 1 Score: 222 bits (565), Expect = 8.910e-73
Identity = 102/123 (82.93%), Postives = 117/123 (95.12%), Query Frame = 1
Query:    4 SSAQMVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAPRGMIEFWVDPDSPYFKEVFGQDKKYVFHCASGWRSALTVATLQDMGFDAAHLKEGFSTWEKQGGPVQMP 372
            S+A+MVA+AR+RIEEVETP LIAM+D P+V++VDIRDIRERQ+G  IPGS+HAPRGM+EFWVDPDSPYFKEVFGQDKKYV HCASGWRSALTVATLQ+MGFDAAHL+EGFSTWE QGGPV++P
Sbjct:    7 SAAEMVADARARIEEVETPDLIAMVDDPNVIIVDIRDIRERQKG-HIPGSVHAPRGMVEFWVDPDSPYFKEVFGQDKKYVLHCASGWRSALTVATLQEMGFDAAHLREGFSTWEAQGGPVEVP 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76682.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Rhodanese1.870e-7483.33domain-containing protein n=4 Tax=Roseovarius TaxI... [more]
Rhodanese-related1.940e-7485.60sulfurtransferase n=1 Tax=Primorskyibacter sedenta... [more]
rhodanese-like1.590e-7383.06domain-containing protein n=1 Tax=Roseobacter lito... [more]
Sulfurtransferase2.340e-7384.13n=1 Tax=Thalassococcus sp. S3 TaxID=2017482 RepID=... [more]
Rhodanese-related3.110e-7382.26sulfurtransferase n=10 Tax=root TaxID=1 RepID=A0A1... [more]
rhodanese-like3.210e-7384.00domain-containing protein n=1 Tax=Oceaniglobus ich... [more]
Rhodanese-like5.570e-7384.00domain-containing protein n=1 Tax=Boseongicola sp.... [more]
rhodanese-like6.480e-7383.06domain-containing protein n=1 Tax=Actibacterium sp... [more]
rhodanese-like6.700e-7383.06domain-containing protein n=2 Tax=Marinovum algico... [more]
Rhodanese-related8.910e-7382.93sulfurtransferase n=1 Tax=Cognatiyoonia sediminum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76682contigH-canaliculatus_M_contigs76682:135..521 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog89187.ISM_14440
PFAMsRhodanese
Model size387
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.16e-74
EggNOG OGsCOG0607@1|root,COG0607@2|Bacteria,1RHQZ@1224|Proteobacteria,2U9DZ@28211|Alphaproteobacteria,46QUV@74030|Roseovarius
DescriptionCOG0607 Rhodanese-related sulfurtransferase
Cds size372
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854105.2849486-CDS-H-canaliculatus_M_contigs76682:134..5061696854105.2849486-CDS-H-canaliculatus_M_contigs76682:134..506Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76682 135..506 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854105.2978864-UTR-H-canaliculatus_M_contigs76682:506..5211696854105.2978864-UTR-H-canaliculatus_M_contigs76682:506..521Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs76682 507..521 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76682.1.1prot_H-canaliculatus_M_contigs76682.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76682 135..506 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76682.1.1

>prot_H-canaliculatus_M_contigs76682.1.1 ID=prot_H-canaliculatus_M_contigs76682.1.1|Name=mRNA_H-canaliculatus_M_contigs76682.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=124bp
MVAEARSRIEEVETPALIAMLDKPDVVVVDIRDIRERQRGGFIPGSIHAP
RGMIEFWVDPDSPYFKEVFGQDKKYVFHCASGWRSALTVATLQDMGFDAA
HLKEGFSTWEKQGGPVQMPEESK*
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mRNA from alignment at H-canaliculatus_M_contigs76682:135..521-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76682.1.1 ID=mRNA_H-canaliculatus_M_contigs76682.1.1|Name=mRNA_H-canaliculatus_M_contigs76682.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=387bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76682:135..521- (Hapterophycus canaliculatus Oshoro7m male)
AAGAGCTCAGCACAAATGGTGGCCGAGGCGCGTAGTCGCATTGAAGAAGT CGAAACACCCGCATTGATTGCCATGCTGGACAAGCCTGATGTCGTTGTTG TCGACATACGCGATATCCGTGAGCGACAACGCGGTGGGTTCATTCCGGGC AGTATTCATGCGCCGCGTGGCATGATCGAATTCTGGGTTGACCCCGATAG CCCTTACTTCAAGGAAGTGTTCGGGCAAGACAAAAAATACGTTTTCCACT GCGCGTCAGGGTGGCGTTCAGCGCTTACCGTGGCAACGTTGCAGGATATG GGCTTCGATGCTGCACACTTGAAAGAAGGATTCTCTACATGGGAGAAGCA AGGAGGCCCAGTGCAAATGCCTGAAGAATCCAAATAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76682:135..521-

>mRNA_H-canaliculatus_M_contigs76682.1.1 ID=mRNA_H-canaliculatus_M_contigs76682.1.1|Name=mRNA_H-canaliculatus_M_contigs76682.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=372bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76682:135..521- (Hapterophycus canaliculatus Oshoro7m male)
ATGGTGGCCGAGGCGCGTAGTCGCATTGAAGAAGTCGAAACACCCGCATT
GATTGCCATGCTGGACAAGCCTGATGTCGTTGTTGTCGACATACGCGATA
TCCGTGAGCGACAACGCGGTGGGTTCATTCCGGGCAGTATTCATGCGCCG
CGTGGCATGATCGAATTCTGGGTTGACCCCGATAGCCCTTACTTCAAGGA
AGTGTTCGGGCAAGACAAAAAATACGTTTTCCACTGCGCGTCAGGGTGGC
GTTCAGCGCTTACCGTGGCAACGTTGCAGGATATGGGCTTCGATGCTGCA
CACTTGAAAGAAGGATTCTCTACATGGGAGAAGCAAGGAGGCCCAGTGCA
AATGCCTGAAGAATCCAAATAA
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