prot_H-canaliculatus_M_contigs76627.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs76627.1.1
Unique Nameprot_H-canaliculatus_M_contigs76627.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length75
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs76627.1.1 vs. uniprot
Match: D8LKA2_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA2_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 2.420e-9
Identity = 35/41 (85.37%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:    1 MCILSTRKFGHSEAVAFSAALSSNTSLGELLASGHRLEAAG 41
            MCILSTRKFG SEA AFSAALS NTSL ELLASGH LE AG
Sbjct:   25 MCILSTRKFGPSEAAAFSAALSGNTSLTELLASGHPLEVAG 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76627.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKA2_ECTSI2.420e-985.37Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 2..72
e-value: 3.3E-13
score: 51.5
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 8..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76627contigH-canaliculatus_M_contigs76627:40..264 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76627.1.1mRNA_H-canaliculatus_M_contigs76627.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs76627 40..270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs76627.1.1 ID=prot_H-canaliculatus_M_contigs76627.1.1|Name=mRNA_H-canaliculatus_M_contigs76627.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=75bp
MCILSTRKFGHSEAVAFSAALSSNTSLGELLASGHRLEAAGAAAFGEALS
RNTTLRSLCVGDNEFGDEVCGLGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf