mRNA_H-canaliculatus_M_contigs7662.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Myosin (light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC78_ECTSI) HSP 1 Score: 287 bits (734), Expect = 5.910e-94 Identity = 141/183 (77.05%), Postives = 158/183 (86.34%), Query Frame = 1
Query: 1 AGILTGLSHEHIIEVRDLYKWDLAYCLAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEERIKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGL--SVVGAVKRTLAGKPFFNEVQWDAVSE 543
AGILTGL+H H++E+R YKW+ AYCLAME MEGGELCEDI+RRVFYSEACARRIILQVL ALA+LHRRGI HRD+KPENLLL RRG E +KLADFG A VLS PTYKVVEPVGSPGYAA E+LRV+PYDG+ADVFSLGVISFVLLSGYLPFGG+ ++ V TL G P F+EVQW AVS+
Sbjct: 95 AGILTGLTHAHVVEMRGFYKWEQAYCLAMERMEGGELCEDIVRRVFYSEACARRIILQVLDALAFLHRRGIIHRDLKPENLLLVRRGSEYVKLADFGFAAVLSQPTYKVVEPVGSPGYAAAEVLRVMPYDGQADVFSLGVISFVLLSGYLPFGGVEGTLTETVNATLEGNPPFDEVQWSAVSD 277
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP3_9PHAE) HSP 1 Score: 275 bits (704), Expect = 2.320e-89 Identity = 137/183 (74.86%), Postives = 153/183 (83.61%), Query Frame = 1
Query: 1 AGILTGLSHEHIIEVRDLYKWDLAYCLAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEERIKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLS--VVGAVKRTLAGKPFFNEVQWDAVSE 543
AGILTGL+H H++E+R YKW+ AYCLAME MEGGELCEDI+RRVFYSEACARR VL ALA+LHRRGI HRD+KPENLLL RRG E +KLADFG A VLS PTYKVVEPVGSPGYAAPE+LRV+PYDG+ADVFSLGVISFVLLSGYLPFGG+ + V T G P F+EVQW AVS+
Sbjct: 77 AGILTGLTHAHVVEMRGFYKWEQAYCLAMERMEGGELCEDIVRRVFYSEACARR----VLDALAFLHRRGIIHRDLKPENLLLVRRGSEYVKLADFGFAAVLSQPTYKVVEPVGSPGYAAPEVLRVMPYDGQADVFSLGVISFVLLSGYLPFGGVDDPLTEIVNATFEGNPPFDEVQWSAVSD 255
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8N5_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.500e-37 Identity = 76/181 (41.99%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYCLAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLL-RRRGEERIKLADFGLAT-VLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVSE 543
IL L+H HII + D ++ Y L ME M GGEL + I+ + +Y+E AR + +++++ Y H+ G+ HRD+KPENLLL + +K+ADFG A VL+P T + G+PGY APE+L IPYD RAD++S+GVI ++LL GY PF + ++ G F+E W VS+
Sbjct: 60 ILKELTHRHIIRLYDFFEEPANYYLIMERMSGGELFDRIVAKAYYNEKEARDVCRILIESVGYCHKHGVAHRDLKPENLLLVSEDNDAEVKIADFGFAKKVLAPKT--LTTQCGTPGYVAPEILEGIPYDTRADMWSVGVILYILLGGYPPFIENNQRELFRKIRRGDYEFHEEYWGTVSK 238
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IFM0_9SPIT) HSP 1 Score: 136 bits (343), Expect = 7.710e-37 Identity = 76/180 (42.22%), Postives = 110/180 (61.11%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYCLAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRR--GEERIKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVS 540
IL + H +I+++ D+++ + CL ME M GGEL + II + +SE AR ++ A+ Y H RGICHRD+KPENLLL+ + G +KLADFGLA +L T + GSPGY APE+L PY + D +S+GV++++LLSG PF V ++ +A K F + W +VS
Sbjct: 44 ILKQMDHPNIVKLLDVFEDEKYLCLVMELMTGGELFDLIIEKEQFSELEAREATRSLIDAIGYCHSRGICHRDIKPENLLLQSKELGLSSLKLADFGLARLLDEKTM-LKTMCGSPGYVAPEVLEEKPYGKQCDCWSIGVVTYILLSGIPPFFADDNVQLFEQIIACKYDFTDENWTSVS 222
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Protein (kinase C4 (Fragment) n=1 Tax=Acanthamoeba castellanii TaxID=5755 RepID=H9C880_ACACA) HSP 1 Score: 139 bits (351), Expect = 1.030e-36 Identity = 77/182 (42.31%), Postives = 112/182 (61.54%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYCLAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEER---IKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVSE 543
I+ L+H +I+++ ++Y+ D + L ME ++G EL + I+ R YSE A IILQV+ A+ YLH GI HRD+KPENLL GEE +K+ADFG + + K++ GSPGY APE+L YD D++S+GVI ++LLSGY PF S K+ + K F++ WD +S+
Sbjct: 132 IMKKLNHPNILKLYEVYEDDEQFYLVMELVKGKELFDKIVERGMYSERDAANIILQVVSAVRYLHENGIAHRDLKPENLLSA--GEEENEIVKIADFGFSKSFADEGEKLMTSCGSPGYVAPEILTAESYDKSVDMWSVGVIIYILLSGYPPFYADSAPALFKKIMDVKYDFDDSVWDDISD 311
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Protein (kinase domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3H4V3_PHYRM) HSP 1 Score: 137 bits (346), Expect = 2.830e-36 Identity = 76/181 (41.99%), Postives = 115/181 (63.54%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYC-LAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEER-IKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVSE 543
IL +SH +II++ D+Y D C L ME+ EGGEL + II + +Y+EA A++++ V + L Y H G+ HRD+KPENLL E IK+ADFG A +++ T + G+PGY APE++R +PYD + D++SLGVI+++LL G+ PF + V +++ L G F +D VS+
Sbjct: 63 ILKDMSHPNIIKLFDVYDGDGPMCFLVMEYAEGGELFDRIIAKEYYTEAEAKKVVKVVAKVLRYCHSEGVTHRDLKPENLLYADETENAVIKIADFGFAKLVTEET-NMSTMCGTPGYYAPEIVRKLPYDSKCDIWSLGVIAYILLCGFPPFYDENQVEEMRKILNGDFEFVAPYFDGVSQ 242
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJN9_PYTOL) HSP 1 Score: 137 bits (346), Expect = 2.830e-36 Identity = 77/182 (42.31%), Postives = 116/182 (63.74%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYC-LAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEE-RIKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVSEV 546
IL L H +II++ D+Y+ D C L ME GGEL + II + +Y+EA A+R++ V + LAY H G+ HRD+KPENLL E+ +IK+ADFG A +++ T + G+PGY APE++R PYD + D++SLGVI+++LL G+ PF + V +++ L G+ F +D VS +
Sbjct: 63 ILKELDHPNIIKLFDVYEDDRDMCYLVMEFAAGGELFDRIIAKEYYTEAEAKRVVKVVAKVLAYCHAEGVTHRDLKPENLLYADESEDAKIKIADFGFAKLVTAET-NMSTMCGTPGYYAPEIVRKQPYDNKCDIWSLGVITYILLCGFPPFYDENQVEEMRKILHGEFEFVAPYFDGVSSL 243
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Pkinase-domain-containing (protein n=2 Tax=Piromyces TaxID=4821 RepID=A0A1Y1VDS2_9FUNG) HSP 1 Score: 138 bits (347), Expect = 4.690e-36 Identity = 76/181 (41.99%), Postives = 119/181 (65.75%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYCLAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEE-RIKLADFGLATVLSPPTYKVVEPV-GSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVSE 543
IL+ + HE+I+++ DLY+ D L ME + GGEL +DI+RR Y+E+ A RI+ ++L A+ YLH GI HRD+KPENLLL + + ++ ++DFGL+ + + +V++ G+PGY APE+L+ Y D++S+GVI+++LL GY PF + V K+ LA + F + WD +SE
Sbjct: 67 ILSKVHHENIVQLYDLYQIDNKIYLVMELVTGGELFDDIVRRGKYTESDAARIVQKILLAIDYLHGMGIAHRDLKPENLLLSDKSKNGKVMISDFGLSKIFN--DEEVMKTACGTPGYVAPEVLKRQGYGKEVDLWSIGVITYILLCGYPPFYDQNNVELYKQILACRYEFEKPWWDNISE 245
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Protein (kinase domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7ILW3_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.690e-36 Identity = 75/182 (41.21%), Postives = 116/182 (63.74%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYCL-AMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEER-IKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVSEV 546
IL L H +II++ D+Y D CL ME+ EGGEL + II + +Y+E A++++ V + L Y H G+ HRD+KPENLL + E+ IK+ADFG A +++ T + G+PGY APE++R +PYD + D++SLGVI+++LL G+ PF + V +++ L G F +D VS++
Sbjct: 63 ILKDLKHPNIIKLHDVYDGDGPMCLLVMENAEGGELFDRIIAKEYYTEGEAKKVVKVVAKVLRYCHAAGVTHRDLKPENLLYADKTEDSVIKIADFGFAKLVTEET-NMSTMCGTPGYYAPEIVRKLPYDSKCDIWSLGVIAYILLCGFPPFYDENQVEEMRKILNGDFEFVAPYFDGVSQL 243
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQ56_BRELC) HSP 1 Score: 137 bits (344), Expect = 5.850e-36 Identity = 75/181 (41.44%), Postives = 117/181 (64.64%), Query Frame = 1
Query: 7 ILTGLSHEHIIEVRDLYKWDLAYC-LAMEHMEGGELCEDIIRRVFYSEACARRIILQVLQALAYLHRRGICHRDVKPENLLLRRRGEER-IKLADFGLATVLSPPTYKVVEPVGSPGYAAPELLRVIPYDGRADVFSLGVISFVLLSGYLPFGGLSVVGAVKRTLAGKPFFNEVQWDAVSE 543
IL + H +II+++D++ D C + ME+ +GGEL + II + +YSEA A++++ V +AL Y H RG+ HRD+KPENLL + IK+ADFG A +L P+ ++ G+PGY APE++R +PY+ + D++SLGVI+++LL G+ PF S V ++ L G F +D VS+
Sbjct: 63 ILKHMCHPNIIKLQDVFDEDGRMCYMVMEYAKGGELFDRIIAKEYYSEAEAKKVVKVVAKALRYCHARGVTHRDLKPENLLYADETDNSVIKVADFGFAKLLKEPS-NMLTMCGTPGYYAPEIVRKLPYNSKCDIWSLGVITYILLCGFPPFYSESHVEEMQNILNGAFEFIAPYFDKVSQ 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7662.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7662.1.1 >prot_H-canaliculatus_M_contigs7662.1.1 ID=prot_H-canaliculatus_M_contigs7662.1.1|Name=mRNA_H-canaliculatus_M_contigs7662.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=186bp AGILTGLSHEHIIEVRDLYKWDLAYCLAMEHMEGGELCEDIIRRVFYSEAback to top mRNA from alignment at H-canaliculatus_M_contigs7662:185..1717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7662.1.1 ID=mRNA_H-canaliculatus_M_contigs7662.1.1|Name=mRNA_H-canaliculatus_M_contigs7662.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1533bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7662:185..1717- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7662:185..1717- >mRNA_H-canaliculatus_M_contigs7662.1.1 ID=mRNA_H-canaliculatus_M_contigs7662.1.1|Name=mRNA_H-canaliculatus_M_contigs7662.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=558bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7662:185..1717- (Hapterophycus canaliculatus Oshoro7m male)back to top |