mRNA_H-canaliculatus_M_contigs76472.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76472.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76472.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=2 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A5P3A5W8_9RHOB)

HSP 1 Score: 265 bits (678), Expect = 4.590e-84
Identity = 126/175 (72.00%), Postives = 151/175 (86.29%), Query Frame = 1
Query:    1 DLTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            D+TDPLTI+G + P IA+ G SLLMVSTTGE  AY+ELDE+L+PV + +P+RL  S  RIEENCEPALCSV+FMGGAGGSLR+GVT NP+ LTRSV+ ALTRVT GGAP Y+WPGGGIT+M+DV+ MPSNAFGYVPTPALVAPIEFT+RR DYEA+GGHM HI+ L++A++G  G
Sbjct:  308 DMTDPLTILGPWNPKIARPGLSLLMVSTTGEHAAYYELDEDLRPVRMEIPDRLIPSTRRIEENCEPALCSVLFMGGAGGSLRAGVTRNPIGLTRSVQNALTRVTVGGAPAYVWPGGGITLMADVTQMPSNAFGYVPTPALVAPIEFTLRRADYEALGGHMDHIVPLSEALEGTLG 482          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=1 Tax=Marinibacterium profundimaris TaxID=1679460 RepID=UPI0018E96C95)

HSP 1 Score: 259 bits (663), Expect = 4.130e-82
Identity = 125/174 (71.84%), Postives = 147/174 (84.48%), Query Frame = 1
Query:    4 LTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            +TDPLTI+G + P  A+ G SLLMVSTTGE  AY+ELDE+L+PV L +PERL  S  RIEENCEPALCSV+FMGGAGGSLR+GVT NPV LTRSV++ALTRVT GGAP YIWPGGGIT+M+DV+ MP NAFGYVPTPALVAPIEFT+RR DY A+GGHM +++ L+DA+ G  G
Sbjct:  283 MTDPLTILGPWNPKHARPGLSLLMVSTTGEHAAYYELDEDLRPVQLEIPERLLPSTRRIEENCEPALCSVLFMGGAGGSLRAGVTQNPVGLTRSVQKALTRVTVGGAPAYIWPGGGITLMADVTQMPENAFGYVPTPALVAPIEFTLRRSDYAALGGHMDYVVPLSDALSGVPG 456          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=1 Tax=Marinovum sp. TaxID=2024839 RepID=A0A2E8JHE3_9RHOB)

HSP 1 Score: 259 bits (663), Expect = 5.970e-82
Identity = 124/175 (70.86%), Postives = 147/175 (84.00%), Query Frame = 1
Query:    1 DLTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            DL DPLTI+GDF    A  GQSLLMVSTTGE FAY+ELD++L+PV   MPERL+ SIERI+ENCEPALCSVVF+GGAGGSLRSGVT NPV+LT+S + ALT VTCGGAP+Y WPGGGITVMSDV+ MP N+FGYVPTPALVAPIEFT+  + Y A+GGH+ HI+ L +A++  +G
Sbjct:  296 DLEDPLTILGDFNDKKASPGQSLLMVSTTGEHFAYYELDDDLKPVQKDMPERLKPSIERIDENCEPALCSVVFIGGAGGSLRSGVTENPVKLTQSAQSALTNVTCGGAPSYRWPGGGITVMSDVAKMPENSFGYVPTPALVAPIEFTMSLEGYRALGGHVDHIIDLDEAIEANSG 470          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=6 Tax=Rhodobacterales TaxID=204455 RepID=A0A1P8V044_9RHOB)

HSP 1 Score: 258 bits (660), Expect = 1.770e-81
Identity = 126/175 (72.00%), Postives = 145/175 (82.86%), Query Frame = 1
Query:    1 DLTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            DL+DPL I+G +KP IA  G SLLMVSTTGE  AYFEL+E+L PV   MPERL  S+ RIE+NCEP+L SV+FM GAGGSLRSGVT NPV LTRSV+  LTRVTCGGAP  IWPGGGIT MSDV+ MP NAFGYVPTPALVAPIEFT+RR+DY+A+GGHM ++M L +A+KG TG
Sbjct:  300 DLSDPLEILGAWKPGIAWPGLSLLMVSTTGEHAAYFELNEDLVPVEKEMPERLLPSVRRIEDNCEPSLASVLFMAGAGGSLRSGVTENPVSLTRSVQSRLTRVTCGGAPVMIWPGGGITFMSDVTQMPKNAFGYVPTPALVAPIEFTMRREDYQALGGHMDYVMPLEEALKGVTG 474          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=2 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DXC0_9PROT)

HSP 1 Score: 257 bits (657), Expect = 4.990e-81
Identity = 125/174 (71.84%), Postives = 146/174 (83.91%), Query Frame = 1
Query:    4 LTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            L DPL+I+G F P  A+AGQSLLMVSTTGE  AYFEL+++L PV + MP+RLQ SI+RIEENCEPAL SVVFM GAGGSLRSGVT +PV LTRSV+Q+LT V+CGGAP YIWPGGGIT M+DV+ MP NAFGYVPTPALVAPIEFT+R  DY A+GGHM ++M L +A+ G TG
Sbjct:  295 LQDPLSIIGAFDPKTARAGQSLLMVSTTGEHAAYFELNDDLVPVQMDMPDRLQPSIKRIEENCEPALTSVVFMAGAGGSLRSGVTEHPVGLTRSVQQSLTYVSCGGAPVYIWPGGGITFMADVTRMPKNAFGYVPTPALVAPIEFTMRAADYRALGGHMDYVMPLAEALSGKTG 468          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8HAQ5_9HYPH)

HSP 1 Score: 256 bits (655), Expect = 8.740e-81
Identity = 124/173 (71.68%), Postives = 146/173 (84.39%), Query Frame = 1
Query:    1 DLTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGA 519
            D++DPLTI+GDF P IA  G  LLMVSTTGEQ AYFELDE+L+PVA  +PE L  S+ERI+ENCEPA+ SV+FMGGAGGSLR+GVT NPV+LTRSVK  LT VTCGGAP Y+WPGGGITVM DV+ MP+ +FGYVPTPALVAPIEFT+RR+DYE +GGHM  I+ + DAV+ A
Sbjct:  296 DISDPLTILGDFNPKIAWPGLRLLMVSTTGEQHAYFELDEDLKPVARELPEALVQSVERIQENCEPAMSSVLFMGGAGGSLRAGVTENPVKLTRSVKDLLTVVTCGGAPAYVWPGGGITVMVDVTRMPAMSFGYVPTPALVAPIEFTMRREDYERLGGHMSAIVPIGDAVEQA 468          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=3 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A5B8FSC7_9RHOB)

HSP 1 Score: 256 bits (654), Expect = 1.520e-80
Identity = 124/175 (70.86%), Postives = 146/175 (83.43%), Query Frame = 1
Query:    1 DLTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            DLT+PL I+G F P  A  G SLLMVSTTGE  AYFELD++L PV  P+P RLQ S+ RIEENCEPA+ SV+FM GAGGSLRSGVT NPV LTRSV++ALT V+CGGAP Y+WPGGGIT+M+DV+ MP NAFGYVPTPALVAPIEFT+R +DY A+GGHM +++ L DAVKGA+G
Sbjct:  297 DLTNPLDILGAFNPKQAWPGLSLLMVSTTGEHAAYFELDDSLTPVEKPIPARLQPSVARIEENCEPAMTSVLFMAGAGGSLRSGVTENPVGLTRSVQKALTYVSCGGAPVYVWPGGGITLMADVTRMPLNAFGYVPTPALVAPIEFTMRAEDYRALGGHMDYVIPLADAVKGASG 471          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=2 Tax=Breoghania corrubedonensis TaxID=665038 RepID=A0A2T5V5L0_9HYPH)

HSP 1 Score: 255 bits (652), Expect = 2.730e-80
Identity = 124/174 (71.26%), Postives = 145/174 (83.33%), Query Frame = 1
Query:    4 LTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            LTDPL I+G F P  A+ G SLLMVSTTGE  AYFELDENL PV + MPERLQ S++RIEENCEPAL SV+FM GAGGSLRSGVT +PV LTRSV++ALT V+ GGAP +IWPGGGIT M DV+ +P NAFGYVPTPALVAPIEFT+R DDY A+GGHM ++M L++A++G TG
Sbjct:  295 LTDPLKIIGSFDPRTARPGLSLLMVSTTGEHAAYFELDENLMPVEMEMPERLQPSVKRIEENCEPALTSVLFMAGAGGSLRSGVTEHPVGLTRSVQKALTYVSSGGAPVFIWPGGGITFMVDVTRLPRNAFGYVPTPALVAPIEFTMRADDYRALGGHMDYVMPLSEALEGKTG 468          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IG73_9HYPH)

HSP 1 Score: 254 bits (650), Expect = 2.910e-80
Identity = 121/170 (71.18%), Postives = 143/170 (84.12%), Query Frame = 1
Query:    1 DLTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAV 510
            D+TDPLTI+  F P  A+ GQS+LMVSTTGEQ+AYF LDE+L+PV   +PE L+ S+E IEENCEPALCSV+FMGGAGGSLR+GVT NPV+LTRSV+QALTRVTCGGAP Y WPGGGITVM DV+ MP+N+FGYVPTPA+VAPIEFT+R DDY  +GGH G +  L + V
Sbjct:  297 DVTDPLTIIEGFNPKFAKPGQSMLMVSTTGEQWAYFTLDEDLKPVEHDLPESLRHSVELIEENCEPALCSVLFMGGAGGSLRAGVTENPVRLTRSVQQALTRVTCGGAPAYRWPGGGITVMVDVTAMPANSFGYVPTPAIVAPIEFTLRLDDYLELGGHGGEVKRLDEVV 466          
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Match: 6-hydroxynicotinate (reductase n=2 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI001680D16F)

HSP 1 Score: 254 bits (648), Expect = 1.110e-79
Identity = 123/174 (70.69%), Postives = 142/174 (81.61%), Query Frame = 1
Query:    4 LTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMPERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQALTRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRRDDYEAMGGHMGHIMSLTDAVKGATG 525
            L DPL I+G F P  A+ G S+LMVSTTGE  AY+ELDENL PV   MPERLQ S++RIEENCEPAL SV+FM GAGGSLRSGVT +PV LTRSV+ +LT V+CGGAP YIWPGGGIT M+DV+ MP NAFGYVPTPALVAPIEFT+R DDY A+GGHM ++M L +A+ G TG
Sbjct:  295 LQDPLGIIGKFNPKDARPGLSMLMVSTTGEHSAYYELDENLVPVQKDMPERLQPSVKRIEENCEPALTSVLFMAGAGGSLRSGVTEHPVGLTRSVQNSLTYVSCGGAPVYIWPGGGITFMADVTRMPKNAFGYVPTPALVAPIEFTMRADDYRALGGHMDYVMPLAEALSGKTG 468          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76472.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
6-hydroxynicotinate4.590e-8472.00reductase n=2 Tax=Rhodobacteraceae bacterium TaxID... [more]
6-hydroxynicotinate4.130e-8271.84reductase n=1 Tax=Marinibacterium profundimaris Ta... [more]
6-hydroxynicotinate5.970e-8270.86reductase n=1 Tax=Marinovum sp. TaxID=2024839 RepI... [more]
6-hydroxynicotinate1.770e-8172.00reductase n=6 Tax=Rhodobacterales TaxID=204455 Rep... [more]
6-hydroxynicotinate4.990e-8171.84reductase n=2 Tax=Pacificispira spongiicola TaxID=... [more]
6-hydroxynicotinate8.740e-8171.68reductase n=1 Tax=Kaustia mangrovi TaxID=2593653 R... [more]
6-hydroxynicotinate1.520e-8070.86reductase n=3 Tax=Rhodobacteraceae TaxID=31989 Rep... [more]
6-hydroxynicotinate2.730e-8071.26reductase n=2 Tax=Breoghania corrubedonensis TaxID... [more]
6-hydroxynicotinate2.910e-8071.18reductase n=2 Tax=Alphaproteobacteria TaxID=28211 ... [more]
6-hydroxynicotinate1.110e-7970.69reductase n=2 Tax=Roseibium aggregatum TaxID=18730... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76472contigH-canaliculatus_M_contigs76472:2..526 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog501479.ACNW01000086_gene3921
Preferred nameMA20_26535
Model size525
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02422
KEGG koko:K20449
KEGG ReactionR03164
KEGG Pathwayko00760,ko01120,map00760,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.94e-79
EggNOG OGsCOG2816@1|root,COG2816@2|Bacteria,1MV1F@1224|Proteobacteria,2TTRT@28211|Alphaproteobacteria
EC1.3.7.1
DescriptionCOG1180 Pyruvate-formate lyase-activating enzyme
Cds size525
COG categoryL
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854103.0565186-CDS-H-canaliculatus_M_contigs76472:1..5261696854103.0565186-CDS-H-canaliculatus_M_contigs76472:1..526Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76472 2..526 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76472.1.1prot_H-canaliculatus_M_contigs76472.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76472 2..526 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76472.1.1

>prot_H-canaliculatus_M_contigs76472.1.1 ID=prot_H-canaliculatus_M_contigs76472.1.1|Name=mRNA_H-canaliculatus_M_contigs76472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=175bp
DLTDPLTIVGDFKPDIAQAGQSLLMVSTTGEQFAYFELDENLQPVALPMP
ERLQASIERIEENCEPALCSVVFMGGAGGSLRSGVTANPVQLTRSVKQAL
TRVTCGGAPTYIWPGGGITVMSDVSVMPSNAFGYVPTPALVAPIEFTVRR
DDYEAMGGHMGHIMSLTDAVKGATG
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mRNA from alignment at H-canaliculatus_M_contigs76472:2..526+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76472.1.1 ID=mRNA_H-canaliculatus_M_contigs76472.1.1|Name=mRNA_H-canaliculatus_M_contigs76472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=525bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76472:2..526+ (Hapterophycus canaliculatus Oshoro7m male)
GACCTTACGGATCCATTAACCATAGTGGGTGATTTCAAACCAGATATCGC ACAGGCTGGACAGTCGTTGCTGATGGTGTCGACCACTGGCGAACAGTTTG CCTACTTTGAGTTGGATGAGAACTTACAACCCGTTGCTTTACCAATGCCT GAACGGTTGCAGGCGAGCATAGAACGAATCGAAGAAAATTGTGAACCCGC TCTTTGCAGTGTGGTTTTTATGGGGGGAGCCGGTGGATCTTTACGATCAG GGGTCACAGCTAATCCGGTTCAATTGACCCGATCGGTGAAGCAGGCATTA ACGCGGGTCACCTGTGGTGGTGCGCCAACGTATATCTGGCCTGGTGGTGG AATTACCGTGATGAGTGATGTGTCGGTGATGCCATCAAATGCGTTTGGCT ACGTGCCGACACCGGCACTTGTTGCACCGATCGAATTCACCGTGCGACGT GATGACTATGAAGCAATGGGCGGGCATATGGGGCATATCATGTCTTTGAC TGACGCGGTAAAAGGCGCAACCGGT
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76472:2..526+

>mRNA_H-canaliculatus_M_contigs76472.1.1 ID=mRNA_H-canaliculatus_M_contigs76472.1.1|Name=mRNA_H-canaliculatus_M_contigs76472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=525bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76472:2..526+ (Hapterophycus canaliculatus Oshoro7m male)
GACCTTACGGATCCATTAACCATAGTGGGTGATTTCAAACCAGATATCGC
ACAGGCTGGACAGTCGTTGCTGATGGTGTCGACCACTGGCGAACAGTTTG
CCTACTTTGAGTTGGATGAGAACTTACAACCCGTTGCTTTACCAATGCCT
GAACGGTTGCAGGCGAGCATAGAACGAATCGAAGAAAATTGTGAACCCGC
TCTTTGCAGTGTGGTTTTTATGGGGGGAGCCGGTGGATCTTTACGATCAG
GGGTCACAGCTAATCCGGTTCAATTGACCCGATCGGTGAAGCAGGCATTA
ACGCGGGTCACCTGTGGTGGTGCGCCAACGTATATCTGGCCTGGTGGTGG
AATTACCGTGATGAGTGATGTGTCGGTGATGCCATCAAATGCGTTTGGCT
ACGTGCCGACACCGGCACTTGTTGCACCGATCGAATTCACCGTGCGACGT
GATGACTATGAAGCAATGGGCGGGCATATGGGGCATATCATGTCTTTGAC
TGACGCGGTAAAAGGCGCAACCGGT
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