mRNA_H-canaliculatus_M_contigs76448.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76448.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76448.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T4_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 7.110e-18
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLFAVFDKK SGEIDYEEFVCGLAVTCRGSWEEKVEFI
Sbjct:   63 ERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFI 101          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: N/a (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 7.150e-18
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLFAVFDKK SGEIDYEEFVCGLAVTCRGSWEEKVEFI
Sbjct:   58 ERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFI 96          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA22_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.180e-17
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLFAVFDKK  GE+DYEEFVCGLAVTCRGSW EKVEFI
Sbjct:   63 ERLFAVFDKKNIGEVDYEEFVCGLAVTCRGSWAEKVEFI 101          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.900e-15
Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLFAVFD K SG++D+EEFVCGLAVTCRG W++KV+FI
Sbjct:   46 ERLFAVFDTKRSGKVDFEEFVCGLAVTCRGDWDQKVDFI 84          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RX58_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.810e-9
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLF VFD K +G IDYEEFV GLAV CRGS++EKV  I
Sbjct:   60 ERLFKVFDHKMTGVIDYEEFVTGLAVCCRGSFDEKVALI 98          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBN9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.450e-7
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLFA FD K +G ID+++F+ GLA  CRGS ++K+ F+
Sbjct:   75 ERLFAQFDNKKTGSIDFDDFILGLATVCRGSMDDKIHFV 113          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWP0_PLABS)

HSP 1 Score: 53.1 bits (126), Expect = 5.060e-7
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            +RLFA FD+K  G IDY+EFV GL +  RGS EEK++F+
Sbjct:   60 DRLFAAFDRKNIGAIDYDEFVSGLGLIVRGSLEEKIDFM 98          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Protein (kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5N4_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 9.460e-7
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLF VFD K +G +D+EEFV GLA+  RG++EEKV  I
Sbjct:   84 ERLFYVFDHKHTGAVDFEEFVSGLALCLRGTFEEKVRVI 122          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: CAMK (protein kinase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X5A3_CAPO3)

HSP 1 Score: 50.8 bits (120), Expect = 3.310e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
            ERLFAVFD   + E+DY+EFV GLA+   GS E K++FI
Sbjct:   59 ERLFAVFDVNKNNEVDYDEFVSGLALCFHGSVENKIKFI 97          
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Calcium/calmodulin-dependent (protein kinase type 1 n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VK07_NEOCL)

HSP 1 Score: 47.8 bits (112), Expect = 4.060e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 1
Query:    1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKV 108
            ERLF  FD K SG +DYEEF+ G+AV CRG+  +++
Sbjct:   77 ERLFQKFDFKGSGSVDYEEFLIGIAVCCRGTKSDRM 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
Uncharacterized7.110e-1897.44protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
N/a7.150e-1897.44n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Uncharacterized2.180e-1789.74protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.900e-1576.92protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.810e-971.79protein n=1 Tax=labyrinthulid quahog parasite QPX ... [more]
Hypothetical1.450e-753.85protein (Fragment) n=1 Tax=Spumella elongata TaxID... [more]
Uncharacterized5.060e-758.97protein n=1 Tax=Plasmodiophora brassicae TaxID=373... [more]
Protein9.460e-761.54kinase, putative n=1 Tax=Hondaea fermentalgiana Ta... [more]
CAMK3.310e-658.97protein kinase n=2 Tax=Capsaspora owczarzaki (stra... [more]
Calcium/calmodulin-dependent4.060e-555.56protein kinase type 1 n=1 Tax=Neospora caninum (st... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76448contigH-canaliculatus_M_contigs76448:408..524 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIC5
PFAMsEF-hand_5,PH,Pkinase
Model size117
Max annot lvl2759|Eukaryota
KEGG koko:K08794,ko:K08808
KEGG Pathwayko04921,ko04925,map04921,map04925
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.17e-18
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
EC2.7.11.1,2.7.11.17
Descriptionprotein serine/threonine kinase activity
Cds size117
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854102.7571287-CDS-H-canaliculatus_M_contigs76448:407..5241696854102.7571287-CDS-H-canaliculatus_M_contigs76448:407..524Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76448 408..524 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76448.1.1prot_H-canaliculatus_M_contigs76448.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76448 408..524 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76448.1.1

>prot_H-canaliculatus_M_contigs76448.1.1 ID=prot_H-canaliculatus_M_contigs76448.1.1|Name=mRNA_H-canaliculatus_M_contigs76448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=39bp
ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI
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mRNA from alignment at H-canaliculatus_M_contigs76448:408..524+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76448.1.1 ID=mRNA_H-canaliculatus_M_contigs76448.1.1|Name=mRNA_H-canaliculatus_M_contigs76448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=117bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76448:408..524+ (Hapterophycus canaliculatus Oshoro7m male)
GAGCGACTGTTTGCGGTCTTCGACAAAAAGTGCTCGGGGGAGATCGACTA CGAGGAGTTCGTGTGCGGGCTGGCGGTGACATGCCGGGGCAGCTGGGAGG AGAAGGTGGAGTTCATC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76448:408..524+

>mRNA_H-canaliculatus_M_contigs76448.1.1 ID=mRNA_H-canaliculatus_M_contigs76448.1.1|Name=mRNA_H-canaliculatus_M_contigs76448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=117bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76448:408..524+ (Hapterophycus canaliculatus Oshoro7m male)
GAGCGACTGTTTGCGGTCTTCGACAAAAAGTGCTCGGGGGAGATCGACTA
CGAGGAGTTCGTGTGCGGGCTGGCGGTGACATGCCGGGGCAGCTGGGAGG
AGAAGGTGGAGTTCATC
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