mRNA_H-canaliculatus_M_contigs76448.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T4_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 7.110e-18 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLFAVFDKK SGEIDYEEFVCGLAVTCRGSWEEKVEFI
Sbjct: 63 ERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFI 101
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: N/a (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC5_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 7.150e-18 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLFAVFDKK SGEIDYEEFVCGLAVTCRGSWEEKVEFI
Sbjct: 58 ERLFAVFDKKSSGEIDYEEFVCGLAVTCRGSWEEKVEFI 96
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA22_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.180e-17 Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLFAVFDKK GE+DYEEFVCGLAVTCRGSW EKVEFI
Sbjct: 63 ERLFAVFDKKNIGEVDYEEFVCGLAVTCRGSWAEKVEFI 101
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT6_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.900e-15 Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLFAVFD K SG++D+EEFVCGLAVTCRG W++KV+FI
Sbjct: 46 ERLFAVFDTKRSGKVDFEEFVCGLAVTCRGDWDQKVDFI 84
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RX58_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.810e-9 Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLF VFD K +G IDYEEFV GLAV CRGS++EKV I
Sbjct: 60 ERLFKVFDHKMTGVIDYEEFVTGLAVCCRGSFDEKVALI 98
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBN9_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.450e-7 Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLFA FD K +G ID+++F+ GLA CRGS ++K+ F+
Sbjct: 75 ERLFAQFDNKKTGSIDFDDFILGLATVCRGSMDDKIHFV 113
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWP0_PLABS) HSP 1 Score: 53.1 bits (126), Expect = 5.060e-7 Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
+RLFA FD+K G IDY+EFV GL + RGS EEK++F+
Sbjct: 60 DRLFAAFDRKNIGAIDYDEFVSGLGLIVRGSLEEKIDFM 98
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Protein (kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5N4_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 9.460e-7 Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLF VFD K +G +D+EEFV GLA+ RG++EEKV I
Sbjct: 84 ERLFYVFDHKHTGAVDFEEFVSGLALCLRGTFEEKVRVI 122
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: CAMK (protein kinase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X5A3_CAPO3) HSP 1 Score: 50.8 bits (120), Expect = 3.310e-6 Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFI 117
ERLFAVFD + E+DY+EFV GLA+ GS E K++FI
Sbjct: 59 ERLFAVFDVNKNNEVDYDEFVSGLALCFHGSVENKIKFI 97
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Match: Calcium/calmodulin-dependent (protein kinase type 1 n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VK07_NEOCL) HSP 1 Score: 47.8 bits (112), Expect = 4.060e-5 Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 1
Query: 1 ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKV 108
ERLF FD K SG +DYEEF+ G+AV CRG+ +++
Sbjct: 77 ERLFQKFDFKGSGSVDYEEFLIGIAVCCRGTKSDRM 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76448.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76448.1.1 >prot_H-canaliculatus_M_contigs76448.1.1 ID=prot_H-canaliculatus_M_contigs76448.1.1|Name=mRNA_H-canaliculatus_M_contigs76448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=39bp ERLFAVFDKKCSGEIDYEEFVCGLAVTCRGSWEEKVEFIback to top mRNA from alignment at H-canaliculatus_M_contigs76448:408..524+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76448.1.1 ID=mRNA_H-canaliculatus_M_contigs76448.1.1|Name=mRNA_H-canaliculatus_M_contigs76448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=117bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76448:408..524+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76448:408..524+ >mRNA_H-canaliculatus_M_contigs76448.1.1 ID=mRNA_H-canaliculatus_M_contigs76448.1.1|Name=mRNA_H-canaliculatus_M_contigs76448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=117bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76448:408..524+ (Hapterophycus canaliculatus Oshoro7m male)back to top |