mRNA_H-canaliculatus_M_contigs76438.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76438.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76438.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 3.190e-18
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIAVN 171
            +G+SAIVASWVLSPVLS +IAV LFLF+RTFVLRS DS KRAI +FPFLVTATIAVN
Sbjct:  161 KGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFLVTATIAVN 217
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.010e-17
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIAVN 171
            +G+SAIVASWVLSPVLS +IAV LFLF+RTFVLRS DS +RAI +FPFLVTATIAVN
Sbjct:   76 KGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFLVTATIAVN 132
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 3.510e-16
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIAVN 171
            +GVSAIVASW LSP+ S +IAV LFLF+RTFVLRS D+ KRAI +FPFLVTATIAVN
Sbjct:  160 KGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFLVTATIAVN 216
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.830e-13
Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIAVN 171
            +GVSAIVASW LSPVLS +IAV L+ F+RTFVLR+  S K+AI IFP LVT TIAVN
Sbjct:  168 KGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCLVTVTIAVN 224
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQ90_DIALT)

HSP 1 Score: 65.9 bits (159), Expect = 3.700e-11
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIA 165
            +GV++IV SWV SPVLSGI A  ++LFVRTFVLRSA+S +RAI  FP L+  T+A
Sbjct:  152 KGVASIVLSWVFSPVLSGIFAAGVYLFVRTFVLRSANSTERAIIFFPILIAFTVA 206
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T0D7_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 2.150e-9
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATI 162
            +GVSAIV SW+LSP+ SG+ A  L+LFVRTF+LRS +S  RA   +PFL+ + I
Sbjct:  159 KGVSAIVVSWILSPLFSGVGAAILYLFVRTFILRSENSYTRAFIFYPFLLASAI 212
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IV20_HETAK)

HSP 1 Score: 60.5 bits (145), Expect = 2.940e-9
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATI 162
            +GVSAIV SW LSP+ SG+ A  LFLF RTF+LRS +S  RAI+ +P L+ +TI
Sbjct:  159 KGVSAIVVSWFLSPIFSGVGAAALFLFCRTFILRSENSYNRAIYFYPLLLGSTI 212
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (permease n=10 Tax=Coccolithovirus TaxID=346673 RepID=G4YAP1_9PHYC)

HSP 1 Score: 58.9 bits (141), Expect = 1.030e-8
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1 
Query:    4 GVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIAVN 171
            G+  IV SWV SP+LSGI+AV LFL +RTFVLRSA    R+I  +PFLV   + +N
Sbjct:  156 GIVGIVLSWVFSPLLSGIVAVLLFLSIRTFVLRSAQPFIRSIRAYPFLVWGAVTIN 211
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Phosphate (transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.410e-8
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIAVN 171
            +GV AIV SW L PVLSG++A  LF  VR  VLRS  +  R++ +FP LVT TIA+ 
Sbjct:  161 KGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLLVTVTIAIE 217
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BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BS57_CHRCT)

HSP 1 Score: 57.8 bits (138), Expect = 2.490e-8
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 1 
Query:    1 QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLVTATIAVN 171
             GV  IV SW+ SPVLSGI AV LFLFVRT VLR+ ++  RAI  +P L+   + +N
Sbjct:  163 SGVVGIVLSWIFSPVLSGIFAVLLFLFVRTLVLRTKNAFSRAILFYPVLIWLAVWIN 219
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76438.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Phosphate3.190e-1882.46transporter n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
Phosphate1.010e-1780.70transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
Phosphate3.510e-1677.19transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
Phosphate1.830e-1371.93transporter n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
Phosphate3.700e-1163.64transporter n=4 Tax=Diacronema lutheri TaxID=20814... [more]
Phosphate2.150e-957.41transporter n=2 Tax=Heterosigma akashiwo TaxID=282... [more]
Phosphate2.940e-959.26transporter n=3 Tax=Heterosigma akashiwo TaxID=282... [more]
Phosphate1.030e-857.14permease n=10 Tax=Coccolithovirus TaxID=346673 Rep... [more]
Phosphate1.410e-854.39transporter n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
Hypothetical2.490e-854.39protein (Fragment) n=1 Tax=Chrysotila carterae Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76438contigH-canaliculatus_M_contigs76438:257..427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G0K9
Preferred namePHO89
PFAMsPHO4
Model size171
Max annot lvl2759|Eukaryota
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
Exons1
Evalue5.23e-19
EggNOG OGsCOG0306@1|root,KOG2493@2759|Eukaryota
EC3.4.14.10
Descriptioninorganic phosphate transmembrane transporter activity
Cds size171
COG categoryU
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854102.683674-CDS-H-canaliculatus_M_contigs76438:256..4271696854102.683674-CDS-H-canaliculatus_M_contigs76438:256..427Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76438 257..427 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76438.1.1prot_H-canaliculatus_M_contigs76438.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76438 257..427 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76438.1.1

>prot_H-canaliculatus_M_contigs76438.1.1 ID=prot_H-canaliculatus_M_contigs76438.1.1|Name=mRNA_H-canaliculatus_M_contigs76438.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=57bp
QGVSAIVASWVLSPVLSGIIAVFLFLFVRTFVLRSADSAKRAIFIFPFLV
TATIAVN
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mRNA from alignment at H-canaliculatus_M_contigs76438:257..427-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76438.1.1 ID=mRNA_H-canaliculatus_M_contigs76438.1.1|Name=mRNA_H-canaliculatus_M_contigs76438.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=171bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76438:257..427- (Hapterophycus canaliculatus Oshoro7m male)
CAGGGCGTGTCCGCCATCGTGGCGTCGTGGGTGCTGTCCCCCGTCCTGTC
CGGCATCATCGCGGTGTTCCTCTTCCTGTTCGTGCGGACCTTCGTCCTTC
GCTCGGCGGACTCGGCCAAGCGCGCCATCTTCATCTTCCCCTTCCTGGTG
ACCGCCACCATCGCCGTCAAC
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76438:257..427-

>mRNA_H-canaliculatus_M_contigs76438.1.1 ID=mRNA_H-canaliculatus_M_contigs76438.1.1|Name=mRNA_H-canaliculatus_M_contigs76438.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=171bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76438:257..427- (Hapterophycus canaliculatus Oshoro7m male)
CAGGGCGTGTCCGCCATCGTGGCGTCGTGGGTGCTGTCCCCCGTCCTGTC
CGGCATCATCGCGGTGTTCCTCTTCCTGTTCGTGCGGACCTTCGTCCTTC
GCTCGGCGGACTCGGCCAAGCGCGCCATCTTCATCTTCCCCTTCCTGGTG
ACCGCCACCATCGCCGTCAAC
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