prot_H-canaliculatus_M_contigs76174.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs76174.1.1
Unique Nameprot_H-canaliculatus_M_contigs76174.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length48
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 6.040e-21
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            +DPSGKR VSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV
Sbjct:  721 KDPSGKRAVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 764          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A835ZCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.490e-17
Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYAD 46
            +DP+GKRPVS +A++EAGCMTVCRS AW AKMVTSAWWVYAD
Sbjct:  718 KDPAGKRPVSAMAIQEAGCMTVCRSAAWAAKMVTSAWWVYAD 759          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.060e-12
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            +DP G  P+SP+AL EAGCMTVCRS AW +K+  +AWWV+A QV
Sbjct:  584 KDPKGLAPLSPVALHEAGCMTVCRSAAWSSKIFANAWWVHASQV 627          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A388M4N2_CHABU (CCHC-type domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M4N2_CHABU)

HSP 1 Score: 65.5 bits (158), Expect = 3.430e-11
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            ++P    PV PL L +AGCMTVCRS AW +K+VTSAWWVY  QV
Sbjct:  768 KNPHPTAPVPPLTLNQAGCMTVCRSAAWDSKIVTSAWWVYHHQV 811          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A369RUI7_9METZ (Nuclear export mediator factor NEMF-like protein n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369RUI7_9METZ)

HSP 1 Score: 62.0 bits (149), Expect = 5.710e-10
Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            ++P+GK PV P+ L EAGCM +C S AW AK++TSAWWV+ +QV
Sbjct:  553 KNPTGK-PVPPVTLNEAGCMAICFSAAWNAKVITSAWWVHHNQV 595          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A2T7NWK7_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NWK7_POMCA)

HSP 1 Score: 61.6 bits (148), Expect = 7.810e-10
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            ++PSG+ PV P  L EAG M +C S AW AK+VTSAWWVY DQV
Sbjct:  512 KNPSGE-PVPPKTLNEAGTMAICNSAAWDAKVVTSAWWVYHDQV 554          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A5J5ALQ6_9ASTE (CCHC-type domain-containing protein n=3 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5ALQ6_9ASTE)

HSP 1 Score: 61.2 bits (147), Expect = 1.070e-9
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   10 KRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            ++PV PL L +AGC TVC S AW +K+VTSAWWVY  QV
Sbjct:  605 EQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPQQV 643          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: K1QG24_CRAGI (Serologically defined colon cancer antigen 1-like protein n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QG24_CRAGI)

HSP 1 Score: 60.8 bits (146), Expect = 1.460e-9
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            ++PSG+ PV P +L EAG M +C S AW AK+VTSAWWVY DQV
Sbjct:  550 KNPSGE-PVPPKSLNEAGTMAICNSVAWDAKVVTSAWWVYHDQV 592          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A1S3IJN0_LINUN (nuclear export mediator factor Nemf n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IJN0_LINUN)

HSP 1 Score: 60.8 bits (146), Expect = 1.460e-9
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    5 QDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            ++P+G+ PV P  L EAG M VC S AW AK+VTSAWWVY DQV
Sbjct:  554 KNPTGE-PVPPKTLNEAGTMAVCNSAAWDAKVVTSAWWVYHDQV 596          
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Match: A0A1S3YYW5_TOBAC (nuclear export mediator factor Nemf n=6 Tax=Nicotiana TaxID=4085 RepID=A0A1S3YYW5_TOBAC)

HSP 1 Score: 60.8 bits (146), Expect = 1.460e-9
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0
Query:   12 PVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV 48
            P+ PL L +AGC TVC+S AW +K+VTSAWWVY +QV
Sbjct:  612 PIPPLTLNQAGCFTVCQSQAWDSKIVTSAWWVYPNQV 648          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76174.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHP2_ECTSI6.040e-2195.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCK8_9STRA9.490e-1780.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1AHC6_9STRA2.060e-1263.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A388M4N2_CHABU3.430e-1163.64CCHC-type domain-containing protein n=1 Tax=Chara ... [more]
A0A369RUI7_9METZ5.710e-1059.09Nuclear export mediator factor NEMF-like protein n... [more]
A0A2T7NWK7_POMCA7.810e-1063.64Uncharacterized protein n=2 Tax=Pomacea canalicula... [more]
A0A5J5ALQ6_9ASTE1.070e-964.10CCHC-type domain-containing protein n=3 Tax=Nyssac... [more]
K1QG24_CRAGI1.460e-963.64Serologically defined colon cancer antigen 1-like ... [more]
A0A1S3IJN0_LINUN1.460e-963.64nuclear export mediator factor Nemf n=1 Tax=Lingul... [more]
A0A1S3YYW5_TOBAC1.460e-964.86nuclear export mediator factor Nemf n=6 Tax=Nicoti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008532NFACT, RNA-binding domainPFAMPF05670NFACT-R_1coord: 11..48
e-value: 2.6E-8
score: 34.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76174contigH-canaliculatus_M_contigs76174:212..355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76174.1.1mRNA_H-canaliculatus_M_contigs76174.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs76174 212..355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs76174.1.1 ID=prot_H-canaliculatus_M_contigs76174.1.1|Name=mRNA_H-canaliculatus_M_contigs76174.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=48bp
SSFSQDPSGKRPVSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008532NFACT_RNA-bd