prot_H-canaliculatus_M_contigs76077.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs76077.1.1
Unique Nameprot_H-canaliculatus_M_contigs76077.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length51
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A6H5JAF8_9PHAE (DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAF8_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.130e-24
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG
Sbjct:  565 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 615          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A835Z565_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z565_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.760e-13
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAHVTSD+E  P++RLC D+GVEDV  LSG E+N   + LVF+NG+I+G
Sbjct:  537 ALLAHVTSDEEPEPLVRLCMDMGVEDVTALSGAEINAPDTYLVFMNGAIIG 587          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC)

HSP 1 Score: 70.5 bits (171), Expect = 6.760e-13
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAHVT+D+E+ P+ +LC+DLG+EDV  LSG E+N   + LVFLNG IVG
Sbjct:  535 ALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVG 585          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A7S2EQY7_TRICV (DNA-directed RNA polymerase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQY7_TRICV)

HSP 1 Score: 66.2 bits (160), Expect = 8.920e-13
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAH+T+D++T P+ RLC DLGV DV  L+G E+N   + LVFLNG +VG
Sbjct:   26 ALLAHITTDEDTAPIDRLCRDLGVTDVTMLTGNEINAMGTYLVFLNGLVVG 76          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A7S4DBE3_HETAK (DNA-directed RNA polymerase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBE3_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 1.690e-12
Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAHVTSD E  PVLR C DLGVEDVA LSG EV+   + LVFLNG ++G
Sbjct:  123 ALLAHVTSDAEERPVLRACLDLGVEDVALLSGAEVHAGQAFLVFLNGLLIG 173          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A7R9W253_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W253_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.210e-12
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAH+T+D++TGP+ RLC DLG +DVA ++G E++   + LV LNG +VG
Sbjct:   46 ALLAHITTDEDTGPIERLCRDLGTQDVAAMTGNEIHSEGTYLVLLNGLVVG 96          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A448ZSN6_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSN6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.360e-12
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAH+T+D++T P+ RLC DLGVEDV RLSG E+N + + LV LNG I+G
Sbjct:  615 ALLAHITTDEDTQPIERLCRDLGVEDVLRLSGHEINSQQAYLVLLNGLILG 665          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A7S2XTR5_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTR5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.540e-12
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAH+T+D++T P+ RLC DLGVEDV  LSG E+N + + LV LNG I+G
Sbjct:   23 ALLAHITTDEDTAPIERLCLDLGVEDVKMLSGNEINAKGAYLVLLNGLILG 73          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A1E7EUM7_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUM7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.220e-12
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAH+T+D++T P+ RLC DLGVEDV RLSG E+N   + LV LNG I+G
Sbjct:  562 ALLAHITTDEDTQPIERLCRDLGVEDVLRLSGHEINSHQAYLVLLNGLILG 612          
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Match: A0A7S1V6C3_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V6C3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 7.180e-12
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIVG 51
            ALLAH+T+D++T P+ RL  DLGVEDV RL+G E++ R   LVFLNG I+G
Sbjct:  106 ALLAHITTDEDTQPIRRLSRDLGVEDVKRLTGNEIHSRGGFLVFLNGLILG 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76077.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAF8_9PHAE1.130e-24100.00DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A835Z565_9STRA6.760e-1362.75DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
I2CNY0_NANGC6.760e-1362.75DNA-directed RNA polymerase subunit beta n=3 Tax=M... [more]
A0A7S2EQY7_TRICV8.920e-1358.82DNA-directed RNA polymerase (Fragment) n=1 Tax=Tri... [more]
A0A7S4DBE3_HETAK1.690e-1268.63DNA-directed RNA polymerase (Fragment) n=1 Tax=Het... [more]
A0A7R9W253_9STRA2.210e-1254.90DNA-directed RNA polymerase (Fragment) n=1 Tax=Pse... [more]
A0A448ZSN6_9STRA2.360e-1262.75DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A7S2XTR5_9STRA2.540e-1260.78DNA-directed RNA polymerase (Fragment) n=1 Tax=Att... [more]
A0A1E7EUM7_9STRA3.220e-1262.75DNA-directed RNA polymerase subunit beta n=1 Tax=F... [more]
A0A7S1V6C3_9STRA7.180e-1260.78DNA-directed RNA polymerase (Fragment) n=1 Tax=Gra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76077contigH-canaliculatus_M_contigs76077:148..300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76077.1.1mRNA_H-canaliculatus_M_contigs76077.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs76077 148..300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs76077.1.1 ID=prot_H-canaliculatus_M_contigs76077.1.1|Name=mRNA_H-canaliculatus_M_contigs76077.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=51bp
ALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGRHSSLVFLNGSIV
G
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