prot_H-canaliculatus_M_contigs7585.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7585.2.1
Unique Nameprot_H-canaliculatus_M_contigs7585.2.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length73
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7585.2.1 vs. uniprot
Match: A0A6H5JDM2_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM2_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.310e-28
Identity = 56/65 (86.15%), Postives = 60/65 (92.31%), Query Frame = 0 
Query:    5 FYRKLARRQENILFGRVDASSHPELARHLGLQAVPAFVTFREGEVVTSTATSSKKKIEKLVDELL 69
            FYRKLARRQE +LFGRVDAS+HPELAR LGL AVP+FVTFREGEVVTS ATSSKK IEKLV+ELL
Sbjct:  192 FYRKLARRQEQVLFGRVDASTHPELARQLGLTAVPSFVTFREGEVVTSKATSSKKNIEKLVEELL 256
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BLAST of mRNA_H-canaliculatus_M_contigs7585.2.1 vs. uniprot
Match: D8LU97_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU97_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 3.410e-27
Identity = 57/65 (87.69%), Postives = 60/65 (92.31%), Query Frame = 0 
Query:    5 FYRKLARRQENILFGRVDASSHPELARHLGLQAVPAFVTFREGEVVTSTATSSKKKIEKLVDELL 69
            FYRKLARRQE +LFGRVDASSHPELAR LGL AVP+FVTFREGEVVTS ATSSKK IEKLV+ELL
Sbjct:  439 FYRKLARRQEQVLFGRVDASSHPELARQLGLTAVPSFVTFREGEVVTSKATSSKKNIEKLVEELL 503
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7585.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDM2_9PHAE3.310e-2886.15Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
D8LU97_ECTSI3.410e-2787.69Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 2..70
e-value: 9.4E-11
score: 43.4
NoneNo IPR availableCDDcd02947TRX_familycoord: 2..66
e-value: 2.13499E-10
score: 49.4789
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 5..66
e-value: 3.7E-6
score: 26.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 5..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7585contigH-canaliculatus_M_contigs7585:4147..4365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7585.2.1mRNA_H-canaliculatus_M_contigs7585.2.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7585 4147..4365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7585.2.1 ID=prot_H-canaliculatus_M_contigs7585.2.1|Name=mRNA_H-canaliculatus_M_contigs7585.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=73bp
LLGRFYRKLARRQENILFGRVDASSHPELARHLGLQAVPAFVTFREGEVV
TSTATSSKKKIEKLVDELLLPY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain