mRNA_H-canaliculatus_F_contig1544.4020.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: D7FVS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVS7_ECTSI) HSP 1 Score: 544 bits (1402), Expect = 7.420e-187 Identity = 271/296 (91.55%), Postives = 284/296 (95.95%), Query Frame = 1
Query: 1 GFLVVATRVRLNEFNHDELACDVARDFRVAYRDVEALYGRAAMRRIPLFGVGHSLGAKVHVLLNCYPEVVDVAKRRKANVIISFNNFPAKDSVPLINELRELGLSMGEFGPLGDNLSGIAKAVAGLPMMSGFATQGLSLAEEWAPKAVAAVGSALSDVPQEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRFGRDGELEFSRLDGTHVTPNTPDFRDTRQARDWASKAGMGTQGDAFVEGGAKVAASTASRELDELINALTSYLRSQSLWVRKEGQWDSDEM 888
GFLVVATRVRLNEFNHD+LACDVARDFRVAYRDVEALYGR AMRRIPLFGVGHSLGAKVHVLLNCYPEVVDVA+RRKANVIISFNNFPAKDSVP INELRELGLSM FGPLGDNLSGIAKAV+GLP+++GFA+QGLSLAEEW PKA +AVGS LSDVPQEFKPSP+ATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAE LFNRFGRDGELEFSRLDGTHVTPNTPDFRDTRQARDWA +AGMG QGDAFVEGGA+VAASTAS ELDELI ALTSYLRSQSLWVR+EG+WDSDEM
Sbjct: 168 GFLVVATRVRLNEFNHDQLACDVARDFRVAYRDVEALYGRTAMRRIPLFGVGHSLGAKVHVLLNCYPEVVDVARRRKANVIISFNNFPAKDSVPFINELRELGLSMENFGPLGDNLSGIAKAVSGLPLVNGFASQGLSLAEEWGPKAASAVGSMLSDVPQEFKPSPEATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAEVLFNRFGRDGELEFSRLDGTHVTPNTPDFRDTRQARDWADRAGMGAQGDAFVEGGARVAASTASLELDELIKALTSYLRSQSLWVRREGRWDSDEM 463
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: A0A836CAD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD4_9STRA) HSP 1 Score: 298 bits (764), Expect = 2.340e-91 Identity = 159/293 (54.27%), Postives = 207/293 (70.65%), Query Frame = 1
Query: 1 GFLVVATRVRLNEFNHDELACDVARDFRVAYRDVEALYGRAAMRRIPLFGVGHSLGAKVHVLLNCYPEVVDVAKRRKA---NVIISFNNFPAKDSVPLINELRELGLSMGEFGPLGDNLSGIAKAVA--GLPMMSGFATQGLSLAEEWAPKAVAAVGSALSDVPQEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRFGRDGELEFSRLDGTHVTPNTPDFRDTRQARDWASKAGMGTQGDAFVEG----GAKVAASTASRELDELINALTSYLRSQSLW 852
GF+V+AT +R+NEFNH ELACDVAR+FR+ YRDVEALYGRAA+RR P+FG+GHS+GAK+ VL+NC+P+V DVA+RRKA NV+ISFNNF A+DSVPL+ E+R LGL +G L + + + + VA GL +S A +GL+LA EW G+ L VP EFKP+P W LL Y+VRNNLV+QFK DT+DQS +L+ T+F+RFGRDG L++S L G+HVTPNTPD + +W + A G A G G + +AS A+ ELDELI + YL+SQ+LW
Sbjct: 143 GFVVLATPIRINEFNHQELACDVAREFRLCYRDVEALYGRAALRRAPVFGIGHSMGAKLQVLINCFPDVRDVARRRKAIEANVLISFNNFAARDSVPLLAEMRALGLRLGG---LSEGVKAVRETVASLGLGGLSPMAERGLNLAVEW--------GAGLGGVPDEFKPAPDELWQLLEGEYAVRNNLVVQFKSDTLDQSGRLSRTIFDRFGRDGALQYSTLQGSHVTPNTPDLSEV-DLDEWLTAAAGGGPAAARAAGVASSGVRASASVAAAELDELIRTVVIYLKSQALW 423
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: A0A7S2UUU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUU1_9STRA) HSP 1 Score: 211 bits (537), Expect = 7.680e-60 Identity = 124/303 (40.92%), Postives = 173/303 (57.10%), Query Frame = 1
Query: 1 GFLVVATRVRLNEFNHDELACDVARDFRVAYRDVEALYGRAAMRRIPLFGVGHSLGAKVHVLLNCYPEV--VDVAKRRKANVIISFNNFPAKDSVPLINELRELGLSMGEFGPLGDNLSGIAKAVAG-----LPMM------SGFATQGLSLAEEWAPKAVAAVGSALSDVPQEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRFGRDGELEFSRLDGTHVTPNTPDFRDT--RQARDWASKAGMGTQGDAFVEGGAKVAASTASRELDELINALTSYLRSQSLWVRKE 864
GFLVVAT + N F+H A + R FR A+RD+E LYG A R+P FG+GHSLGAK+ VL +C V D +RR+ANV+ISFNNF A++SVPL+ E+ LG +G+F PL D SG VAG LP + + F QG E+ AP+ V +S++ EF P P+ W + D+Y V+ NL++QFK+D+IDQSP L++ L + R G LEF RLDG H+TP D ++ + DW D F S A E +E++ + ++LR S+W R++
Sbjct: 2 GFLVVATPIMANTFDHRAEAMESCRQFRSAWRDIEDLYGPAQANRLPQFGLGHSLGAKLIVLSSCLRGVGEKDPIERRRANVLISFNNFSARESVPLLEEIGALGKDLGQFQPLLDQFSGQVSNVAGKVQTQLPRIEKSLFSTSFLKQGFEAVEKVAPQIAGIVSDTVSNIEFEFSPDPEEMWQAVEDQYPVKKNLIIQFKKDSIDQSPYLSQLLDEKLDRQGTLEFIRLDGNHLTPVMQDIQNDWFKAQPDWTKSKFT----DEFQ--------SLAMMEFEEMLGIVINFLRENSVWQREQ 292
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: W7TQQ9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQQ9_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.100e-30 Identity = 103/274 (37.59%), Postives = 143/274 (52.19%), Query Frame = 1
Query: 1 GFLVVATRVRLNEFNHDELACDVARDFRVAYRDVEALYGRAAMRRIPLFGVGHSLGAKVHVLLNCYPEVVD--------VAKRRKANVIISFNNFPAKDSVPLINELRELGLSMGEF---GPLGD-----------NLSGIAKAVAGLPMMSGF--ATQGLSLAEEWAPKAVAAVGSALSDVPQ----EFKPSPQATWDLLTD--------------RYSVRNNLVLQFKRDTIDQSPQLAETLFNRFGRDG-----ELEFSRLDGTHVTPNTP 681
G+ V+AT + + F+H A +A + VE +YG +++P+FG+GHSLGAK+ +LL P + A R+ANV+++FNNF AK SVPL+ ELRELG S+ G L D NLSG + A SGF A++GL++A ++ LS +P +F PSP+ TW LL+ Y+V NNLV+ F +DTIDQS +L L R GR+G +E RL GTH+TPNTP
Sbjct: 183 GYCVIATALPFSLFDHAAGARALAMAYARGEAYVEGVYGPRVRQQLPVFGLGHSLGAKMLILLGSPPPSLPSFSSSSAPTAGPRRANVLVAFNNFSAKQSVPLLEELRELGQSVAGMDLSGKLEDISRMVSSLAALNLSGASSPNAQRETTSGFDLASKGLTMAMDF-----------LSSLPTSGVPDFTPSPEETWALLSSPPLFPSSSLPSSSPSYAVLNNLVVSFDKDTIDQSEELVALLRER-GREGGRGGGRVEHVRLVGTHLTPNTP 444
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: A0A7S1HJK2_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HJK2_HEMAN) HSP 1 Score: 131 bits (329), Expect = 5.630e-29 Identity = 95/247 (38.46%), Postives = 129/247 (52.23%), Query Frame = 1
Query: 4 FLVVATRVR-LNEFNHDELACDVARDFRVAYRDVEALYGRAAMR--RIPLFGVGHSLGAKVHVLLNCYPEVVDVAKRRKA-NVIISFNNFPAKDSVPLINEL----RELGLSMGEFGPLGDNLSGIAKAVA---GLPMMSGFATQG-LSLAEEWAPKAVAAVGSALSDVPQEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRF-----GRDGELEFSRLDGTHVTPNTPDFRD 693
F+VVA L+ +H + A + A F A +++ G +P+ GVGHSLG KV VL+ PE + A R KA NV ++FNNF AK+SVP++++L REL + E P+ D + A+ + L + G A G S ++ K A SA + V EF P P T LL D YSV N+V++F DTIDQ +L + L +F G G LE L GTHVTPN PD D
Sbjct: 223 FVVVAAPCAGLSGMDHYKAAYEAAFKFSSACTELKGDLGGDVFDADELPVVGVGHSLGCKVQVLMGAMPEAAEAAGRAKAANVHLAFNNFGAKESVPVLSDLAEAQRELQKGLKEVAPVLDKVGAFAEEIGRNKNLQDIFGAAATGRASEVADFVSKVGRAAASASTPVGDEFAPDPTETMKLLGDDYSVSRNMVVKFSDDTIDQGIELCKQLRTKFTDKVTGTGGRLELKTLPGTHVTPNIPDLSD 469
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: A0A7S1XE42_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XE42_9RHOD) HSP 1 Score: 121 bits (303), Expect = 6.140e-26 Identity = 92/242 (38.02%), Postives = 128/242 (52.89%), Query Frame = 1
Query: 1 GFLVVATRVRLNEFNHDELACDVARDFRVAYRDVEALYGRAAMRR--IPLFGVGHSLGAKVHVLLNCYPEVV-DVAKRRKANVIISFNNFPAKDSVPLINELRELGLSMGEFGPLGDNLSGIAKAVAGLPMMSGFATQGLSLA-EEWAPKAVAAVGSALSDVP--------QEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRFGRDGELEFSRLDGTHVTPNTPDFR 690
G +VVAT V L +FNH +LA D A F +E+ R + R +P+ GVGHSLGAK+HVLLN +V D R NV+IS+NNF A S+P N++ +G G + + G+ V + + G + SL E + ++ AVG L + +EF P P D+L ++Y+V NN V+QF D+ID S LA L RF + F RL GTH+TP TPD +
Sbjct: 123 GCIVVATPVGL-QFNHTQLARDSAITFMETRAAIESSKVRESSRIGFLPVLGVGHSLGAKLHVLLNSDEDVRRDYVGARIGNVLISYNNFSALQSIPRWNDM------IGGMGAASERIRGVRPGVGSI--LDGVRSIANSLGIPERSLDSLNAVGPFLDGLNTALDSLQVEEFLPPPAKVDDMLQNQYAVANNCVVQFVEDSIDDSDNLARVLTTRFSSRNTV-FRRLSGTHLTPVTPDLQ 354
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: A0A7S0W3H1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W3H1_9CRYP) HSP 1 Score: 119 bits (298), Expect = 4.820e-25 Identity = 83/202 (41.09%), Postives = 109/202 (53.96%), Query Frame = 1
Query: 136 IPLFGVGHSLGAKVHVLLNCYPEVVDVAKR-RKANVIISFNNFPAKDSVPLINEL----RELGLSMGEFGPLGDNLSGIAKAVA---GLPMMSGFATQG-LSLAEEWAPKAVAAVGSA--LSDVPQEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRF-----GRDGELEFSRLDGTHVTPNTPDFRD 693
+P+ GVGHSLG KV VL+ P+ + A R R ANV ++FNNF AK+SVP++ EL RE+ + E P+ D + A+ V L + G A G S ++ K A G+A + V EF P PQ T L+ + Y V NLV++F DTIDQ L + L +F G G LE L GTHVTPN PD D
Sbjct: 254 LPVVGVGHSLGCKVQVLMGGLPDASEAAGRPRAANVHVAFNNFGAKESVPILTELAEAQREIQRAAAEVAPVLDKVGAFAEEVTKNKNLQDIFGAAAAGRASEVADFVSKVGRAAGAAGATAAVGDEFAPDPQETLRLVGEGYEVSRNLVVRFSDDTIDQGIDLCKGLRAKFTDKATGVGGRLELKTLPGTHVTPNIPDLSD 455
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: A0A1Z4JNZ5_LEPBY (Uncharacterized protein n=2 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JNZ5_LEPBY) HSP 1 Score: 111 bits (278), Expect = 7.240e-24 Identity = 78/230 (33.91%), Postives = 113/230 (49.13%), Query Frame = 1
Query: 1 GFLVVATRVRLNEFNHDELACDVARDFRVAYRDVEALYGRAAMRRIPLFGVGHSLGAKVHVLLNCYPEVVDVAKRRKANVIISFNNFPAKDSVPLINELRELGLSMGEFGPLGDNLSGIAKAVAGLPMMSGFATQGLSLAEEWAPKAVAAVGSALSDVPQEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRFGRDGELEFSRLDGTHVTPNTPDFR 690
G+LVVAT +N F+H E+A V F A +V + R ++R +P++G+GHS+G K+H+L+ A R NV+ISFNN+ A+D+VPL+ + + F QG+++ EF PSP T L+ DRY+VR NL+++F D+IDQS LA+ L F G + RL GTHVTP PD +
Sbjct: 48 GYLVVATPF-VNTFDHTEIAKSVLVSFERAMENVRS---RVSVRYLPIYGIGHSMGCKLHLLIGSL-----FAVERAGNVLISFNNYAARDAVPLVEQFSQF-----------------------------FKPQGVAV---------------------EFTPSPVETNALIRDRYAVRRNLLIKFADDSIDQSLGLAQLLEESFP--GMIATRRLKGTHVTPLGPDVK 216
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: L1JAP7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAP7_GUITC) HSP 1 Score: 114 bits (284), Expect = 2.080e-23 Identity = 86/251 (34.26%), Postives = 125/251 (49.80%), Query Frame = 1
Query: 7 LVVATRVR-LNEFNHDELACDVARDFRVAYRDVEALYGRAAM--RRIPLFGVGHSLGAKVHVLLNCYPEVVDVAKR-RKANVIISFNNFPAKDSVPLINELRELGLSMGEFGPLGDNLSGIAKAVAGLPMMSGFATQ---GLSLAEEWAPKAVAAVGSALSDVPQ--------------EFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRF-----GRDGELEFSRLDGTHVTPNTP 681
+V+AT L +H + A + A F A + ++ G +P G+GHSLG KVH+L+N + + R R ANV I+FNN+ AK S+P+++EL +L M + G+A A L +S FA L + + ++ + V S + + + EF PSP+ T LL D YSV NL ++F D IDQS L E L ++F G G L+ RL GTH+TPNTP
Sbjct: 118 IVIATPCAGLTGMDHYKAAFEAAYKFAGAAKALQGELGSDMFDPAELPTIGMGHSLGCKVHLLINSIEDTKKIIGRVRAANVHIAFNNYDAKKSIPILSELSKLQSEMSK---------GLAAAAPVLESISAFANSMKTNSQLKDVFGSESASKVFSFIEMLSETGKNYAANNQEPLDEFSPSPEDTMRLLKDEYSVSRNLAVKFLSDDIDQSILLCEALRDKFTSPTTGIGGRLDLKRLPGTHITPNTP 359
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Match: U9VHV5_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9VHV5_9CYAN) HSP 1 Score: 107 bits (268), Expect = 1.310e-22 Identity = 74/233 (31.76%), Postives = 111/233 (47.64%), Query Frame = 1
Query: 1 GFLVVATRVRLNEFNHDELACDVARDFRVAYRDVEALYGRAAM---RRIPLFGVGHSLGAKVHVLLNCYPEVVDVAKRRKANVIISFNNFPAKDSVPLINELRELGLSMGEFGPLGDNLSGIAKAVAGLPMMSGFATQGLSLAEEWAPKAVAAVGSALSDVPQEFKPSPQATWDLLTDRYSVRNNLVLQFKRDTIDQSPQLAETLFNRFGRDGELEFSRLDGTHVTPNTPDFR 690
G+++VAT +N F+HD +A +V F D +Y R + R +P++G+GHS+G KVH+L+ V R N++ISFNN+PA+ S+PL+ + + F P D EF PSP T DL+ DRY+V NL+++F++DTIDQ+ L++ LF RF + ++ L GTH TP D R
Sbjct: 48 GYIIVATPF-INTFDHDAIAAEVLTTF-----DQAMIYLRRQVIGDRYLPIYGMGHSMGCKVHLLIASLYNV-----DRAGNILISFNNYPARKSIPLLEQFVQ-------FAP---------------------------------------------DFDIEFTPSPGQTLDLVRDRYTVGRNLLIKFRKDTIDQTYDLSDVLFQRFPQFTAIQI--LQGTHTTPVAQDVR 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1544.4020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1544.4020.1 >prot_H-canaliculatus_F_contig1544.4020.1 ID=prot_H-canaliculatus_F_contig1544.4020.1|Name=mRNA_H-canaliculatus_F_contig1544.4020.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=255bp MRRIPLFGVGHSLGAKVHVLLNCYPEVVDVAKRRKANVIISFNNFPAKDSback to top mRNA from alignment at H-canaliculatus_F_contig1544:52..4942+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1544.4020.1 ID=mRNA_H-canaliculatus_F_contig1544.4020.1|Name=mRNA_H-canaliculatus_F_contig1544.4020.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4891bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1544:52..4942+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1544:52..4942+ >mRNA_H-canaliculatus_F_contig1544.4020.1 ID=mRNA_H-canaliculatus_F_contig1544.4020.1|Name=mRNA_H-canaliculatus_F_contig1544.4020.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1530bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1544:52..4942+ (Hapterophycus canaliculatus Oshoro5f female)back to top |