mRNA_H-canaliculatus_F_contig15402.3999.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig15402.3999.1
Unique NamemRNA_H-canaliculatus_F_contig15402.3999.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: A0A6H5J9C4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C4_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 6.650e-39
Identity = 78/136 (57.35%), Postives = 97/136 (71.32%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTM 408
            I+H   KSLNVLLDA  TAK+SDFGLA+V+STV   TGG  YHSKVGSDFWM+PEVH +RKAT  SD+FSLHVVMWEV   ++AG G P+GE L   P A+L   S +G +  +   + +++DRCG     +RPTM
Sbjct:  366 IIHDVCKSLNVLLDAEGTAKLSDFGLAQVSSTVNKDTGGT-YHSKVGSDFWMAPEVHVHRKATALSDIFSLHVVMWEVITNQKAGIGPPVGELLLRAPNARLSLESASGPAPLI-ERMQDLLDRCGSLHDKNRPTM 499          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: D7FQW6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW6_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 8.640e-31
Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNP 294
            IVHRD+KSLNVLLDAG TAK+SDFGLA+V+STV   TGG  YHSKVGSDFWM+PEVH +RKAT  SD+FSLHVVMWE    ER     P+G +    P
Sbjct:  382 IVHRDIKSLNVLLDAGGTAKLSDFGLAQVSSTVNKDTGGT-YHSKVGSDFWMAPEVHVHRKATALSDIFSLHVVMWE---SERT----PVGSKQPRTP 471          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: D8LDQ2_ECTSI (ATP binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ2_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 3.990e-20
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVN-STVAASTGGGGY-HSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMNE 414
            ++HRD+KS N+LL  G  AK+SDFGLA    ST+   TG   +   K G+ FWM+PE+ S  +++  SDVFSLHVV+WE+    + G G  IG+ L+ N  AKLP        +     +  ++  CG  +  DRP + E
Sbjct:  247 VLHRDIKSHNILLRNGG-AKVSDFGLATHGCSTMGRKTGNNQFIDEKAGTKFWMAPEILSWGESSFDSDVFSLHVVLWEIIENRQGGTGDAIGDVLRRNRLAKLPIEGEGDERDPATMRLHKLIRTCGLLERKDRPKIGE 385          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: A0A3T1CX39_9VIRU (Ser/Thr protein kinase n=1 Tax=Acanthamoeba castellanii medusavirus TaxID=2080449 RepID=A0A3T1CX39_9VIRU)

HSP 1 Score: 88.2 bits (217), Expect = 1.280e-17
Identity = 49/138 (35.51%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMNE 414
            I+HRD+KS N+L+D  +T K+SDFG A +       T         G+  W +PE+  N+     +DV+S  VV+WE+   +R   G+P+ +   +  + K PP+  + C E  A  IT    RC + KP  RPTM E
Sbjct: 1565 IIHRDIKSSNLLVDEYYTVKVSDFGFARIKQDNVTMT-------NCGTPGWTAPEIIQNQPYDERADVYSFGVVLWEILTHKRPFAGEPMMKVTMAIIDGKRPPIP-SDCHEDYAKLIT----RCWHQKPEKRPTMVE 1690          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: A0A2P6TUF0_CHLSO (Serine threonine-kinase CTR1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TUF0_CHLSO)

HSP 1 Score: 85.9 bits (211), Expect = 8.070e-17
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQER--------AGHGKPI-GERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMNE 414
            +VHRDLKS N+L+D  W  K++DF L+++  T    TG G       +  W++PE+ S   ATRASDVFS  VVMWE+   +         A  GK   GERL + P  K+P    T   + + +++T +++RC   +P +RP   E
Sbjct:  135 VVHRDLKSPNLLVDKSWKVKVADFNLSKILDT---DTGSGRSALANMNPRWLAPEILSGEAATRASDVFSWGVVMWEILTLQLPWPHVKTWAVVGKLTNGERLVAPPRDKVPGAD-TPAFQGLDAYVT-LMERCWAPRPEERPGFRE 276          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: E1ZP01_CHLVA (Protein kinase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZP01_CHLVA)

HSP 1 Score: 83.2 bits (204), Expect = 1.090e-16
Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEV-NSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPI---------GERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMNE 414
            I+HRDLKS N+L+DA W  K+ DF L+++   +V +S+ GG  + +     W++PEV   + AT ASDVFS   V+WE+   +    G  +         GERL   P  +LP +      E  A    +++ RC   + S+RPT  E
Sbjct:   85 ILHRDLKSPNLLVDAAWRVKVCDFNLSKILEDSVRSSSAGGLLNPR-----WLAPEVLMGQNATAASDVFSFGTVLWELLTWQLPWEGVNLYQLVFMVSRGERLAIPPADQLPGVDQLPADEHAA--YVSLIRRCWAQETSERPTFAE 225          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: L8H5T5_ACACA (Guanylate cyclase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5T5_ACACA)

HSP 1 Score: 85.1 bits (209), Expect = 1.530e-16
Identity = 48/138 (34.78%), Postives = 72/138 (52.17%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMNE 414
            I+HRDLKS NVL+D  W AKI+DFGLA +    A  T       + G+  W++PEV    + T  +D++SL +VMWEV  ++    G+ + +      E K PP+        VA     ++  C + KP  RP+  +
Sbjct: 1422 ILHRDLKSSNVLVDESWNAKIADFGLARMKQENATMT-------RCGTPAWIAPEVVMRERYTEKADLYSLGMVMWEVATRKLPFAGENLAKTAVDIVEGKRPPVPANAPKAYVA-----LMTACWHRKPHKRPSAEQ 1547          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: A0A7S0QUW8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QUW8_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 1.730e-16
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNPEAKLPPLSC-TGCSEAVASHITNVVDRCGYGKPSDRPTMNE 414
            IVHRDLKS+N+L+DA W  K+SDFGLA   +T   +      +++VG+  WM+PEV  N+     +DV+S  VV+WE+  +E    G    + +++    + PPL     C    AS++  ++  C    P  RPT  +
Sbjct:  133 IVHRDLKSVNLLVDADWHIKVSDFGLARTKATSQHA------YTQVGTWGWMAPEVLDNKPYDEKADVYSFGVVLWELLTREEPFKGMHPMQIMRAIDRGERPPLPADVNCP---ASYL-ELLHGCWDADPPSRPTFEQ 261          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: D8T1I5_SELML (Protein kinase domain-containing protein (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T1I5_SELML)

HSP 1 Score: 82.8 bits (203), Expect = 2.670e-16
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHG----KPIGERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMNE 414
            IVHRDLKS N+L+D  W  K+ DFGL+ +  +   S+      S  G+  WM+PEV  N  +   SDVFS  V++WE+   ++  HG    + +G     +    +PP         V   I +++  C    PS RP+  +
Sbjct:  132 IVHRDLKSPNLLVDRNWVVKVCDFGLSRIKHSTFLSS-----KSTAGTPEWMAPEVLRNEPSNEKSDVFSFGVILWELATSQKPWHGMNPMQVVGAVGFQHRRLPIPP--------DVDPSIASIIQECWQNDPSQRPSFEK 260          
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Match: A0A1Y1I0W8_KLENI (Protein kinase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0W8_KLENI)

HSP 1 Score: 84.3 bits (207), Expect = 2.810e-16
Identity = 50/137 (36.50%), Postives = 72/137 (52.55%), Query Frame = 1
Query:    1 IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDFWMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNPEAKLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMN 411
            IVHRDLKS+N+L+DA W  K+SDFGLA   +T  A T       +VG+  WM+PEV  N      +DV+S  VV+WE+  +E    G    + +++    + PP+    C  A    +T+    C    P  RPT +
Sbjct: 1174 IVHRDLKSVNLLVDADWHIKVSDFGLARTKATSHAYT-------QVGTWGWMAPEVLDNAPYDEKADVYSYGVVLWELITREEPFKGMHPMQIMRAIDRGERPPMP-ENCPLAYRQLVTD----CWQADPKGRPTFD 1298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15402.3999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9C4_9PHAE6.650e-3957.35Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FQW6_ECTSI8.640e-3167.35Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LDQ2_ECTSI3.990e-2040.00ATP binding protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A3T1CX39_9VIRU1.280e-1735.51Ser/Thr protein kinase n=1 Tax=Acanthamoeba castel... [more]
A0A2P6TUF0_CHLSO8.070e-1737.41Serine threonine-kinase CTR1 n=1 Tax=Chlorella sor... [more]
E1ZP01_CHLVA1.090e-1635.14Protein kinase domain-containing protein n=1 Tax=C... [more]
L8H5T5_ACACA1.530e-1634.78Guanylate cyclase n=1 Tax=Acanthamoeba castellanii... [more]
A0A7S0QUW8_9CHLO1.730e-1635.25Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
D8T1I5_SELML2.670e-1632.39Protein kinase domain-containing protein (Fragment... [more]
A0A1Y1I0W8_KLENI2.810e-1636.50Protein kinase-like n=1 Tax=Klebsormidium nitens T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15402contigH-canaliculatus_F_contig15402:93..1189 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score124.4
Seed ortholog evalue4.1e-26
Seed eggNOG ortholog2880.D7FQW6
Preferred nameRIPK1
KEGG koko:K02861,ko:K04424
KEGG Pathwayko04010,ko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko05160,ko05169,map04010,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map05160,map05169
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0001959,GO:0002218,GO:0002221,GO:0002224,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002756,GO:0002757,GO:0002758,GO:0002761,GO:0002763,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005123,GO:0005126,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006919,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007249,GO:0007254,GO:0007257,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0010803,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022607,GO:0022898,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030162,GO:0030163,GO:0031090,GO:0031098,GO:0031264,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031625,GO:0031982,GO:0032147,GO:0032239,GO:0032268,GO:0032270,GO:0032409,GO:0032412,GO:0032677,GO:0032680,GO:0032757,GO:0032760,GO:0032813,GO:0032872,GO:0032874,GO:0032879,GO:0032991,GO:0033209,GO:0033554,GO:0033674,GO:0034097,GO:0034138,GO:0034612,GO:0034762,GO:0034765,GO:0035556,GO:0035666,GO:0036211,GO:0036289,GO:0042221,GO:0042325,GO:0042327,GO:0042802,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043122,GO:0043123,GO:0043124,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043235,GO:0043269,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043549,GO:0043933,GO:0044070,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044464,GO:0044877,GO:0045088,GO:0045089,GO:0045121,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045859,GO:0045860,GO:0045862,GO:0045893,GO:0045935,GO:0045937,GO:0045944,GO:0046328,GO:0046330,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051291,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051403,GO:0051716,GO:0052547,GO:0052548,GO:0060255,GO:0060544,GO:0060545,GO:0060548,GO:0060759,GO:0065003,GO:0065007,GO:0065009,GO:0070227,GO:0070231,GO:0070265,GO:0070266,GO:0070302,GO:0070304,GO:0070513,GO:0070646,GO:0070647,GO:0070848,GO:0070887,GO:0070926,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071550,GO:0071704,GO:0071840,GO:0071887,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0097190,GO:0097191,GO:0097300,GO:0097342,GO:0097343,GO:0097435,GO:0097527,GO:0097708,GO:0098588,GO:0098589,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0140096,GO:1900407,GO:1900409,GO:1901026,GO:1901031,GO:1901033,GO:1901099,GO:1901564,GO:1901565,GO:1901575,GO:1902041,GO:1902042,GO:1902105,GO:1902107,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1902882,GO:1902884,GO:1903201,GO:1903205,GO:1903209,GO:1903506,GO:1903508,GO:1903555,GO:1903557,GO:1903706,GO:1903708,GO:1903959,GO:1905206,GO:1990000,GO:2000026,GO:2000112,GO:2000116,GO:2000377,GO:2000379,GO:2001023,GO:2001025,GO:2001038,GO:2001040,GO:2001056,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238,GO:2001239,GO:2001240
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.1,2.7.11.25
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons3
Model size416
Cds size414
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15402.3999.1prot_H-canaliculatus_F_contig15402.3999.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig15402 95..1189 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929278.0065637-CDS-H-canaliculatus_F_contig15402:94..2771622929278.0065637-CDS-H-canaliculatus_F_contig15402:94..277Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15402 95..277 -
1696845747.6845238-CDS-H-canaliculatus_F_contig15402:94..2771696845747.6845238-CDS-H-canaliculatus_F_contig15402:94..277Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15402 95..277 -
1622929278.0201445-CDS-H-canaliculatus_F_contig15402:482..5781622929278.0201445-CDS-H-canaliculatus_F_contig15402:482..578Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15402 483..578 -
1696845747.702288-CDS-H-canaliculatus_F_contig15402:482..5781696845747.702288-CDS-H-canaliculatus_F_contig15402:482..578Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15402 483..578 -
1622929278.0367627-CDS-H-canaliculatus_F_contig15402:1054..11891622929278.0367627-CDS-H-canaliculatus_F_contig15402:1054..1189Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15402 1055..1189 -
1696845747.7111976-CDS-H-canaliculatus_F_contig15402:1054..11891696845747.7111976-CDS-H-canaliculatus_F_contig15402:1054..1189Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15402 1055..1189 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig15402.3999.1

>prot_H-canaliculatus_F_contig15402.3999.1 ID=prot_H-canaliculatus_F_contig15402.3999.1|Name=mRNA_H-canaliculatus_F_contig15402.3999.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=138bp
IVHRDLKSLNVLLDAGWTAKISDFGLAEVNSTVAASTGGGGYHSKVGSDF
WMSPEVHSNRKATRASDVFSLHVVMWEVFAQERAGHGKPIGERLQSNPEA
KLPPLSCTGCSEAVASHITNVVDRCGYGKPSDRPTMNE
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mRNA from alignment at H-canaliculatus_F_contig15402:93..1189-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig15402.3999.1 ID=mRNA_H-canaliculatus_F_contig15402.3999.1|Name=mRNA_H-canaliculatus_F_contig15402.3999.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1097bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15402:93..1189- (Hapterophycus canaliculatus Oshoro5f female)
ATAGTCCACCGCGACCTCAAGAGCCTCAACGTCCTCCTCGATGCTGGCTG GACGGCAAAGATCTCCGATTTCGGACTCGCGGAGGTCAACTCCACGGTCG CCGCGAGCACGGGCGGGGGAGGCTACCATAGCAAGGTTTGATGGCTCGGT TCGCAGAGACGTGAGAAAGTTCCGGACGATTCGCTTTCGGTTCTGTTCTG GTTAGGTCTTGCTCGTGTCTGGCTCCGTCCTGTCGAGGTTTAGACCCGAT TCCGGTAAAACCGCGAGGAAAATGCATCCGGAAGCGGGAAGAGGGAAGAG GGACAAGCTTGGGTGGGTGCTCTAGGCGAGCGATCGGATCGGTCGGGGTG GCGCCTGCGTAGAGATGGGGAAGTGGTTGGGACGTGAGTTGTTGATGCTG GTTTCAGCTTGAGCAGTAGTGGGATATTTTCTAGGAGACGTCGCACGTAG CCTCCAGTGGTTTGTTTTGTGCAGATGCCATACATCGCGGAGGCGGTCCC GACGCCAAGCACGGTTGATGTGCACGCGAAGCAATGAACACGGCTTCCCC CCTCTCCTTCCGTATTCGATCTGCCCTCTTCGTCCTTTTTTTCCGGCGCG CTGCCCGTAAGGTCGGGAGCGACTTCTGGATGAGCCCCGAGGTACACTCC AACCGCAAGGCCACGCGAGCAAGCGACGTCTTCAGCCTCCACGTCGTCAT GTGGGAGGTGAGGCTCGAGAGTTGTCGATAGAAACCCCGCCAGCAAGCAG GCAGGGGGCAAGGTGTGTTCACCGTGGTGGGCGAGAATAGTGAGGATTGC TCTCCCGATCCCTCGCGGCATCCTGGGCTGGGGATGTCTCGACGGAGCGG CCACGATGCACGGCCGACGCCCCTCGTCTTGGACCACCCACCCCGCCACC CCGTGCCCTCAGGTTTTCGCTCAGGAGAGAGCGGGCCACGGCAAGCCGAT CGGGGAGCGCCTGCAGAGCAACCCGGAAGCGAAACTCCCCCCGCTGAGCT GCACGGGCTGCTCGGAGGCGGTGGCTAGCCACATCACGAACGTGGTGGAC AGGTGCGGCTACGGAAAACCCTCGGACCGACCGACGATGAATGAGGT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15402:93..1189-

>mRNA_H-canaliculatus_F_contig15402.3999.1 ID=mRNA_H-canaliculatus_F_contig15402.3999.1|Name=mRNA_H-canaliculatus_F_contig15402.3999.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=828bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15402:93..1189- (Hapterophycus canaliculatus Oshoro5f female)
ATAGTCCACCGCGACCTCAAGAGCCTCAACGTCCTCCTCGATGCTGGCTG
GACGGCAAAGATCTCCGATTTCGGACTCGCGGAGGTCAACTCCACGGTCG
CCGCGAGCACGGGCGGGGGAGGCTACCATAGCAAGATAGTCCACCGCGAC
CTCAAGAGCCTCAACGTCCTCCTCGATGCTGGCTGGACGGCAAAGATCTC
CGATTTCGGACTCGCGGAGGTCAACTCCACGGTCGCCGCGAGCACGGGCG
GGGGAGGCTACCATAGCAAGGTCGGGAGCGACTTCTGGATGAGCCCCGAG
GTACACTCCAACCGCAAGGCCACGCGAGCAAGCGACGTCTTCAGCCTCCA
CGTCGTCATGTGGGAGGTCGGGAGCGACTTCTGGATGAGCCCCGAGGTAC
ACTCCAACCGCAAGGCCACGCGAGCAAGCGACGTCTTCAGCCTCCACGTC
GTCATGTGGGAGGTTTTCGCTCAGGAGAGAGCGGGCCACGGCAAGCCGAT
CGGGGAGCGCCTGCAGAGCAACCCGGAAGCGAAACTCCCCCCGCTGAGCT
GCACGGGCTGCTCGGAGGCGGTGGCTAGCCACATCACGAACGTGGTGGAC
AGGTGCGGCTACGGAAAACCCTCGGACCGACCGACGATGAATGAGGTTTT
CGCTCAGGAGAGAGCGGGCCACGGCAAGCCGATCGGGGAGCGCCTGCAGA
GCAACCCGGAAGCGAAACTCCCCCCGCTGAGCTGCACGGGCTGCTCGGAG
GCGGTGGCTAGCCACATCACGAACGTGGTGGACAGGTGCGGCTACGGAAA
ACCCTCGGACCGACCGACGATGAATGAG
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