mRNA_H-canaliculatus_F_contig15387.3981.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: A0A6H5J8L5_9PHAE (DUF5117 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L5_9PHAE) HSP 1 Score: 228 bits (580), Expect = 2.500e-72 Identity = 107/123 (86.99%), Postives = 114/123 (92.68%), Query Frame = 1
Query: 16 EAAEEAGAEPLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGFEIYGDSPE 384
E A E+G EPLTYY+DPSVP EWREYMR+GVEAWRPAFEAAGLGGEAIRAVLP +E WP DYD GDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFT+GWI+SWSA FEIYGDSP+
Sbjct: 109 EPAAESG-EPLTYYVDPSVPPEWREYMRAGVEAWRPAFEAAGLGGEAIRAVLPGDEAWPSDYDPGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTNGWIKSWSASFEIYGDSPD 230
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: D8LLX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX5_ECTSI) HSP 1 Score: 229 bits (583), Expect = 2.580e-68 Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 1
Query: 13 EEAAEEAGAEPLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGFEIYGDSPE 384
E AAE G EPLTYY+DPSVP EWREYMR+GVEAWRPAFEAAGLGGEAIRAVLP +E WP DYD GDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFT+GWI+SWSA FEIYGDSP+
Sbjct: 105 EPAAE--GGEPLTYYVDPSVPPEWREYMRAGVEAWRPAFEAAGLGGEAIRAVLPGDEAWPSDYDPGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTNGWIKSWSASFEIYGDSPD 226
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: A0A4D9CV01_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV01_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.090e-42 Identity = 67/116 (57.76%), Postives = 91/116 (78.45%), Query Frame = 1
Query: 46 LTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGFEIYGDSPESPS 393
+TYYIDP+VP +WRE R GVEAWRPAF+AAG G AIRA+LP+E WP+DY GD+R+++I+W VD+D FALGP+ +DPR+GEIL S I+FT GW++ W + E+ DS ++P+
Sbjct: 339 ITYYIDPTVPKQWRESFRQGVEAWRPAFQAAGFGPAAIRAILPNETGWPDDYQVGDLRYSTISWVVDMDTTFALGPSVVDPRSGEILKSDIIFTHGWVKHWISYMEMM-DSSKNPA 453
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: A0A7S3TG22_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TG22_9SPIT) HSP 1 Score: 149 bits (375), Expect = 3.490e-39 Identity = 72/123 (58.54%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 16 EAAEEAGAE-------PLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGFE 363
+ AEE AE P+T+YIDPSVP WR MR GVEAW PAFE AG +AIRAVLP E DWPEDY A D+R+ SI+WA+ +D V+A+GP T DPRTGEIL + I+F WI +W +GFE
Sbjct: 329 DVAEEVAAERLVVPHKPITFYIDPSVPERWRAAMRRGVEAWLPAFEQAGWR-DAIRAVLPGEPDWPEDYSAADMRYASISWAISMDRVYAVGPHTYDPRTGEILDADIMFAHSWIDAWISGFE 450
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: A0A2E5FHL5_9BACT (Uncharacterized protein n=2 Tax=bacterium TaxID=1869227 RepID=A0A2E5FHL5_9BACT) HSP 1 Score: 144 bits (364), Expect = 1.440e-37 Identity = 58/108 (53.70%), Postives = 85/108 (78.70%), Query Frame = 1
Query: 43 PLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGFEI 366
P+TYY+DP+V +WREY++ G+E W +FEAAG G A++AVLP +EDWP+DY AGD R++S++WA + FA+GP+ +DPRTGEIL++ IVFT+ WI++W+ E+
Sbjct: 286 PITYYVDPTVSEDWREYVKIGIEKWNKSFEAAGWKG-AVKAVLPGDEDWPDDYSAGDSRYSSVSWAPSLASTFAIGPSNVDPRTGEILNADIVFTASWIKAWTGDAEV 392
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: A0A1X6P1S5_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1S5_PORUM) HSP 1 Score: 143 bits (360), Expect = 5.240e-37 Identity = 60/113 (53.10%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 43 PLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGF-EIYGDS 378
P+ Y++DP+VP+ WR+ M+ GVE W AF+AAG +A+RA+LPD++ WPEDY AGD+R+NSI+WA + +ALGP+ +DPRTGE+L++ IVFT GW+R+W + E GD+
Sbjct: 407 PVVYHVDPTVPTAWRQAMKEGVEEWNKAFKAAGHP-DAVRAILPDDDKWPEDYAAGDVRYNSISWAPSLGSTYALGPSDVDPRTGEVLNADIVFTHGWVRAWLRDYREFVGDT 518
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: A0A7J7II70_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7II70_9RHOD) HSP 1 Score: 136 bits (343), Expect = 1.020e-34 Identity = 63/107 (58.88%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 43 PLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAG--LGGEA----IRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRS 345
P YYIDP+VP WR Y++ GVE WR AFE AG G A IRAVLP++ DWP DYD D+R+N+I+W+ VFALGP+ DPRTGEIL+S I+FT GWIRS
Sbjct: 433 PAVYYIDPTVPRRWRPYLKRGVENWRTAFEQAGWETSGSAQEPPIRAVLPEDADWPSDYDIADVRYNTISWSPSTRSVFALGPSNTDPRTGEILNSNIIFTHGWIRS 539
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: A0A7S3G7R3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G7R3_9EUKA) HSP 1 Score: 135 bits (339), Expect = 3.420e-34 Identity = 59/114 (51.75%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 43 PLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGFEIYGDSPE 384
P+TY+IDPSVP++WR ++ GVEAW AFEA G A+RA+LP + D+PEDYDAGDIR++SI+W + +A+GP+T+DPR+GEI+++ I+FT GW+++ A ++Y D E
Sbjct: 281 PITYHIDPSVPAKWRNALKEGVEAWNSAFEAVGFSN-AVRALLPGDADFPEDYDAGDIRYSSISWTPSLYSTYAVGPSTVDPRSGEIINADIMFTEGWVKA--AMSDVYFDDIE 391
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: M1US77_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US77_CYAM1) HSP 1 Score: 134 bits (337), Expect = 6.590e-34 Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 43 PLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEA------IRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRS 345
P +YIDP+VPS WR ++ GVE W AF AG A IRAVLP++ DWP DYD GDIRF++I+W+ ++ VFALGP+ IDPRTGEIL+S I+FT GWIRS
Sbjct: 426 PTVFYIDPTVPSRWRLCLKRGVENWNLAFAQAGWNKSAARVEPAIRAVLPEDSDWPSDYDIGDIRFSTISWSPSLNSVFALGPSNIDPRTGEILNSNIIFTHGWIRS 532
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Match: R1F418_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F418_EMIHU) HSP 1 Score: 134 bits (336), Expect = 9.000e-34 Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 31 AGAEPLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGEAIRAVLPDEEDWPEDYDAGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTSGWIRSWSAGFE 363
A A+P+TY+IDPSVP WR+ M+ GVE W+PAFE AG +AI AV P +E +PEDY A D R+ SI+WAV D V+A+GP + DPRTGEIL + I+F W+ +W GFE
Sbjct: 394 APAKPITYHIDPSVPERWRKAMKLGVELWQPAFERAGWK-DAIIAVAPGDEGFPEDYSAADSRYASISWAVSTDRVYAVGPHSYDPRTGEILDADIMFAHSWVDAWIRGFE 503 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15387.3981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15387.3981.1 >prot_H-canaliculatus_F_contig15387.3981.1 ID=prot_H-canaliculatus_F_contig15387.3981.1|Name=mRNA_H-canaliculatus_F_contig15387.3981.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=131bp MGEAEEAAEEAGAEPLTYYIDPSVPSEWREYMRSGVEAWRPAFEAAGLGGback to top mRNA from alignment at H-canaliculatus_F_contig15387:606..1739- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15387.3981.1 ID=mRNA_H-canaliculatus_F_contig15387.3981.1|Name=mRNA_H-canaliculatus_F_contig15387.3981.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1134bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15387:606..1739- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15387:606..1739- >mRNA_H-canaliculatus_F_contig15387.3981.1 ID=mRNA_H-canaliculatus_F_contig15387.3981.1|Name=mRNA_H-canaliculatus_F_contig15387.3981.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=786bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15387:606..1739- (Hapterophycus canaliculatus Oshoro5f female)back to top |