mRNA_H-canaliculatus_F_contig15.3763.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 502 bits (1293), Expect = 4.680e-163 Identity = 314/601 (52.25%), Postives = 371/601 (61.73%), Query Frame = 1
Query: 847 IGWLAASSGALHG------------GKDGGGIHRFGATSP-NATMVTPRWET------DRLPLD-------ARDGARDENRLPGTQDSEVECYSQKPAA------------GSISTHSVDGRAHVTRDSRSANTQGRRDGAVGEKIIGMAHDVGTHS--SNRRTGSRRRGNGLRAKKPPSHRRSSSIQENERCAGDAVKRNV-----RDGIIAADDDHHNTGDDGESCSNVNSAKAASR-SPVTTTRTCGEQSRRATTGGWFAVQGEERKRGESKRP----DVDDEIEGVDAV-SNESFSDNIVSSKRRYTSKAG--VTDRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGRCNSLLLSFERGRNSALVQCVIVRDRSGMNRLYPQYSFFFEGRGEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCMKQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
+GWLA S+ A G GGG++ S +++ +TP E+ DRL D A D A + +R G + + + + + G ST S++ + SRSA+ G + A + +G H V H S RR + G R K HR SSS A D R+V RDG S + K S+ + V+ +T G + R A G WFA QGE++ R SKR + E +GVDA S++SFSDNIVSS+RR+ K VT R G RC SL+LS+ERG NS LVQCV+VRDRSGMNRLYPQY FFFEGRG+QLMMVAQKC KNRTSNYHVFDM RGGF++RLSKKNGNYLGKVRTNLKRTEAT+FT+D+E+A+LGA+SF+KPG++DHLRDGSQPRKF+VLLPALDCDG+P AHKVDPYDADSDMLS MKQGRHGNMFLLQSREPTYT GNYRLNFHGRVTVPSVKNFQLVSPDD LHTVCQFGKVGEDRFHLDYRAPINAFQA CIS+AQFNF
Sbjct: 1 MGWLAGSTAAATAAATDAESCRTRRGDRGGGLNSSERPSTISSSTLTPSHESRHSSQFDRLNSDNCTYGTEAEDSATERSRRSGDEGNADDTLESRRTSSSRQKKFLSATRGRQSTGSMERSVMDEKHSRSASKAGMKRQA--RRSLGQGHGVARHEGKSTRRHDTMGSDRGRRHDKALPHRESSSAHGRGGLADDVTARDVSRSIARDGDXXXXXXXXXXXXXXXSSTATAEGKEDSQGTAVSHDKTSGIKPRTA-AGAWFAAQGEKKAREGSKRDGNGGESGGERDGVDAAASDDSFSDNIVSSQRRFCGKGEGMVTGRCGGDETTEEDGGRGKDSWASIVEGGRSP----ARCKSLMLSYERGNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEATVFTNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 594
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 310 bits (793), Expect = 7.860e-95 Identity = 146/231 (63.20%), Postives = 184/231 (79.65%), Query Frame = 1
Query: 1798 LVQCVIVRDRSGMNRLYPQYSFFFEGRGEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCMKQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
++QCVI+R+R G++RLYP Y +F+ R + LMM AQK K+RTSNYH+FDM RG LSKK GNYLGKVR+N K+T+ TI+T+D+E +LGAV F+KPG++DH+ +GSQPRKF VLLP +D D P HKVDPYD M+ +K R G MFLLQ+++P + NGNYRLNF GRVTVPSVKNFQLV+PDD+ + V QFGKVG+DRFHLD+RAP+NAFQAF I+L+QFNF
Sbjct: 1 MMQCVILRERQGLHRLYPLYKLYFQDR-DTLMMAAQKHSKSRTSNYHIFDMHRGSAARTLSKKGGNYLGKVRSNFKKTDNTIYTNDQEKEELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQGPMVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFNF 230
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 295 bits (756), Expect = 2.890e-89 Identity = 140/236 (59.32%), Postives = 179/236 (75.85%), Query Frame = 1
Query: 1783 GRNSALVQCVIVRDRSGMNRLYPQYSFFFEGRGEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCMKQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
G + +V+C +VRDR+G RLYPQY +F+ + L +VAQK KNRTSNYH+FDM R GF + LSKKNGNYLGK+R+N K+TE IFT+D E +LGA++F+K G MD +++GSQPRK ++LP LD DG P +K + ++ +LS +K G+ G MF +S++P + GNYRLNFHGRVTV SVKNFQLVSPDD+ + VCQFGKV EDRFHLDYRAP NAFQAF ++L QFNF
Sbjct: 12 GAGAEMVRCAVVRDRTGARRLYPQYRMYFQDT-DTLALVAQKQSKNRTSNYHIFDMMRAGFGNHLSKKNGNYLGKLRSNSKKTENVIFTNDHEKEELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKPERGRPETSLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFNF 246
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 264 bits (675), Expect = 2.980e-78 Identity = 123/209 (58.85%), Postives = 161/209 (77.03%), Query Frame = 1
Query: 1864 FFEGRGEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCMKQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
+F+ R +QL+MV +K +NRT NYH+FDM R F + LSKKNGNYLGK+RTNL++T+ I+T+D E ++GA+ F+KPG +D +++GSQPRK VLLP LD DG P +K +P D+ +L ++ + G MF LQ+++P + GNYRLNFHGRVTV SVKNFQL SPDD+ + VCQFGKV EDRFHLDYRAP+NAFQAF ++L QFNF
Sbjct: 2 YFQDR-DQLVMVGKKQAQNRTPNYHIFDMTRAQFGNHLSKKNGNYLGKLRTNLRKTDTIIYTNDAEREEMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPRRPDTSLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFNF 209
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.220e-65 Identity = 112/241 (46.47%), Postives = 161/241 (66.80%), Query Frame = 1
Query: 1783 GRNSALVQCVIVRDRSGMNRLYPQYSFFFEGR----GEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCMKQGR-HGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
G N +VQC+IVRDRSG+ RL P+Y+ + +G E+L+++A+K +YH++++ RG RL KK GNY+GK++ + + E ++ ++ ++GAV F KP IMDH+RDG+QPRK V+LP D + P K D + +L ++ + L+ +EP + NGNYRLNFHGRVTVPSVKNFQLV P D+ +CQFGKV +DRFHLD++ P+N FQAFC++LAQFN+
Sbjct: 7 GPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSRGHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 231 bits (589), Expect = 6.880e-63 Identity = 112/241 (46.47%), Postives = 161/241 (66.80%), Query Frame = 1
Query: 1783 GRNSALVQCVIVRDRSGMNRLYPQYSFFFEGR----GEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCMKQGR-HGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
G N +VQC+IVRDRSG+ RL P+Y+ + +G E+L+++A+K +YH++++ RG RL KK GNY+GK++ + + E ++ ++ ++GAV F KP IMDH+RDG+QPRK V+LP D + P K D + +L ++ + L+ +EP + NGNYRLNFHGRVTVPSVKNFQLV P D+ +CQFGKV +DRFHLD++ P+N FQAFC++LAQFN+
Sbjct: 226 GPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSRGHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 206 bits (523), Expect = 2.400e-54 Identity = 106/240 (44.17%), Postives = 159/240 (66.25%), Query Frame = 1
Query: 1798 LVQCVIVRDRSGMNRLYPQYSFFFEG---RG-EQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKV---DPYDADSDMLSC--MKQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
+VQC+IVR R + R+ +Y + +G +G E+L++VA+K + + +YH++++ RG RL+KK GNY+GK++ + + E ++ ++ + ++G V F KP IMDH+RDG+QPRK +++P ++ P V DPY + ++QG + + +EP + NGNYRLNF GRVTVPSVKNFQLVS DD+ CQFGKV +DRFHLD++ P+NAFQAFC+ LAQFN+
Sbjct: 194 MVQCLIVRRRVVLQRI-TEYQLYLQGGRKKGHEKLILVARKQAQKQGCSYHIYNVSRGHLGGRLNKKGGNYVGKLKCSGSKIENVMYNNEEKKQEVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVKFNDPYGGLLAQIQVDEIEQG----CSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH) HSP 1 Score: 190 bits (482), Expect = 6.220e-51 Identity = 108/251 (43.03%), Postives = 151/251 (60.16%), Query Frame = 1
Query: 1762 LLLSFERGRNSALVQCVIVRDRSGMN-RLYPQYSFFFEGRGEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRT-NLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCM-------KQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFN 2487
+L++ RG + +QC +VRDR+ + +LYP Y E + ++ A K NRTSNYH+FDM RG S+LSKK GNYLGK+R N R E ++ + +L VSF+K +++ L +G+QPRK +L+ D V P + S LS + K+ NM LL+++EP NGNYRLNF GRV +PSVKNFQ+V ++ +CQFGKV ED FHLD++ P NA +AF ++L QFN
Sbjct: 2 VLVAHPRGVRNQHIQCTVVRDRNSVGGKLYPSYELILEN-PRKTIIKACKMSYNRTSNYHLFDMTRGTAGSKLSKKAGNYLGKLRARNTNRLECSLLNHKADKEELMGVSFEKMTLINQLTEGTQPRKMRILILRPDVVTG-TTEGVYPSNFGSPSLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA) HSP 1 Score: 184 bits (468), Expect = 7.650e-48 Identity = 106/235 (45.11%), Postives = 146/235 (62.13%), Query Frame = 1
Query: 1798 LVQCVIVRDRSGMNRLYPQYSFFFEGRGEQLMMVAQKCGKNRTSNYHVFDMKRGGFRS--RLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPAL--DCDGAPAAHKVDPYDADSDMLSCMKQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
L + IVR G NRL PQY FF + + L+++AQK KNRTSNYH+FDM G + +LSKK+GNY+GK+R+ R E + +S E +LGA++F+ S+PRK +V+ P L D D KVD + S ++ +K G+ ++ +L+++EP Y G YRLNF+GRV+VPSVKNFQLV + QFGKV + FHLD+R P+ FQAF I+L QFNF
Sbjct: 127 LTEGSIVRCNQGANRLTPQYQFFVKNK---LVLLAQKQLKNRTSNYHIFDMSCGTVAASHKLSKKSGNYIGKLRSCFGRHENVMISSQEEKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSF---SSLVEQLKLGQTSDLIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALCQFNF 349
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Match: T0Q607_SAPDV (Tub domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0Q607_SAPDV) HSP 1 Score: 185 bits (469), Expect = 9.680e-48 Identity = 103/231 (44.59%), Postives = 142/231 (61.47%), Query Frame = 1
Query: 1798 LVQCVIVRDRSGMNRLYPQYSFFFEGRGEQLMMVAQKCGKNRTSNYHVFDMKRGGFRSRLSKKNGNYLGKVRTNLKRTEATIFTSDREIAQLGAVSFDKPGIMDHLRDGSQPRKFSVLLPALDCDGAPAAHKVDPYDADSDMLSCMKQGRHGNMFLLQSREPTYTNGNYRLNFHGRVTVPSVKNFQLVSPDDLLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 2490
L + IVR G NRL PQY FF + + L+++AQK NRTSNYH+FDM RG +LSKK+GNY+GK+R++ R E + ++ E +LGA+ F+ S+PRK +V+ P L G A DA S + +K GR ++ +L +++P Y G YRLNF+GRV+VPSVKNFQLV + QFGKV + FHLD+R P+ FQAF I+L+QFN+
Sbjct: 150 LTEGSIVRCNHGANRLTPQYQFFIKNK---LVLLAQKQLNNRTSNYHIFDMSRGAASYKLSKKSGNYIGKLRSSFGRQENVMISAQAEKRELGAILFETK------TSHSKPRKLTVICPGLTSSGE-AKSVPSKGDAFSSLAEQVKLGRTSDLVILDNKDPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPMTPFQAFSIALSQFNY 370 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15.3763.1 >prot_H-canaliculatus_F_contig15.3763.1 ID=prot_H-canaliculatus_F_contig15.3763.1|Name=mRNA_H-canaliculatus_F_contig15.3763.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=518bp MVTPRWETDRLPLDARDGARDENRLPGTQDSEVECYSQKPAAGSISTHSVback to top mRNA from alignment at H-canaliculatus_F_contig15:74411..79921- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15.3763.1 ID=mRNA_H-canaliculatus_F_contig15.3763.1|Name=mRNA_H-canaliculatus_F_contig15.3763.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5511bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:74411..79921- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15:74411..79921- >mRNA_H-canaliculatus_F_contig15.3763.1 ID=mRNA_H-canaliculatus_F_contig15.3763.1|Name=mRNA_H-canaliculatus_F_contig15.3763.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3108bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:74411..79921- (Hapterophycus canaliculatus Oshoro5f female)back to top |