mRNA_H-canaliculatus_F_contig15.3761.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: D7FYS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS3_ECTSI) HSP 1 Score: 155 bits (393), Expect = 1.560e-45 Identity = 79/111 (71.17%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 10 TPTTTATPPSINEVQVSGRGVLSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDAATGAQ 342
T TT + + EV++ GR E +W VGIGGGLWSTGILLTEHLAKH ALYD VF+GKRVLELGSGTGL GLAAARFGPPLEVVITDLESHVDIC+RN GAQ
Sbjct: 5 TAATTTSTSEVKEVELDGRXXXXXEVNWGVGIGGGLWSTGILLTEHLAKHAALYDRVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVASQDDMGAQ 115
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A2D4BZQ6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ6_PYTIN) HSP 1 Score: 91.3 bits (225), Expect = 4.110e-20 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 73 LSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRN 312
L+ +CDW VGIGG +W++G +LT HL H Y +F+GK V+ELGSGTG GL AA P +VV+TDL SH+D +RN
Sbjct: 34 LAFQCDWDVGIGGSVWTSGEILTAHLEMHQEQYREIFQGKSVVELGSGTGYVGLLAAACFQPAQVVLTDLASHLDCMQRN 113
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A1V9ZYN4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYN4_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 7.500e-20 Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 61 GRGVLSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDAATGAQARLPS 357
G + LEC+W VGIGG LW++G LL ++L+++G + + G RVLELGSGTGL GLA A FGP VV+TDLE+HV N R+A R+PS
Sbjct: 10 GDSSIELECNWDVGIGGSLWTSGRLLVDYLSRNGVVRQEI-EGTRVLELGSGTGLVGLAVALFGPA-SVVLTDLETHVAALENNVKRNAG-----RIPS 101
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A024GDA2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDA2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.520e-19 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 73 LSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRD 324
L ECDW+VGIGG +W++G +LT + +H D +F+GKRV+ELGSGTG+ GL A P +V++TDL S +D R N R+
Sbjct: 23 LLFECDWSVGIGGSVWTSGEILTSYFKRHREHLDTLFQGKRVVELGSGTGIVGLTCAACFQPSQVILTDLSSQLDCLRNNVTRN 106
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A8K1C330_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C330_PYTOL) HSP 1 Score: 85.5 bits (210), Expect = 7.620e-18 Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 73 LSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDA 327
L +CDW +GIGG +W++G +LT HLA Y ++F+ K V+ELGSGTG GL A P +V++TDL+SHV+ + N R+A
Sbjct: 40 LQFQCDWDIGIGGSVWTSGEILTAHLASQQEHYRSIFQDKVVVELGSGTGFVGLMTAVCFQPSDVIVTDLQSHVECLQHNITRNA 124
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: K3WJ30_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJ30_GLOUD) HSP 1 Score: 85.1 bits (209), Expect = 8.560e-18 Identity = 43/87 (49.43%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 70 VLSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDAA 330
VL CDW +GIGG +W++G +L EHL A Y +F+GK VLELGSGTG GL A P V +TDL SHV RN +A+
Sbjct: 37 VLRFHCDWDIGIGGSIWTSGQILAEHLQSQQARYRALFQGKNVLELGSGTGYVGLMTAVCFEPANVFLTDLASHVACLERNVALNAS 123
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A024U3Y6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3Y6_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.690e-17 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 49 VQVSGRGVLSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDAA 330
V + + LECDW VGIGG LW++G LL +++A++ ++ G+ VLELGSGTGL GLA A GP V++TDL++HV RN R+A+
Sbjct: 15 VSTTSSACIELECDWGVGIGGSLWTSGRLLVDYMARNTHEQKDLV-GRTVLELGSGTGLVGLAMAHMGPS-RVIVTDLDTHVASMERNLERNAS 106
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A0N7L6P2_PLAHL (Putative N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6P2_PLAHL) HSP 1 Score: 83.6 bits (205), Expect = 6.240e-17 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 70 VLSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDAA---TGAQARL 351
+L EC+W GIGG +W++G+LL HL + Y +F G RV+E+GSGTG GL A P V +TDL +HV+ +RN R+A TG Q +
Sbjct: 58 MLGFECNWKPGIGGSIWTSGVLLAAHLELYREYYRTIFEGARVVEIGSGTGYVGLMVAACFRPAHVYLTDLSTHVNGLQRNVERNARAVRTGVQVHV 154
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A485KXL0_9STRA (Aste57867_13220 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXL0_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 9.150e-17 Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 73 LSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDAATGAQARLPS 357
+ LEC+W VGIGG LW++G LL ++++++ A + G+ VLELGSGTGL GLA + GP V++TDL SHV+ RN R+ ++R+PS
Sbjct: 25 IELECNWNVGIGGSLWTSGRLLVDYMSRN-APEQHALAGRTVLELGSGTGLVGLAMSLLGPT-RVILTDLHSHVESMERNLARN-----KSRIPS 112
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Match: A0A7R9UE36_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE36_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.410e-16 Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 73 LSLECDWAVGIGGGLWSTGILLTEHLAKHGALYDNVFRGKRVLELGSGTGLAGLAAARFGPPLEVVITDLESHVDICRRNAGRDAATGAQA 345
L LE DW+VGIGGG+WS+ L H Y G+RVLELG+GTGLAG AA P E+V++D+ HV + RRN ++ T Q+
Sbjct: 23 LQLELDWSVGIGGGVWSSAEQLVAHFEAQQETYRQTLHGRRVLELGAGTGLAGFGAALVSPLSELVLSDVGEHVTLLRRNVEQNFDTLTQS 113 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15.3761.1 >prot_H-canaliculatus_F_contig15.3761.1 ID=prot_H-canaliculatus_F_contig15.3761.1|Name=mRNA_H-canaliculatus_F_contig15.3761.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=120bp AAATPTTTATPPSINEVQVSGRGVLSLECDWAVGIGGGLWSTGILLTEHLback to top mRNA from alignment at H-canaliculatus_F_contig15:59575..60692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15.3761.1 ID=mRNA_H-canaliculatus_F_contig15.3761.1|Name=mRNA_H-canaliculatus_F_contig15.3761.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1118bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:59575..60692- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15:59575..60692- >mRNA_H-canaliculatus_F_contig15.3761.1 ID=mRNA_H-canaliculatus_F_contig15.3761.1|Name=mRNA_H-canaliculatus_F_contig15.3761.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=720bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:59575..60692- (Hapterophycus canaliculatus Oshoro5f female)back to top |